Strigops habroptila (Kakapo): 115605744
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Entry
115605744 CDS
T08851
Symbol
DCP1B
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115605744 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115605744 (DCP1B)
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115605744 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
115605744 (DCP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
115605744
NCBI-ProteinID:
XP_030336466
UniProt:
A0A672VD78
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Position
3:65377370..65424343
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AA seq
607 aa
AA seq
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MAAAVAGAALLGKGLDISLAALQQQDPYISSIVDVASQVALYTFGHRANEWEKTDVEGTL
FVYTRSASPRHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEE
CQRIAELMKNLTQQEQFKAKQGMGTGVSPMIMNSANNKEVDILRMLTKAKDEYTKCKTCS
EPKQITSSSAIYNNPNLIKPIPVKPSENQQQRASQQSKNVDPEPQHLSLTALFGKQEKTD
VSEPLNKQHQENLPVRQGVVRSLSYEEPSRHSPSAEKQLCPAIQKLMVRGTDLHPLAEFP
ENRLCENGNIHPVGETFTGLFQPVTSHGIAASHVVQDTAGTQSLLQKLQSQSGTVTKMDA
NAIGSVNSTASVFSRTPAPVGAPAGTVNNMSQPPLVYFNGSLPGQTLESQTVGKEQSKLP
RQPLSLSGNQAASSGVISPQELLKKLQIVQQEQQLHVSSRPTLAAKFPVVTQNTNTLKPL
DSWIEKAPGAEKQSALFQVISPQRIPATVTPTLLMSPMVFTQSTSAPPKANESGQLAAAN
QEPAASSANLLLPLQNPEPSVVNSSSMTKMQLQETLLHLIQNDDNFLNIIYEAYLFSVRK
AAMKKSM
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggtggccggggccgccctgctgggcaaggggctggacatcagcctggcg
gcgctgcagcaacaggacccctacatcagcagcatcgtggacgtggccagccaggtggcg
ctatacaccttcgggcaccgcgccaacgagtgggagaagactgatgtggagggaacactg
tttgtttacacaagatcggcttctccaaggcatggttttacaattatgaacagactgagc
atggaaaatcgaacagaaccaattactaaagacctcgatttccagctgcaggaccctttt
ctactgtacagaaatgccagattgtccatatatgggatttggttttatgataaagaagaa
tgccaaagaattgcagagctcatgaaaaacctaactcaacaggaacaattcaaagcaaag
cagggcatgggcacaggagtatccccaatgattatgaattctgctaataacaaagaagtg
gatatcttacggatgcttaccaaggccaaagatgagtataccaagtgtaagacctgctca
gagccaaaacaaataaccagttcctctgcaatctataacaaccccaacctgatcaaacca
attccagtgaagcctagtgaaaatcagcagcaacgagcatctcagcaaagcaagaatgtg
gatcctgaaccacagcacttgtctttgacagcactgtttggaaaacaagaaaagacagat
gtctcagaaccgcttaataagcagcatcaagagaatcttcctgttaggcagggtgtggta
cgttcactgtcctatgaagaacctagcaggcattcaccctctgcagagaaacagctttgc
cctgccattcagaagcttatggtgcgtgggacagaccttcatccacttgctgagtttcct
gagaaccgactttgtgaaaatggcaatatccaccctgtgggtgagactttcacaggactc
ttccaacctgtgacttctcatggtattgcagcatctcatgtagttcaggatactgctggc
actcagagcttattgcagaaattacaaagtcagtcagggacagtgactaaaatggacgcc
aatgcaataggatctgtgaactcaacagcttctgtgttcagtaggactcctgctcctgtt
ggagcaccagcaggaacagtaaataatatgagccagccacctttggtatatttcaatggt
tccctaccaggccagactttagaatctcagacagttggtaaagaacaatccaaacttcct
aggcagccactttctctctctggcaatcaagcagccagttctggggtgatttcacctcaa
gagttactgaaaaaactccaaatagtgcaacaagaacaacagttgcatgtatccagcaga
ccaaccttggcagctaagtttcctgtcgttactcagaataccaatacattgaaaccactg
gattcttggatcgaaaaggcaccgggtgcagaaaaacagagcgcgctcttccaggtaatc
tcacctcaacgcattcctgccactgtgactcctactttgttgatgtcccccatggtgttc
actcagtccacatctgctccaccaaaagcaaatgaaagtgggcagttagcagcagcaaac
caagaacctgctgctagctcagctaaccttctcctgccactgcaaaacccagagccttct
gtggtcaacagcagctcaatgacgaagatgcagctgcaggaaacacttctacacctgatc
cagaatgatgacaacttcttaaatattatttatgaagcatatctcttcagcgtgagaaag
gcggcaatgaaaaagtctatgtga
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