Strigops habroptila (Kakapo): 115605842
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Entry
115605842 CDS
T08851
Symbol
ZBED4
Name
(RefSeq) zinc finger BED domain-containing protein 4
KO
K24640
zinc finger BED domain-containing protein 4
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shab03000
]
115605842 (ZBED4)
Transcription factors [BR:
shab03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
115605842 (ZBED4)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
zf-C2H2_12
Flu_PB2_4th
Motif
Other DBs
NCBI-GeneID:
115605842
NCBI-ProteinID:
XP_030336741
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All DBs
Position
3:19604275..19630242
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AA seq
1162 aa
AA seq
DB search
MDGNFVLGKINNLKVEQEEDSINCTLERMDIKTEQDDFKHVDSSDEQEDKEKNFITNNPG
KYLSTENEDDYGSLFSQYSSTLYDVAMEAVTQSLLSSRNINSRKKSPAWNHFFISPRDST
KAICMYCMKEFSRGKNEKDLSTSCLMRHVRRAHPTVLIQENGSMPGISSFSSSTLLLAPQ
PADVGDLSSMLSPIKLVKKMASKIPSPDRIIEESVSIVSTEEIPDLSVSEKCSKEEVMVG
SSPQLPNNQYDDTVENVAEKAVVIPKSTSGSRRRSAVWKHFYLSPLDNSKAVCIHCMNEF
SRGKNGKDLGTSCLIRHMWRAHRSIVLQENGGGTSIPPLYTAPPTLLPSLLPSDSDLNSM
SSSPGKLMKESTSVSSSPDRISEEIHTNLSSGDALVEDSMLSSSDDIGEVSFVSSPEKQC
EGLGPLIFEPTAVFQQNKRIMKRLKSEVWHHFSLSPADSLKAVCRYCSCMISRGKKGDVG
TSCLMRHLYRRHPDVIRNQKSFLDVSLANSPYATLASAECSSSKLTDLPTIVTHDNQIIF
PVNSKKTSKLWNHFSICSADSTKVVCMHCGRTISRGKKPTNLGTSCLLRHLQRFHNNVLK
TDVSETVLSSSTDNHMPLSTELLGSSNFDETNDKFCDSHPVAKKITSLVAEMIALDLQPY
SFVDNIGFNRLLEYLQPQYSLPSPSYFSRTAIPDMYDNVKQIIISHLKEAESGVIHFTSG
IWMSNQTREYLTLTAHWVTFESSFRPQCEDFHCSALLNVSQIDCDYNGISIQKQLEYWWE
TWITSIGLQIGITVTDNQSIEKTLNEGDHSSVQCFSHTVNVIVNEAIKSQRMVQNLLSIA
RKICERVHRSAKAKEKLAELQKEYELPQHQLIQDVPSKWNTSFHMLERLIEQKRAIDEMS
IECSFRELISCDQWEVMQSVCHALKPFEAASREMSTHMSTLSQVIPMIHILNRKIEMLFE
ETMGIDTMLKSLKEAMVSRLSSTLHDPRYIFATLLDPRYKTSLFTEEEAEQYKQDLIREL
EIMSSTSDDDKPVSNGCDSGSPSTNSYGEDNLWSLMGDMKKTKDLKERAKLPEEMVLSYL
EEEVLEHNCDPLTYWNFKKSSWPVLSKLAVRFLGCPPSIVPSERLFSTSNESNNFSQSRL
MIEHFEKLIFLKVNLPLIYFQY
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggatggtaattttgtactgggtaaaatcaataacttaaaagtagagcaagaagaagac
agcattaactgtactctagaaagaatggatataaagacagaacaagatgatttcaaacat
gtggacagcagtgatgaacaggaggacaaagagaagaacttcataaccaacaaccctggc
aaatatttatctacagaaaatgaggatgattacggatctcttttttctcagtatagtagt
acgctgtatgatgtagcaatggaagctgtgacacaaagcctcctttctagcagaaacata
aactccagaaaaaaatcacctgcttggaaccatttttttatatctcctagagatagcact
aaagcaatatgtatgtactgtatgaaagaatttagcaggggtaagaatgagaaggacctg
agtacaagttgtctcatgagacatgtgaggagagcccatcccaccgtactaattcaagaa
aatggaagtatgccaggtatctcctccttttcttcatctacgttgttactagcacctcag
cctgcagatgttggagatctgagttctatgttatcccccataaaactggtcaagaaaatg
gcttctaaaataccatctccagatcgaataattgaggaatctgtttctattgtttctact
gaggaaataccagatctttcagtttctgagaagtgcagcaaagaagaagtcatggttggg
tcgtctccacaactacccaacaaccagtatgatgacactgtagagaatgtagcagaaaaa
gctgttgtaattccaaagagcacatcaggttccaggaggagatctgctgtctggaaacac
ttttatttgtcacctctagataattctaaagctgtttgcatccactgcatgaatgagttc
agtagagggaaaaatggaaaagacctgggaacgagttgtttaataagacacatgtggaga
gcccatcgttccattgtcctgcaagagaacgggggtggtaccagcataccacctctctat
actgcacctccaactctgttgccttctttactaccctcagatagtgatctgaattctatg
tcatcttctcctggaaaactaatgaaagaatcaacttctgtttcctcttctccagacaga
atctctgaggagatccatactaatctctcttctggagatgctctagtggaagactcaatg
ctgtcatcttctgatgatataggtgaagtctcctttgtttcctctcctgagaaacagtgt
gagggattaggtccactaatatttgaacctactgctgtatttcagcaaaataaaaggatt
atgaagaggcttaaatcagaagtttggcaccacttttcattatcgcctgcagacagttta
aaagcagtatgtagatactgcagttgtatgataagtcgtggtaagaaaggagatgtgggc
acaagctgcctgatgagacatctatatagacgccatcccgatgtaattagaaaccaaaag
agctttcttgacgtgagcttggcaaattctccttatgccactttggcttctgcagaatgt
tcatcctcaaagttgactgacttgcctacaatagttacacacgataatcaaattatattt
cctgttaatagtaagaagacctcaaaactgtggaatcacttttcaatttgttctgcagat
tcaacaaaagtagtatgcatgcactgtggacgtacaataagtagggggaaaaagccaacg
aatctaggcacgagttgccttctaagacatttgcagcggtttcataacaatgttttgaaa
actgatgtctcggagacagtattgtcctcatcgacggataatcacatgccactgagcaca
gaattgctagggtcttcaaattttgatgaaaccaatgacaagttttgtgactctcaccca
gttgccaaaaaaatcacaagtcttgtagctgaaatgattgcacttgaccttcagccatat
tcttttgtagacaacattggctttaacaggctgcttgaatatttgcaacctcagtattct
ttaccttctccatcttacttttctaggacagcaattccagatatgtatgataatgtaaaa
caaataattatttctcatcttaaagaagctgaaagtggagtgatccattttacatctgga
atatggatgagcaaccaaacacgagaatatctaactctgacagctcactgggtaacattt
gagtcttcatttcgaccacagtgtgaggatttccattgttcagccctattaaatgtgtca
cagatcgattgcgattacaatggaatcagtattcaaaagcagttagagtactggtgggaa
acatggattacttccattggcttgcagattgggattactgttactgataatcagagcata
gagaaaactttaaatgaaggtgatcattcaagtgtacaatgttttagtcacactgttaat
gtcattgtaaatgaggctattaaaagccagagaatggttcagaatttgcttagtattgca
agaaagatctgtgaacgcgtccatcggtcagcaaaagcaaaggagaagttagctgagttg
cagaaagagtatgagttgcctcagcatcagctaatacaagatgtcccatcaaagtggaat
acatcatttcatatgcttgaacgtcttatcgaacagaaaagagcaattgatgaaatgtca
atagagtgcagctttcgggagctgataagttgtgatcagtgggaagtcatgcagtcggtg
tgtcatgctctcaaacctttcgaagctgcaagcagggagatgagtacacacatgtctact
ctaagccaagtgattccaatgattcatatacttaacaggaaaatagaaatgctatttgag
gaaacaatgggcatagatactatgctaaaatccttgaaagaagctatggtgagtagattg
tcctccacgcttcatgatccaaggtacatttttgctacacttctggatccccggtataaa
acatccttattcacagaagaggaggctgaacaatacaaacaagacttaatcagggagctg
gaaataatgagttctacctcagatgatgataaacctgtttccaatggatgcgattcaggt
tcaccatctacaaattcatatggggaagataatctttggtcactcatgggtgacatgaag
aaaacaaaagacctgaaagagagagcaaagttaccagaggaaatggtgctttcttacttg
gaggaggaagtgcttgagcataactgtgatcctctaacttactggaactttaagaagtca
tcttggccagtactgtcaaaattggctgtcaggttcttgggttgtccaccaagcattgtt
ccttcagagagattgttcagtacatccaatgaaagcaacaactttagtcagtcaaggtta
atgattgaacactttgaaaagcttatctttttgaaagtgaatcttcctttaatatacttc
cagtattga
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