Strigops habroptila (Kakapo): 115605624
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Entry
115605624 CDS
T08851
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115605624 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shab04121
]
115605624 (NHLRC1)
Enzymes [BR:
shab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115605624 (NHLRC1)
Ubiquitin system [BR:
shab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115605624 (NHLRC1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
115605624
NCBI-ProteinID:
XP_030336248
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All DBs
Position
1:complement(92031691..92035736)
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AA seq
447 aa
AA seq
DB search
MARYRGACADLAGVEPRRRARGGGTPAGSAAAHPQGAPARRSCATPRPARAARPGLPAAG
MAAEDEAELGLLECRVCFERYGHGGQRRPRNLPCGHVLCRGCVEALGGPDRRRLECPFCR
RACGSAETSDCLPLLQLLEVLGPAGHSIPSALGRSGGRGAAGPGPAGLGLRLSLGGWGSL
VNPTGVAACRRSGRLAVAHDGKKRIHVFGPGGSCLQQFGERGDAGNDIKYPLDVTVTSDG
HVVVTDGGDCSVKAFDFEGRGVLAVREGFCLPWGLDATPDSEVILTDSEAGALYRLTADF
KTRKLRKCQMIQSRLISPRGVAVSQTSGAIVVIEHLKAQGPNSSSTRVKIFSAQMDLVGQ
MDSFGLNLVFPSKIYTTAVAFDKEGHVVVTDICSQAVICLGKPEEFPIFNPLISHGLYYP
VGLTYMANNSLVVLDSGDHSIKIFSST
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggtaccggggcgcctgtgcggatctggcgggtgttgaaccgcggaggagggcc
cggggcggagggacccccgccggcagcgccgcagcccacccacagggggcgcccgcccgc
cgcagctgcgcaacgccccgccccgcccgcgccgcccggcccggcctccctgcggcgggc
atggcggcggaggatgaggcggagctggggctgctggagtgccgggtgtgcttcgagcgg
tacggccacggcgggcagcggcggccgcgcaacctgccttgtgggcacgtcctctgccgg
ggctgcgtggaggccctaggtggccccgatcgccggcggctggagtgccccttctgccgg
cgggcctgcggctccgccgagaccagcgactgcctgccgctgctgcagctgctggaggtc
ctgggccccgccggccacagcatcccctcggccctgggcaggagcggcggccgaggggcg
gccgggccgggccccgcgggcctcggactccggctgtcgctggggggctgggggtcgctg
gtcaaccccactggggtggcagcctgccggaggtcggggcgcctggcagtggcacatgac
ggcaagaagaggatccacgtctttgggccgggtggatcctgcctgcagcagttcggggag
cggggggacgcgggcaacgatatcaagtacccgcttgatgtgacggtcacatcagacggg
cacgtggtggtcactgatggtggggactgctccgtgaaggcctttgatttcgagggaagg
ggggtcctggctgtccgggaaggtttctgtttgccctggggcttggatgccaccccggac
agcgaagttatcctgaccgactcggaggcaggtgctctgtaccgcttgacggccgacttc
aagacgcggaaattacggaagtgtcagatgatccagtctcggctcatcagcccaagaggg
gttgcagtctcccagacctcgggtgctatcgtggtaatagagcacctgaaagctcaagga
ccgaacagcagcagcacccgagtgaagatattcagtgcacagatggatcttgtcggccag
atggatagctttggtctgaaccttgttttcccttccaaaatatatactacggctgtggcc
tttgacaaagagggtcatgttgtagtaactgatatctgtagtcaggctgtaatatgctta
gggaaacctgaggagtttcccatctttaaccctctaattagccatgggctttattatcct
gtaggactgacttacatggcaaacaactcccttgttgttttagacagcggtgatcattca
ataaaaatatttagctccacctga
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