KEGG   Strigops habroptila (Kakapo): 115605494
Entry
115605494         CDS       T08851                                 
Symbol
OPTN
Name
(RefSeq) optineurin isoform X1
  KO
K19946  optineurin
Organism
shab  Strigops habroptila (Kakapo)
Pathway
shab04137  Mitophagy - animal
shab04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:shab00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    115605494 (OPTN)
   04137 Mitophagy - animal
    115605494 (OPTN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:shab04131]
    115605494 (OPTN)
Membrane trafficking [BR:shab04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    115605494 (OPTN)
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    115605494 (OPTN)
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    115605494 (OPTN)
  Xenophagy
   Cargo receptors
    115605494 (OPTN)
SSDB
Motif
Pfam: CC2-LZ NEMO zf_C2H2_10 EDR4-like_1st
Other DBs
NCBI-GeneID: 115605494
NCBI-ProteinID: XP_030335854
LinkDB
Position
3:7159110..7179357
AA seq 568 aa
MEQPRLVDASEMSSKLKSRPAENGEHPKRKMENGTDSVAAPALSTYTPEEMVQQMKELIT
ENSELKEAMKLHNQAMKDRYEELSIWREKQKEEREFFELKFKEAKQCLLAKCIENEQLQQ
QLQSLKEKEEGAAMEGCTALEKEATQLKSQLQRLQAEKADLLAIISELHIKLNMASAEDS
FVQIAMNEEEMKRTAKEHQENSDEVTSNVAVYIRSKSADESKNLESEELTVSQLLCCLRN
ETQKREKLEKDLQDHKERLSKLEKESSNCLESGTQTEQEEESSEAVGSEVEALNLQVCAL
FKELQEAHEKLKEAELIQKKLQEKCQVLERKSSAAAAELEEKHQLIYTVKKLELQVESMQ
AEVKLEQAKTHEEKVRYSSLQDAYSKVLPELTEAMRTIDQMKLKELDRVDKVVVEQLTAK
VELAEQALAAKQLQIDEMKQIIAKQEEDLETMAVLRAQMEVYCSDFHAERAAREKIHEEK
EQLAVQLAYLLKEQQNLEDLSRNSLAEMQSRHGARAPDREHSPRLVQRGTASQDWPEQRN
ISIYSCPKCEEILPDLDTLQIHVMDCIN
NT seq 1707 nt   +upstreamnt  +downstreamnt
atggagcagccgcgactggtagatgcttcagagatgtccagcaagttgaagagccgtcct
gctgaaaatggagagcatcccaagagaaaaatggaaaatgggacagacagcgtggctgcc
cctgcccttagcacctacaccccagaggagatggtacaacaaatgaaagaactaatcact
gagaacagtgagttaaaagaagccatgaagttgcataaccaagctatgaaggaccggtat
gaggagctttccatctggcgagagaagcagaaagaagaaagagaattttttgagttgaag
tttaaggaggctaagcagtgcttgctagccaagtgcattgaaaatgaacagctacagcaa
cagcttcagagcttaaaggaaaaagaagaaggagctgcaatggagggctgcacggctctc
gagaaggaagcaactcagctgaagtcccagttgcagcggctccaggctgagaaggcagat
ctgctggctatcatttcagaactgcatatcaagctgaacatggcctcagcagaggattcc
tttgtgcagattgcaatgaatgaagaagaaatgaaaagaactgcaaaggaacatcaagag
aatagtgatgaagtgaccagtaatgttgctgtctacatcagaagcaaatctgcagatgaa
tctaagaatttggagtctgaggagctaacggtgagccagctgctctgctgccttagaaat
gaaactcagaagagggaaaaacttgagaaggacctgcaggatcacaaggagagactgtca
aagctggagaaggaaagcagcaactgcctggagagtgggacacaaactgaacaggaagag
gagagttcagaggctgttggcagtgaagtagaagctctgaatttgcaagtttgtgctctg
tttaaagagcttcaggaagcccatgagaagttaaaagaagcagaattgattcagaagaag
cttcaagaaaagtgccaagtactggaaagaaagagctcggctgctgcagcagaattggag
gagaagcatcagctaatatacaccgtcaagaagctggaacttcaggtggagagcatgcag
gcagaggtcaagctggaacaagccaagacacatgaggagaaggtaaggtacagcagcttg
caggatgcatatagcaaagtccttcctgaactcactgaggcaatgagaacaatcgatcag
atgaaactcaaagagctggacagagtggataaagtggtggtggagcaactaactgcaaag
gtggagttggcagaacaagcccttgctgcaaagcagctccagatagatgaaatgaagcag
ataattgctaagcaagaggaagaccttgaaaccatggctgtgctccgtgctcagatggag
gtttattgttctgatttccatgctgagagggcagcaagagagaagatccatgaggagaag
gagcagttggctgtccagttggcgtacctgctgaaagagcagcaaaaccttgaagatctt
agccgaaactctttggcggagatgcagagtcgtcacggagccagggcaccggatcgggag
cactcacctcgccttgtccaaagaggaactgctagtcaagactggccagagcaacggaat
atttcaatatattcatgtcccaaatgtgaagaaattctacctgatctggacacgctgcag
attcatgttatggactgcattaactga

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