Strigops habroptila (Kakapo): 115605171
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Entry
115605171 CDS
T08851
Symbol
PRDM4
Name
(RefSeq) PR domain zinc finger protein 4 isoform X1
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shab03000
]
115605171 (PRDM4)
Transcription factors [BR:
shab03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
115605171 (PRDM4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf_PR_Knuckle
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-met
PyrI_C
Mu-like_Com
Motif
Other DBs
NCBI-GeneID:
115605171
NCBI-ProteinID:
XP_030335046
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Position
3:complement(73550438..73568807)
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AA seq
807 aa
AA seq
DB search
MHPRMNEMNLSPVGMDQLTSSSVSNALPVSGSHLGLAASPTHNAIPAPGLPVAIPNLGPS
LSSLPSALSLMLPMGIGDRGVMCGIPERNYTLPPPPYPHLESSYFRHILPGILSYLADRP
PPQYIHPNTINVDSNPALSVPSNPSALDPYQPSGTVGLEPGIVSMDSRTVNTHGAQNLHP
NDSHEVALDTTITMESVSRVTSPISTDGMAEELTMDDVAGDHSQIPNGSRSHEPLTVDTV
GSNLTSDPVGHGGVIPIHGSTLELPVVMEPDHMAGRVAGIPDSTLNDSIHTVAMSTNSVS
VALSTSHNLASLDSVALHEVGLSLEPVAVSSMNQEVPMGPSHVDVSADNLAFVPSSLQME
DSNSNKENMATLFTIWCTLCDKAYPSDCPDHGPVTFVPDTPIESRARLSLPKQLVLRQSI
MGAEADFGLLLIGVWTRETIPVRTCFGPLIGQQSHSLEVADWTDKAASHIWKIYHNGVLE
FCIITTDENECNWMMFVRKARNREEQNLVAYPHDGKIYFCTSRDIPPEHELLFYYSRDYA
RQLGVPEHPDVHICHCGKECASYADFKAHLSSHIHSHLPSQGHSSSHGPGHGKERKWKCS
MCPQAFISPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLCDK
SFTQKAHLESHMVIHTGEKNLKCDYCEKLFMRRQDLKQHVLTHTQERQIKCPKCDKLFLR
TNHLKKHLNSHEGKRDYVCEKCSKAYLTKYHLTRHLKICKGPTSSLSAPEEEEEEDSEEE
LIDSMRTEDCRINNGVYSTGDALSGHK
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgcaccccagaatgaatgaaatgaacttgagtcctgtagggatggaccagctgacctca
tcctctgtgagcaatgccctgccggtctcagggagtcacttggggttggcagcgtcaccc
actcacaacgccataccagcaccaggcttgcctgttgccattccaaacttgggcccctcc
ttgagttccttgccctctgctctgtctctgatgctcccaatgggtattggggatcgagga
gtgatgtgtggtataccagagagaaactacaccctacctccaccaccataccctcacctg
gagagcagctatttcagacacattctacctggtatcttatcttacttggctgacagacct
ccgcctcagtacatccatcccaacactataaatgtggatagcaatccggcactgtcagtc
cccagcaatccctcagccctagatccctaccagcccagtggaactgtggggctggaacca
gggattgtctccatggactcccgcacagtgaacacccacggtgctcaaaatctgcaccct
aatgacagccatgaggtagcgctggatactacaatcactatggagagcgtatcgagggtc
accagccccatctctacagatgggatggcagaggaacttacgatggatgacgtagccggg
gatcattcgcagatcccaaacggctcccggagccacgaacctttaactgtagacacggtg
gggagtaacttgacatcggaccctgtgggacatggcggtgtcattcccattcacggtagc
actttggaactccctgtcgtcatggagcctgaccacatggctgggcgggtggcaggaata
ccggacagcacactaaatgactccattcatactgtggccatgagcaccaactccgtgagt
gtggcgctctctacctcacacaacctagcttctctggactcagtagccttgcacgaagtg
ggcctcagcctcgagccagtggcagtctcttccatgaatcaagaagtacccatgggccca
agtcacgtggatgtgtctgcagacaatcttgccttcgtaccgtcctctctgcaaatggaa
gattccaattcgaacaaggagaacatggcaaccttgtttaccatatggtgcacactgtgt
gacaaggcatatccatcagactgcccagatcatgggcccgtcacctttgtccctgacacc
ccaatagagagccgagccaggctttctctccctaagcagctcgtccttcggcagtcaatc
atgggagctgaagcggatttcggtcttctactgataggtgtgtggacacgagaaaccatt
cctgtaaggacttgttttggacctttaatcgggcagcagagccattctctggaggtggcc
gactggacagacaaagcagctagtcacatctggaagatctaccacaacggcgtcctggag
ttctgcatcattacaactgatgaaaatgaatgtaactggatgatgtttgtacgcaaagcc
aggaaccgggaagagcagaatctcgtagcttatcctcacgatggaaagatttacttctgc
acctctcgggacatcccacctgaacacgagcttctcttctattacagtcgggactatgca
cgacagcttggcgtacctgaacatccggatgtgcacatctgccactgtggaaaggagtgt
gcttcctacgcggacttcaaggcccatttgagcagccatattcacagccacctccccagt
caggggcacagcagcagccatggaccaggccacggcaaggaaaggaagtggaagtgctcc
atgtgcccccaggctttcatctccccgtccaagctccacgttcatttcatggggcacatg
ggcatgaagccgcacaagtgtgacttctgtagcaaagctttcagtgatcctagcaactta
cggacacacctcaagatacacacagggcagaagaattaccgctgtaccctctgcgacaag
tcgttcacgcagaaggctcacctggagtcgcacatggtcatccacaccggggagaagaac
ctcaagtgcgattactgtgaaaagctgttcatgcggaggcaggacctcaagcagcatgta
ctcactcacacacaagaacggcagatcaagtgccccaagtgtgacaagctgtttctgagg
acaaatcacctgaagaagcatctcaattcacatgaaggaaagagggactatgtctgtgaa
aaatgctccaaggcttatctaaccaaatatcacctcactcgccacttaaaaatatgtaaa
ggccccacatccagcttgtcagccccagaggaggaagaggaggaggattcagaggaggaa
ttaatagactctatgaggactgaagactgtaggattaacaatggagtctattcaactggt
gatgccctctctggacacaaatga
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