Strigops habroptila (Kakapo): 115605139
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Entry
115605139 CDS
T08851
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04110
Cell cycle
shab04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115605139 (SMC1B)
04114 Oocyte meiosis
115605139 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shab03036
]
115605139 (SMC1B)
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
115605139 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
115605139 (SMC1B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
AAA_15
rve
Motif
Other DBs
NCBI-GeneID:
115605139
NCBI-ProteinID:
XP_030334964
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Position
3:55827217..55862029
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AA seq
1235 aa
AA seq
DB search
MGYLKLLVMKDFKSWRGHQVIGPFMKFNCIIGPNGSGKSNIMDAVSFVMCEKASNLRVKS
VRELIHGAHVGKPVSSTASVKMIYCEEDGEEKTFSRVIRGNCSEFLFNNKPISRSAYISE
LEKIGVLVKARNCLIFQGTVESIAMKKPRERTQLFEQISNSWEYAEDYERKKKKMHQAEE
DAQFNYNKKKSIAAEHKQAKIEKEEAEHYQTLIKELDEEKIELQLFRLYHNEKNIYFLKK
SLDEKNIEASLKKQSLSTAEDAFRAKKKRFGELNRDQQHMEKELKTLEASLIQQKPLYIK
AKENTSYQIKKVEMSKKLLRDKEKSCDKEKQNIKELEIELDDIEKAWRGFERKAEEILQR
AADIELGESQLERYKELKEVARKKVATLNQQLEKLRWEQKADEERLKLNWRKKKEVEENI
KRTVEQIEEHKKRIEKLEEYAKICTESLAEKKQQEEVLTKEIENSTIRMAEVNEELNKIV
GELRNARMDYHEGRRQQMRAEILESLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKVFSRY
MTAIVVATEKTAKDCIRFLKQERAEPETFLALDYLDVKPINEKLREIKGAKMMVDVVQTP
FAPLKKVIQFVSGNGLVCETVKEAKQIAFDGPVRLKTVALDGTLFLKSGVISGGSSDLRF
KARCWDEKEINTMKERRDSLINELKGLMKIKRKETDLKQLYAQCHGIQTRLKYSQSELEL
IKKKHLANLYTEKSKLESELVNIESQHDMLKEGVAQRKEKIEEFQKKINEVEDSVFQEFC
EEIGIENIRVYDQERVRQQEEIDKRRLEFENQKTRLNIQLEYNRDHLQKLTNAVSKLRET
VRKDEAEITGLQKDEEKLLKKVNEIMEQRQQLKDRLSAHKSEVIKAQNEVEEFRKTVLTL
NREATKLQKEATAIETSLEEKRLRRHNMLLECKLQDLKIKFLSGLLDDISEVELRPETED
TQTTSSIYEREEAIQIDYSSLAEDLKDLDSDKDIQDHLNRMQEEIKSKESTLRKTAAPNL
RAVEKLQIARGKFQESTDAFETSRKKARTCKQEFEQVKKKRYELFSRCFEHASIAIDQIY
KKLCRNSSAQAFLSPENPEEPYLEGISFNCVAPGKRFMPMDSLSGGEKSVAALALVFSIH
SFRPAPFFILDEIDAALDNTNIDKVSSFIREQAHEQLQMIVISLKEEFYSKADALIGVCP
EHDDIMFSRVLTLDLTEYPDTDDQERTETHKRSSE
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgggttacctcaagctgctggtgatgaaggatttcaagtcgtggcgggggcaccaggtt
atcggccccttcatgaagttcaactgcattatcgggcccaatggatcaggaaaatctaac
ataatggatgctgttagttttgtgatgtgtgaaaaggcatctaatttgcgggttaaaagt
gttcgagaacttattcatggagcacatgttgggaaaccagtttcttctacagctagtgtg
aagatgatatattgtgaagaagatggggaagaaaaaacattttcaagagttatccgtggt
aattgttctgaatttcttttcaataataagcctatcagccgatctgcttacatatctgaa
cttgaaaaaataggcgtacttgtcaaagctaggaattgcttgatttttcagggaacagta
gaatcaattgcaatgaagaagccgagggagagaactcaactttttgaacaaatcagtaat
tcatgggaatatgctgaagactatgaacggaaaaagaaaaaaatgcatcaagcagaagag
gatgcacagtttaattacaacaagaagaaaagcattgcagcagaacacaagcaagcaaag
atagagaaagaggaggcagaacattaccagacacttatcaaggaactggatgaagaaaag
atagagttgcagcttttccggctttatcacaatgaaaaaaacatttactttctgaaaaaa
agtttggatgaaaagaatatagaggccagtctcaagaaacagtctctttctacagcagag
gatgcatttagagccaagaagaaaaggtttggtgaactaaacagagaccagcagcacatg
gaaaaagaattgaagactttggaagcatcactgattcagcagaaacccctctatataaaa
gcaaaggagaacacttcctaccaaatcaagaaagtagaaatgtcaaaaaaattgctaagg
gacaaggagaaatcctgtgataaggaaaagcagaacataaaagaactagagatagaatta
gatgacattgagaaggcgtggagaggatttgagaggaaagctgaagaaatattgcagaga
gcagcagatattgagctgggagaaagtcagttggagcgttataaagagctaaaggaagta
gcaagaaagaaagtagctacgctaaaccagcagctagaaaagcttcgttgggagcaaaaa
gcagatgaagaaaggctgaaacttaattggaggaagaaaaaagaagttgaggaaaacata
aaacggactgtggaacagatagaagagcataaaaaacggatagagaagttggaagaatat
gccaagatatgcactgaatcgctagcagaaaaaaagcagcaagaggaagtactaactaag
gaaattgaaaattcaacaatacgaatggctgaagtgaatgaagaattgaacaaaatagtt
ggtgaactgcggaatgccagaatggattaccatgagggaaggcgtcagcaaatgagagca
gagatcctggaaagtctcaaaagactatatccagattctgtgtttggaagactgctcgac
ctgtgtcatcctattcataaaaagtaccagcttgctgttaccaaggtgttcagcagatac
atgactgctattgttgttgccactgaaaaaacagcaaaagattgcattcgcttcctaaaa
caagaacgagctgaacctgaaacttttcttgctctggattaccttgatgttaaaccaatc
aatgaaaagttaagagagataaaaggagctaaaatgatggttgatgttgtacaaactcca
tttgctccactgaagaaagtgattcagtttgtgagtgggaatggcttggtctgtgaaaca
gtgaaagaagcaaaacaaatagcatttgatggaccagtgaggttaaaaacagtggctctt
gatggaactttatttttgaaatctggagtgatttctggaggatcaagtgatttaagattt
aaagctagatgttgggatgagaaagaaataaatacaatgaaagaaagaagagatagcttg
attaatgagctaaagggcttaatgaagatcaaacgtaaggagactgacttgaagcagttg
tatgctcaatgccacggaattcagacacgacttaaatactcacagagtgaattagagctt
attaaaaagaaacatctcgctaatctctacacggagaaatcaaaattggaaagtgaactg
gtaaatattgagtctcagcatgatatgctgaaggaaggagtagcacaaagaaaagaaaaa
atagaagaatttcagaaaaaaattaatgaggttgaagattctgttttccaggaattctgt
gaagaaattggtatagaaaatattcgtgtgtatgaccaagaacgtgtgagacagcaagag
gagattgataagagacgactggagtttgaaaatcagaagacacgactaaatattcagctg
gaatataatcgtgatcatctacagaagttaacaaatgccgtcagcaagttgagggagacc
gttcgtaaagatgaagctgagattacggggctacagaaggacgaggaaaagcttctaaaa
aaagtgaatgaaattatggagcagcggcaacaactgaaggatagattaagtgctcataaa
tctgaggttataaaagcccaaaatgaagttgaagagttcagaaagacggtattaactctt
aatagagaagctacaaaattacaaaaagaagctacagctatagaaacctctctggaagag
aaaagattgagacggcataatatgcttcttgaatgcaaattgcaggacttgaaaataaag
ttcctgtctggattattggatgacatcagtgaagtcgagctacgacctgaaacagaagac
actcagactacatccagtatctatgaaagggaagaggcaattcagatcgactacagcagc
ctagcagaagacctgaaggacctagactctgataaagatatacaggatcatctgaaccgg
atgcaggaggaaataaaatctaaagagagtactttaaggaagacagctgctccaaacctg
agagcagtagagaaactacagatagctcggggcaagttccaagaatcaacagatgctttt
gagaccagcagaaagaaagccagaacatgcaagcaagaatttgaacaagtgaaaaagaag
agatacgagctgttcagccggtgcttcgagcatgcctccatagctatcgaccagatctac
aagaaactttgcagaaacagtagtgctcaggcattccttagtcctgaaaatcccgaggag
ccttacctggaaggcatcagctttaactgtgtggctccaggaaaacgctttatgccaatg
gacagtttgtcaggaggtgaaaaatctgtggcagccctggctcttgtgttttctatacac
agttttcggccagcacctttctttattttagatgagatcgatgctgccctggataacaca
aacatcgataaagtatcaagtttcattagagagcaggcacatgagcagttacaaatgata
gttatttctctaaaggaagagttttattccaaagcagacgcattgattggagtgtgtcca
gagcacgatgacatcatgttcagtcgagtcctgactttggatcttaccgagtatccagac
actgatgatcaggaaagaacagagacgcacaaacgcagttcagaataa
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