Strigops habroptila (Kakapo): 115605494
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Entry
115605494 CDS
T08851
Symbol
OPTN
Name
(RefSeq) optineurin isoform X1
KO
K19946
optineurin
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04137
Mitophagy - animal
shab04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115605494 (OPTN)
04137 Mitophagy - animal
115605494 (OPTN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115605494 (OPTN)
Membrane trafficking [BR:
shab04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115605494 (OPTN)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
115605494 (OPTN)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
115605494 (OPTN)
Xenophagy
Cargo receptors
115605494 (OPTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
EDR4-like_1st
Motif
Other DBs
NCBI-GeneID:
115605494
NCBI-ProteinID:
XP_030335854
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Position
3:7159110..7179357
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AA seq
568 aa
AA seq
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MEQPRLVDASEMSSKLKSRPAENGEHPKRKMENGTDSVAAPALSTYTPEEMVQQMKELIT
ENSELKEAMKLHNQAMKDRYEELSIWREKQKEEREFFELKFKEAKQCLLAKCIENEQLQQ
QLQSLKEKEEGAAMEGCTALEKEATQLKSQLQRLQAEKADLLAIISELHIKLNMASAEDS
FVQIAMNEEEMKRTAKEHQENSDEVTSNVAVYIRSKSADESKNLESEELTVSQLLCCLRN
ETQKREKLEKDLQDHKERLSKLEKESSNCLESGTQTEQEEESSEAVGSEVEALNLQVCAL
FKELQEAHEKLKEAELIQKKLQEKCQVLERKSSAAAAELEEKHQLIYTVKKLELQVESMQ
AEVKLEQAKTHEEKVRYSSLQDAYSKVLPELTEAMRTIDQMKLKELDRVDKVVVEQLTAK
VELAEQALAAKQLQIDEMKQIIAKQEEDLETMAVLRAQMEVYCSDFHAERAAREKIHEEK
EQLAVQLAYLLKEQQNLEDLSRNSLAEMQSRHGARAPDREHSPRLVQRGTASQDWPEQRN
ISIYSCPKCEEILPDLDTLQIHVMDCIN
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggagcagccgcgactggtagatgcttcagagatgtccagcaagttgaagagccgtcct
gctgaaaatggagagcatcccaagagaaaaatggaaaatgggacagacagcgtggctgcc
cctgcccttagcacctacaccccagaggagatggtacaacaaatgaaagaactaatcact
gagaacagtgagttaaaagaagccatgaagttgcataaccaagctatgaaggaccggtat
gaggagctttccatctggcgagagaagcagaaagaagaaagagaattttttgagttgaag
tttaaggaggctaagcagtgcttgctagccaagtgcattgaaaatgaacagctacagcaa
cagcttcagagcttaaaggaaaaagaagaaggagctgcaatggagggctgcacggctctc
gagaaggaagcaactcagctgaagtcccagttgcagcggctccaggctgagaaggcagat
ctgctggctatcatttcagaactgcatatcaagctgaacatggcctcagcagaggattcc
tttgtgcagattgcaatgaatgaagaagaaatgaaaagaactgcaaaggaacatcaagag
aatagtgatgaagtgaccagtaatgttgctgtctacatcagaagcaaatctgcagatgaa
tctaagaatttggagtctgaggagctaacggtgagccagctgctctgctgccttagaaat
gaaactcagaagagggaaaaacttgagaaggacctgcaggatcacaaggagagactgtca
aagctggagaaggaaagcagcaactgcctggagagtgggacacaaactgaacaggaagag
gagagttcagaggctgttggcagtgaagtagaagctctgaatttgcaagtttgtgctctg
tttaaagagcttcaggaagcccatgagaagttaaaagaagcagaattgattcagaagaag
cttcaagaaaagtgccaagtactggaaagaaagagctcggctgctgcagcagaattggag
gagaagcatcagctaatatacaccgtcaagaagctggaacttcaggtggagagcatgcag
gcagaggtcaagctggaacaagccaagacacatgaggagaaggtaaggtacagcagcttg
caggatgcatatagcaaagtccttcctgaactcactgaggcaatgagaacaatcgatcag
atgaaactcaaagagctggacagagtggataaagtggtggtggagcaactaactgcaaag
gtggagttggcagaacaagcccttgctgcaaagcagctccagatagatgaaatgaagcag
ataattgctaagcaagaggaagaccttgaaaccatggctgtgctccgtgctcagatggag
gtttattgttctgatttccatgctgagagggcagcaagagagaagatccatgaggagaag
gagcagttggctgtccagttggcgtacctgctgaaagagcagcaaaaccttgaagatctt
agccgaaactctttggcggagatgcagagtcgtcacggagccagggcaccggatcgggag
cactcacctcgccttgtccaaagaggaactgctagtcaagactggccagagcaacggaat
atttcaatatattcatgtcccaaatgtgaagaaattctacctgatctggacacgctgcag
attcatgttatggactgcattaactga
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