Strigops habroptila (Kakapo): 115604896
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Entry
115604896 CDS
T08851
Symbol
POLR3B
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03020
RNA polymerase
shab04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115604896 (POLR3B)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
115604896 (POLR3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shab03021
]
115604896 (POLR3B)
Enzymes [BR:
shab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115604896 (POLR3B)
Transcription machinery [BR:
shab03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
115604896 (POLR3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
115604896
NCBI-ProteinID:
XP_030334332
LinkDB
All DBs
Position
3:72966507..73041518
Genome browser
AA seq
1132 aa
AA seq
DB search
MEALATELGALTPEQAAAPVNTVEEKWRLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKVTSDADPMWYLKYLNIYVGTPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILI
QEQLSKNRIIVEADRKGTVGASVTSSTHEKKSRTNMVVKQGRFYLKHNTLSEDIPIAIIF
KAMGVESDXEIVQMIGTEEHVMAAFAPSLEECQKAQIFTQMQALKYIGNKXRRQRMWGGP
KKTKMEEARELLASTILTHVLVKEFNFRAKCIYTAVMVRRVILAQGENKVDDREYYGNKR
LELAGQLLSLLFEDLFKNLILNXEKMADQVIPNNVQLSLIVVKHMRQDQITNGWSNFIPX
GNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITTDMEDGPIIKLASNLGVEDVNLLCGEELSYPNVFLVFL
NGNILGVIRDHQKLVNTFRIMRRAGYINEFVSISTNLSDRCVYISSDGGRLCRPYIIVKK
QKPAVTNKHMEELAQGYRNFEDFLHEGLVEYLDVNEENDCNIALYEHTINKDTTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQKPMVK
TKTIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLKR
YTNQTFDKVMGPMLDAATRKPIWRHEILDADGICSPGEKVENKQVLVNKSMPTVTQTPLE
GSGVPQQPQYKDVPVTYKGATDSYIEKVMISSNAEDAFLIKMLLRQTRRPEIGDKFSSRH
GQKGVCGLIVPQEDMPFCDTGICPDIIMNPHGFPSRMTVGKLIELLAGKAGVLDGRFHYG
TAFGGSKVKDVCEDLIRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMH
ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG
QCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLAKYNE
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgctggccacggagctgggggccctgaccccggagcaggcggcggctcccgtg
aacacggtggaggaaaaatggagacttcttccagcatttctgaaggtgaaaggacttgtg
aagcagcacatagactcattcaactatttcatcaatgtagagataaagaagatcatgaag
gccaatgaaaaagttacaagtgatgctgacccaatgtggtacttgaagtacctcaatatc
tatgttggtactccagatgtagaagaaagcttcaatgtgacacgacctgtatcgcctcat
gagtgccgcctgcgagacatgacttactctgccccgattacagtggacattgaatataca
cgaggaagccagaggatcatacgcaatgcattgcctattggcagaatgcctatcatgttg
cgtagctccaactgtgttcttacggggaaaactccagcagaatttgccaaacttaatgaa
tgtcctttagatccaggtggttatttcattgttaaaggtgtagagaaagtcattcttatt
caagagcagctatccaaaaacagaatcatagtggaagcagatagaaaaggcacagttggc
gcttctgttaccagttccactcatgagaagaagagcagaacgaatatggttgtgaaacaa
ggaagattttacctgaagcacaacactctgtcagaagatattcccattgctatcatattt
aaggccatgggtgttgagagtgacncagagattgtacagatgattggcacagaggaacac
gtgatggctgcatttgctcctagtctggaagaatgccaaaaagctcagatttttacccag
atgcaggcactgaagtacattggaaacaagntacgaaggcaaaggatgtggggaggccca
aagaaaacaaagatggaagaagcacgagagctgctagcatcaactattctgacccacgtt
cttgtgaaggaattcaattttcgtgccaagtgcatatacacagctgtgatggtgcgcaga
gtaattttggctcaaggagaaaataaagtagatgacagagaatactatggaaataaacgt
ttggagttggcagggcagcttctttctctcctatttgaagatttattcaaaaatttaatt
ctgaacnntgaaaagatggctgaccaggtaatccccaacaacgtgcagctcagtttgatt
gtcgtgaagcatatgcgtcaagaccagatcaccaatggatggagtaattttattccatag
ggaaactggtctctgaagagattcaaaatggaccgccaaggcgtgacacaagtattgtcc
cgcttgtcttatatatctgctctgggaatgatgactagaatctcttctcagtttgaaaag
acaaggaaagtgagtggtcctcggtcactacaaccatctcaatgggggatgctctgccca
tctgacactcctgaaggagaggcttgtggtttggttaaaaaccttgccctcatgactcat
attactacagatatggaagatggtccgattattaaattagccagtaatcttggagttgaa
gatgtcaacttgctctgtggtgaagaactttcatatccaaacgtgttccttgttttcctt
aatggtaacatcctcggtgtcatacgtgatcatcagaaattagtcaacacatttcggata
atgcgtcgggcgggttatatcaatgaatttgtttccatttctacaaatctttctgacaga
tgtgtctacatttcctctgatggagggagattgtgcagaccctacataattgtcaagaag
caaaaacctgcagttacaaacaagcacatggaagaactggctcagggatacaggaatttt
gaagacttcttgcacgaaggccttgttgaatatttggatgtgaatgaagaaaatgactgt
aacattgcgttgtatgaacatacaattaataaagatacaacacatttggagattgagcct
ttcacacttcttggtgtctgtgccggactgattccatatcctcaccacaaccagtcccca
aggaacacttaccagtgtgccatggggaaacaagcaatgggtactattggatacaaccaa
agaaacaggatagatactctcatgtaccttctagcctatccacaaaagccaatggtaaaa
acaaagacaatagaactgatagattttgagaaactgcctgctggacagaatgccacagtc
gctgtgatgagctacagtggttatgatattgaagatgctcttgtcttaaacaaggcctct
ttggacagaggttttggaaggtgtcttgtatataagaatgccaagtgtacactgaagcgc
tatacaaaccagacatttgataaagtcatgggtccaatgttggatgcagctactcgtaaa
ccaatctggcgccatgaaattttagatgctgatggtatctgctctccaggtgagaaagta
gaaaataagcaagtccttgtgaacaaatcaatgccaactgtgacccagacgcctctggaa
ggaagtggtgtgcctcagcagccacagtacaaagatgtgccagtaacctacaaaggtgca
actgattcttatattgaaaaagtaatgatttcatcaaatgcagaggatgctttcttgatc
aaaatgttgttgaggcaaactagacgtccagaaattggagataaatttagcagtcgtcat
gggcagaaaggggtgtgtggactgattgttcctcaggaagacatgccgttttgtgataca
ggaatctgtccagatatcataatgaaccctcatggcttcccatcacgtatgacggtagga
aagttaattgaactcctggcaggaaaggctggggtccttgatggcaggtttcactatgga
acagcttttggaggcagtaaagttaaggatgtgtgtgaagaccttattcgacatggttat
aactacctagggaaggactacgtaacatctggtatcactggggagcctttggaagcatat
atctattttggccctgtgtattaccagaaactaaagcacatggtgttggataaaatgcat
gcaagagctcgaggacccagagcggtgctcaccaggcaacccactgaaggtcgatcccgt
gatggtggtttacgtcttggagagatggaacgggattgtttgataggctatggagccagc
atgcttttgttggagagactgatgatttcaagtgatgcctttgaagtggatgtttgtggg
cagtgtggcttgctggggtactctggctggtgccactactgcaaatcatcatgtcatgtg
tcttctctgcgcataccgtatgcctgtaaactcttattccaagaactgcagtcaatgaac
atcatacctaggctaaaactagctaagtacaatgaatga
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integrated database retrieval system
