Strigops habroptila (Kakapo): 115605248
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Entry
115605248 CDS
T08851
Name
(RefSeq) Werner syndrome ATP-dependent helicase homolog isoform X1
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shab03032
]
115605248
03400 DNA repair and recombination proteins [BR:
shab03400
]
115605248
Enzymes [BR:
shab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
115605248
DNA replication proteins [BR:
shab03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
115605248
DNA repair and recombination proteins [BR:
shab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
115605248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DEAD
Helicase_C
HTH_40
RQC
HRDC
RecQ_Zn_bind
ResIII
SAM_GIDA_C
DUF7043
Motif
Other DBs
NCBI-GeneID:
115605248
NCBI-ProteinID:
XP_030335258
LinkDB
All DBs
Position
3:complement(86698766..86772255)
Genome browser
AA seq
1453 aa
AA seq
DB search
MNKMGLPATNLQNKYPQWMLTQSQEEVSGDKKKSAFQRSVLEDGLPFLEFRGSVVYSYEV
SDCSLLSEDIRQSLSDGAAVGFDIEWPPSYTKGKMAKIAVIQICVSEEKCYLFHISSMSG
FPKGLKRLLEDETIKKVGVGVEGDQWKLMSDFEIKLKSFVELADVANEKLRCKEIWSLNG
LVKHLFGKQLLKDKSVRCSNWKEFPLNEEQKLYAATDAYAGFIIYKKLNNMNNSDQKVLC
GRRDDMGVKEHLTSLAAEITDLASRIPDSSGQLVNVQRAAEIIADISENVTALRSVLFGS
GCPSVLEKSCGTSPTNLEAESSNIEAQEVEMPQLAKQLEGDFNICSDATLAGFWEEDLKE
EAAERGNTVEDRAAAASSKDKADREDFMSLDITEQELQVLEYQAAEEFAKEAAAEEACST
DNEQNLSYVIESDEELEMEMLKSLENVDDAEGALSGRESNKARRSPDAELNISPDGDGDE
DVEEEEEECLDPLLPLPSERHSTCLKTCFGHSSFKPVQWKVINSLLEDRRDNLVVMATGY
GKSLCYQFPPVYTGLTGIVICPLISLMEDQVLQLTMSGIPACLLGSAQSKNIKECIKGGQ
YRVIYMTPEFCSGNLDLLQELDQTIGITLIAVDEAHCISEWGHDFRNSFRTLGSLKKALP
SVPIVALTATASPSIREDIVNCLNLKNPQVTCTSFDRPNLYLEVGQQSGNILRDLKQFLI
RKGSSSAYEFEGPTIIYCPSKKATEQVVSELMKLNVACRAYHAGMGIKQRREAHHQFMRD
EIQCVVATVAFGMGINKADIRMVIHYGAPKEMESYYQEIGRAGRDGLPAACHVLWTASDL
SFNRHLLSEIRNENFRLYKLKMLAKIGKYLVSNSCRRKIILSHFEDKQLRKVSSGIMGTE
DCCDNCRSRVSCFAVPNDFEGGLQDFGKQAYQLLSAVSTLEEKFGTRVPILFLRGSSSQR
LPNRYRRHPLFGSGKDWPENWWKSLCQQLIMEGFLKEVSKYSIFATTCVLTQKGRNWLLK
AGSDSNPSLLLQSSEDLNLQRPSRSSKPLPVPSTQRSPVKKGARQSPAKQMSLYDMFPYE
RKGKTSPGSDNMLNSSVAECSLVRSPLKPSEPVVSSREKELETALYGKLLTARQKIANEK
VIPPAVLATNKILVEMARIRPTTIENVKRIDGVSEAKSTLLIPLMAEIKDFCQENGLQTD
TFSPSGSKDQKEAFPWKHTRALSPSEHVTYVLFQEKNLSVRTISESRSLPLSEVGTHLCQ
ALKAGYPVNLERAGLTPEVHQMISDVIRNPPIESDTTKIQAIRKLVPANIELYLIRMTIA
LLEKEDRNKSWDGSGFKRMLVWSERQEEKTGADQANREDATWSKTKALQSMDGGQPGSGG
AAGGFPKPITPVSPNEPALDPNEEELSADSESKTSQPPFKRKVPEWFGTSAATALPVNQT
KKHRKDTQKGIFS
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaatgggtttgccagctactaatctgcagaacaaatatccgcagtggatgctt
acccaaagccaagaggaagtttcgggtgataaaaagaagtctgcttttcagaggagtgtt
ttggaagatgggctgccattcctagagttccgtggctctgttgtatacagctatgaagtc
agtgactgttccctcctctcagaagatatcaggcaaagtttatcagatggggctgctgtt
ggatttgatattgaatggccaccatcatatactaaaggaaaaatggccaaaatagcagta
atccagatatgtgtatctgaggagaagtgttatttgttccacatctcttccatgtcaggt
tttcccaagggactcaaaagactgcttgaagatgaaacaattaaaaaggttggcgtagga
gttgagggagatcaatggaagctgatgagtgactttgaaatcaaactgaagagctttgtg
gagctggctgacgttgctaatgagaaactgaggtgtaaggagatctggagtctaaatggt
ctggtaaaacacctttttggcaagcagcttttgaaggataagtctgtccgctgtagtaac
tggaaggagtttccactcaacgaggagcaaaaattgtatgcagccacagatgcctatgct
ggttttatcatttacaaaaaactgaacaatatgaataacagtgaccagaaagtactttgt
ggaagaagagatgacatgggtgtgaaggagcacttgacttcactagctgcagaaataaca
gatctggcttctcgcatccctgactcttctgggcaacttgtaaatgtgcagagggctgca
gaaataatagctgacatatcggagaatgtaactgccttaagaagcgtgctgtttggttca
ggttgtccttctgtactggagaagagctgtggcacaagtccaacaaatcttgaagcagag
tcatcaaatattgaagcacaggaagttgaaatgcctcaattagctaaacaacttgaaggt
gacttcaacatctgctctgatgctacccttgctggcttctgggaggaagatcttaaagaa
gaagcagcagagagaggcaacactgtagaagatagggctgcagcagccagctctaaggac
aaagcggacagagaggacttcatgtcactagacattactgagcaggaacttcaggtcttg
gaatatcaggctgcagaagaattcgccaaggaagctgcagctgaggaggcgtgctccaca
gacaatgagcaaaatctttcctatgtcattgaaagtgatgaagaattggaaatggagatg
cttaaatctttagaaaatgtagatgatgctgaaggagctttaagtggaagagagtccaat
aaagccaggagaagtcctgacgcagaattgaacatttcaccagatggtgatggtgatgaa
gatgttgaggaagaagaggaggaatgtttggatccattgctgccactacctagtgaaaga
cacagcacctgtctgaagacatgctttgggcattcttcttttaagccggtccagtggaaa
gtgatcaattctcttctggaagacagaagagataatctcgtcgtcatggcaactggctat
ggaaaaagcttgtgctaccagtttcctcctgtttacactggacttacaggaattgtcatc
tgtcctcttatctccttgatggaggaccaggtgctgcagttgaccatgtcaggtattcca
gcttgcttacttggttcagctcagtcgaaaaacatcaaagaatgcatcaaaggggggcag
tacagagtcatatatatgactccagagttttgttcagggaacttggacttgcttcaggag
cttgatcaaactattggtattaccctcatagctgttgatgaagctcattgcatttctgag
tggggccatgacttcagaaattcctttagaacgttaggctcactgaagaaggctctgcca
tcggttcccattgttgctttaactgcaaccgcaagtccgtcgattagggaggacatagtg
aattgtctgaacctgaagaatcctcaggtcacgtgtactagttttgacagacctaacctg
tacttagaagttggacaacaaagtggaaatatccttagggatttgaagcagttccttatt
aggaaaggaagcagttctgcgtatgagtttgaagggcccactatcatctactgcccttcc
aaaaaagccactgaacaggttgtgtctgaattgatgaaactcaatgtggcctgtcgtgca
taccacgctggtatgggaatcaaacaaaggagagaggcccatcaccagttcatgagggat
gaaattcagtgcgttgtagctacagtggcatttggaatgggcatcaataaagcagatatc
cggatggttattcattacggtgcccctaaggaaatggaatcctattaccaagaaattggg
agagctggtcgtgatgggcttcctgctgcttgtcatgtgttatggactgcatcagacttg
tctttcaacagacatcttctgagcgagatacgcaatgaaaacttccgcttgtacaaactg
aagatgttggcaaaaatagggaagtaccttgtgtcaaatagctgcaggaggaaaattatt
ctgtctcatttcgaagacaaacaactccgaaaggtttcttctggcatcatgggcacagaa
gattgctgtgataactgcaggtccagggtgtcttgttttgcagtccccaatgactttgag
ggtggtttacaggactttgggaagcaagcgtatcagctgctctctgcagtgagcaccctg
gaggagaagtttggaactagagttcccattctgtttcttcgagggtctagttctcaacgc
ttgccaaacagataccgaagacaccctctctttggtagtggaaaagactggccagagaac
tggtggaaatcgctctgccaacagttgataatggaagggttcctcaaagaagtctctaag
tatagcatctttgcaaccacatgcgtgcttacccagaagggtagaaattggctgttaaaa
gctggatctgactcaaatccaagtctcctactgcagtccagtgaagaccttaatcttcag
agaccatctagaagcagcaaacctttacccgtgccctcaacgcagcgctcaccagttaag
aaaggagcaaggcagtctccagcgaagcagatgtctctgtatgatatgtttccatatgag
agaaaaggtaaaacttctccaggaagtgataacatgcttaacagtagtgttgcagagtgc
tcgttggtcagatctcctttgaagccttcagaacccgttgtttcatcccgagaaaaagaa
ttagaaactgctctctatggcaagttgctgactgctagacagaagatagctaatgagaag
gtaattcctccagctgtcttggcaaccaataagatcctggtggagatggcccgaataagg
cctacgacgatcgagaatgtgaagagaattgatggtgtatctgaagcaaaatccaccctg
ttgattcctctcatggctgaaattaaggacttctgccaagaaaatggtttgcagactgac
acattctctccgtctgggtctaaagatcagaaagaagcatttccctggaagcatactaga
gccctctctccctcagagcatgttacgtatgtcctgttccaagagaagaatctctctgtg
aggactatcagtgagagcagatctctgcctctttctgaggttggcactcacctgtgccag
gcgctgaaagccggctaccctgtcaacctggagcgagcaggtttgactcctgaagttcac
cagatgatttctgatgttatccgtaaccctcccattgagtcggacaccactaaaattcaa
gcaattagaaaacttgttcctgcaaatattgaactgtatctcatcaggatgactattgca
ttattggagaaagaggacagaaataagtcttgggatggctcaggcttcaaaaggatgttg
gtgtggtcggaaaggcaggaggaaaaaacaggagcagatcaagcaaacagagaagatgcc
acatggagtaaaacaaaggctttacagagcatggatggtggccagccaggtagtggagga
gcagcaggaggcttcccaaagcccatcacgccggtttcccctaacgagcctgcccttgat
cccaatgaggaggagctgtctgcagactctgagtccaagacctcacagccccctttcaag
aggaaggtgccagaatggtttggaacttcagcagcgacagctctacctgtcaaccaaacc
aagaaacacagaaaagacacccaaaaagggatttttagttga
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