Strigops habroptila (Kakapo): 115605433
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Entry
115605433 CDS
T08851
Symbol
PARPBP
Name
(RefSeq) LOW QUALITY PROTEIN: PCNA-interacting partner
KO
K27412
PCNA-interacting partner
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shab03400
]
115605433 (PARPBP)
DNA repair and recombination proteins [BR:
shab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
115605433 (PARPBP)
TLS (translesion DNA synthesis) factors
Other TLS factors
115605433 (PARPBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
Motif
Other DBs
NCBI-GeneID:
115605433
NCBI-ProteinID:
XP_030335671
LinkDB
All DBs
Position
3:71355831..71406037
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AA seq
585 aa
AA seq
DB search
MTAFQQKILNLIKCFRRQWHLFSSSERTTVCGADCMIMALQLSMAEVNKQKHGDFTVSLS
DLLETWKYLLYDKLGLSYENMKEPENYADMKKAYHAFLARSSMLDLIDIYEKCYGLGLVS
EDESIAPVQLLEFISGIVNVQENCDSVFSTPSTPVNRHGHENVKVTILAKKCVCSYLSLL
VNSKDDLALAHILNVPDRGLDREAFTNLKHASQERKMSIFLMATSFIRTVELGGRGCASS
LFDPLRAHVKGLSNFINFIDKLQEILGEILNPRMAGGRILSTVKMHLIKGRSNGDPFCQA
VEEVVQDLDLKIKNIIDSRHEALTASTTGLSPARPKLHSVNHGTAYCGRDTVKVLLVLLD
EEAVNPPTQNKQNYYMTMKVXNLFGITSVLTLFRSPAQSSGSSPKPLRQRIQKSMNEKKM
TMKQSSIKSQFACTYKSEFSEINCRHFLSSSQIPMCTNPAPKQQLKAGYVTEGMNSCLDV
PVLGTISENVHQTRSYTEMGKLSCQPRNKNSKNEQMDLNNDKVICDKESEPSLQKITKRS
KTSNSPQKELDSKIAGKRKHSKTATKNKLIAGQAKLSHFFRLEFS
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgactgctttccagcaaaaaattttaaacttgatcaagtgtttcagaagacaatggcat
ttattttcaagctctgaaaggactactgtatgtggagcagactgcatgatcatggcatta
caactatcaatggctgaagtcaataagcagaaacatggagatttcacagtatcacttagt
gatttgttggaaacttggaaatacttgttatatgacaaactgggattatcatatgaaaac
atgaaagaacctgaaaattatgctgacatgaaaaaagcctatcatgccttcttagcaaga
agcagtatgctagatctgatagatatatatgagaagtgctatggtcttggacttgtatct
gaagatgaaagcatagctcctgtacaattgttggaatttatttctggaatagtgaatgta
caagaaaactgtgattctgttttttctactccttccacaccagtcaacagacatggccat
gagaatgtgaaggtgacaatcctggcaaagaaatgtgtttgttcatatttaagcctgttg
gtgaattctaaggatgatctggcattggctcatattctgaatgttcctgacagaggactt
gatagagaagccttcactaacctaaaacatgcctcacaggagaggaaaatgtccattttc
ctgatggcaacatcctttatccgaactgtagaacttggaggaagaggctgtgcatcttca
ttatttgatcctttaagagctcatgtaaagggattatcaaacttcattaattttattgat
aagctgcaggagattcttggggaaatcttaaatccaagaatggcaggggggcgaattctg
tcaacagtgaagatgcatttgataaaaggccgaagcaatggggatcctttctgtcaggca
gtagaggaagttgtacaagatttggatttgaagattaaaaatattatcgattcacgacat
gaagccttgactgccagcactactggacttagtccagcacggccaaaattgcattctgta
aatcacggtactgcgtattgtggcagagatactgtaaaggtcttactagttcttctggat
gaagaagctgtcaatcctcccacccagaacaagcagaactattatatgacaatgaaagtt
nngaatttgtttggtatcacctctgttttgacactcttcagatctccagcacaatccagt
ggatcttctccgaaacctctcagacaacgtattcagaaatctatgaatgaaaaaaaaatg
acgatgaagcaatcttcaatcaaatctcagtttgcatgtacatataaaagtgagttcagt
gaaataaattgtcggcatttcctcagcagtagccaaattccaatgtgcacaaatcctgca
ccaaagcaacaattaaaagctggatatgtcacagaaggtatgaattcatgtcttgatgta
ccagtgcttggaactatttctgaaaatgttcaccagactagaagttatacagaaatggga
aagctcagttgtcagccaagaaacaagaactccaagaatgaacagatggatttgaataat
gacaaagtaatctgtgataaggaaagtgaaccatctttgcaaaaaattactaaaagatct
aagacttcaaacagtcctcagaaggaattggacagcaaaattgctggaaaaagaaaacac
agcaaaactgcaaccaagaataagttgattgctggtcaggcaaaattatctcactttttt
cgactggaatttagctga
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