Strigops habroptila (Kakapo): 115605749
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Entry
115605749 CDS
T08851
Symbol
CALD1
Name
(RefSeq) caldesmon isoform X1
KO
K12327
caldesmon
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
115605749 (CALD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
shab04812
]
115605749 (CALD1)
Cytoskeleton proteins [BR:
shab04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
115605749 (CALD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
115605749
NCBI-ProteinID:
XP_030336485
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Position
3:complement(64004729..64201380)
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AA seq
773 aa
AA seq
DB search
MDDFERRRELRRQKREEMRLEAERLSYQRNDDDEEEAARERRRRARQERLRQKEEGDLSG
EVTEKSEINAQNSVAEEETKSTTTTRGTDDEAALLERLARREERRQKRLQEALERQKEFD
PTITDGSLSLPSRREVNNVEENETTGKEENAETRRGRYEIEETETVTKSYQRNNWRQDAE
DEGKKEEKDKEEVQEEKPKEAPVEENQVDVTAEKSTDKEEVTETKSLAINAEEHKAENDT
NAVPEGEQSVSDAVDKEKLTDEEKAEEERKKAEEREKLEAEERERLKSEEEKKAAEERAK
AEEEKRAAEERAKAEEEKRAAEERAKAEEEKRAAEERERAKAEEEKRAAEERERAKAEEE
KRAAEERERAKAEEEKRAAEEKAKLEAEKLNEKQKLEEKKIEDKQVKAKKAQEEKPQAAL
IRKQVKGDKDKGKAPKEEIKSVWDRKKGVPEQKAQNGERELTAPKLKSTENAFGRSNLKG
TTNAEEVKLGSQVEAAKRLEDQRRRRGENNELEKLKEKQQEAAAELDELKKRREERRKIL
EEEEQKKKQEEAERKVREEEEKRRMKEEIERRRAEAAEKRQKMPEDGVSEDKKPFKCFSP
KGSSLKIEERAEFLNKSAQKSGMKPTHTTAVVSKIDSRLEQYTSAIEGTKAARPAKPAAS
DLPVPAEGVRNIKSMWEKGNVFSSPSGTGTPNKETAGLKVGVSSRINEWLTKTPESNKSP
APKPSDLKPGDVSGKRNLWEKQSVEKPAPSSKVSAMGKKSETNAGLRQFEKEP
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggatgactttgaacgccgcagagaactcaggaggcaaaagcgtgaggaaatgcgcctt
gaagcagagaggctgtcctaccagagaaatgatgatgatgaggaagaagccgccagggaa
cgtcgccgacgggctcggcaggagagactgcggcaaaaggaagagggagatctatctgga
gaagtaacagagaaatcagaaattaatgcccaaaacagtgtggcagaagaggaaaccaag
agtactacaaccacaaggggaacagatgatgaagctgcattgttggagagactggcaaga
cgggaggagagacgtcaaaaacgccttcaggaagccctggaacgtcaaaaggaatttgac
cccacaatcacagatgggagcttgtctctgcccagcaggagagaagtaaacaatgtggaa
gaaaatgagaccacaggaaaagaggaaaatgctgaaacacgccgaggacgctatgagatt
gaggaaacagaaacagttaccaaatcataccaaaggaacaactggaggcaagatgcggaa
gatgagggaaaaaaagaagaaaaagacaaggaagaggtacaggaggagaaaccaaaggag
gcccctgtagaggaaaatcaggtagacgtgacagcagaaaaatccacagataaagaagaa
gtaacagaaacaaaaagtctagctataaatgcagaggaacacaaagcagagaatgataca
aatgctgtaccagaaggggagcagagtgtaagtgatgctgtagataaagagaagcttacg
gatgaggaaaaggctgaggaagaaaggaagaaagcagaagaaagggagaaacttgaggca
gaagaaagggagaggttaaaatcagaggaggaaaagaaggcagctgaggagagggctaag
gcagaagaggagaagagggcagctgaggagagagctaaggcagaagaggagaagagggca
gctgaggagagagctaaagcagaagaggaaaagagggcagctgaggaaagagagagggct
aaagcagaagaggagaagagagcagctgaggaaagagagagggctaaagcagaagaggag
aagagagcagctgaggaaagagagagggctaaagcagaagaggagaagagggcagctgag
gaaaaggctaagctagaagcagagaaattaaatgaaaaacaaaagttggaagaaaagaaa
atagaagataaacaggtaaaagcgaagaaagcacaagaggaaaaacctcaagcagctttg
ataagaaaacaggtaaaaggtgacaaggataaaggaaaagcacccaaagaagaaattaaa
agtgtctgggatcgtaagaagggagttcctgaacaaaaggcacagaatggagaacgtgaa
ctcactgccccaaaacttaaatctactgagaatgcttttggccgctccaatttgaaaggg
accacaaatgctgaggaggtgaagctggggtctcaggttgaggctgcaaaacggctagaa
gatcagcgccgtcgccgaggtgagaacaacgagcttgagaagctgaaggagaagcagcag
gaggcagcagcagagctggatgaactgaagaaaaggcgggaggagcgccgaaaaatcctg
gaggaagaggagcagaaaaagaagcaggaggaggctgagagaaaagtcagagaggaggag
gaaaagaggaggatgaaggaagaaattgaaaggagaagggctgaagctgctgagaaacgt
caaaaaatgccagaagatggtgtatctgaagacaagaaaccatttaaatgtttcagtcct
aaaggttcatctctcaagatagaggagcgagcagaatttttgaacaaatccgctcagaag
agtggtatgaaacccacccatacaactgcagttgtctcaaaaattgacagtagacttgag
caatacactagcgcaattgagggcacaaaggctgcaagaccagctaagccagcagcctct
gaccttccagttccagctgagggtgtccgtaatatcaagagcatgtgggagaaagggaat
gttttttcatcaccctctggaacaggaacaccaaataaggaaactgctggactgaaggtt
ggtgtctccagtcgtatcaatgagtggttaaccaagacccctgagagcaacaaatcacct
gctccaaaaccttctgatttaaaaccaggagacgtgtccggcaaacgtaatctctgggag
aagcagtcagttgaaaagccagctccttcttctaaggtatcagctatggggaaaaaatca
gagactaatgcaggtttgagacaatttgagaaagaaccatag
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