Strigops habroptila (Kakapo): 115605944
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Entry
115605944 CDS
T08851
Symbol
KDM1B
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific histone demethylase 1B
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shab03036
]
115605944 (KDM1B)
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
115605944 (KDM1B)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Thi4
SWIRM
DAO
Pyr_redox_2
FAD_binding_3
Pyr_redox
HI0933_like
FAD_binding_2
FAD_oxidored
Lycopene_cycl
Pyr_redox_3
2-Hacid_dh_C
GIDA
NAD_binding_9
AlaDh_PNT_C
KARI_N
ThiF
NAD_binding_7
Shikimate_DH
zf-RING_2
Attractin
Motif
Other DBs
NCBI-GeneID:
115605944
NCBI-ProteinID:
XP_030336961
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All DBs
Position
1:92048562..92077408
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AA seq
820 aa
AA seq
DB search
MSTGRVRXKKKACSSDQSPDNLPLRSSGRQVKKKAAEAADDDDEASEKKYRKCEKAGCTA
TCPVCFASAAERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYEKYTAWKRIWTSN
GKSEPSPKAFMADQQLPYWVQCTKADCGKWRQLTKEIQLTPQIAKTYRCGMKLNNSTKSE
GSDQCSMPEDLRVAEVSDHWWYSMLILPPLLKDSVAAPFLAAYYPDCVGMSPSCTSTNRL
PGESNLVKLEHLKSVPNLTVAGMNKYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSR
DPTMYLALRNLILALWYTNCKEALTPQKCIHHIIVRGLVRIRCVHEMERILYFMTRKGLI
NTGILSVSPDQYLLPKEYHNKSVIIVGAGAAGLAAARQLHNFGIKVIILEAKDRIGGRVW
DDKTFKGXTVGRGAQIVNGCVQQPMALMCEQLGIKMHKLGEKCDLIQEGGRITDPTIDKR
MDFHFNAILDVVSEWRKDKTQHQDVPLGEKIQEIYKAFIXESGIQFSELEEKVLQFHLSN
LEYACGSNLSQVSARSWDHNEFFAQFAGDHTLLTVGYSTVIDNWQKGLEHPAEFPVQTID
YSGEEVQVTTADGTVWTAQKVLVTVPLALLQKNAIQFNPPLSEKKIKAINSLGAGVIEKI
ALQFPYRFWDSKIQGADFFGHVPPNSSQRGLFSVFYDMDPEGKESILMSVVTGDAVTTIK
NLDDKQVLQQCMTVLRELFKEQEVPDPVKFFVTQWSKDPWLQMAYSFVKTGGSGEAYDII
AEDIQGKIFFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactggaagggtacganacaaaaaaaaggcatgttcttcagaccaatctccagac
aaccttcctctgaggagttctggaagacaggtgaagaagaaagcggctgaagcagcagat
gatgatgatgaagcgtcagagaagaaatacagaaagtgtgaaaaagctggatgcactgca
acatgtcctgtttgctttgcaagtgcagctgaaagatgtgctaaaaatgggtatacatct
agatggtatcatctttcctgtggagaacacttctgcaatgaatgttttgaccactattac
cgaagccacaaagatggttatgagaaatatactgcctggaaaaggatttggacaagtaat
ggcaaaagtgagcccagtccaaaagccttcatggctgatcaacagcttccatactgggtg
cagtgcacaaaggcagactgtggtaaatggcgtcagctgacaaaggaaatccagctgaca
ccacaaatagcaaaaacctacagatgtggtatgaaactgaataattccaccaagagtgag
ggttcagaccagtgttccatgcctgaggacttgagagtggctgaagtttcagaccattgg
tggtactccatgctcatactccctcccttgctgaaagacagtgtggcagctccctttcta
gctgcatattatcccgactgcgtgggcatgagtccatcctgtaccagcaccaatcggtta
cctggtgaatccaaccttgtgaagttagagcacttaaagagcgtgcctaatttgactgtt
gcaggcatgaacaagtatttccagcctttttaccagcccaatgaatgtgggaaagcactt
tgtgtgagaccagatgtcatggaactggatgagctctatgagttcccagaatattcacga
gaccccaccatgtacttggctttgagaaacctgattttggctctgtggtatacaaactgt
aaggaggctcttacccctcaaaaatgtatccatcacatcattgttcgggggcttgtgcgt
attcgctgtgtacatgaaatggagaggatactttattttatgacaaggaaagggctaatt
aatacagggattttatcagtcagtcctgaccagtatctccttcctaaagaataccacaat
aaatctgtcattattgttggggctggtgcagcaggattagcagcagcccgacagctgcac
aattttggaattaaggtcattatcctggaagctaaagacagaattggtggccgagtgtgg
gatgacaagacattcaaaggantcactgttggaagaggtgcacaaattgtcaatggatgt
gtccaacaaccaatggcactaatgtgtgagcaacttggcattaaaatgcacaaactaggg
gagaaatgtgacttgatccaggaaggtggaaggataacagatcccaccattgataaacgt
atggactttcatttcaatgccatcctagatgtcgtctctgagtggagaaaagataaaact
cagcatcaagatgttcctcttggtgaaaaaatacaagagatctataaagcctttattnca
gaatctggtatccagttcagtgagcttgaagaaaaagtactacagttccatctcagtaat
ttggagtatgcctgtggcagcaacctctctcaggtatctgcacgctcatgggaccacaat
gaattttttgcacagtttgctggagatcacactcttctaactgtgggatattctactgtg
attgataattggcagaaggggctggaacatccggctgaattcccagtacagactattgac
tattctggtgaggaagtacaggtcactactgcagatggaacagtgtggacagcacaaaag
gtattagtaactgtaccactggcccttcttcagaaaaatgccattcagtttaatcctcca
ctgtcagaaaaaaaaattaaagccattaatagtttgggagcaggagtcattgaaaagatt
gccttgcagtttccttacagattttgggacagtaaaattcaaggagctgatttttttggt
catgttccacccaattccagccagcgtgggctcttcagtgttttctatgacatggatcca
gagggcaaagaaagcattttaatgtcagtggtcactggagatgctgtgacaaccattaag
aatttagatgataaacaagtactgcaacagtgtatgactgtgcttcgagagctgtttaag
gagcaggaggttcctgacccggtgaagttttttgttactcagtggagcaaagacccttgg
ctccagatggcatatagctttgtgaaaacagggggcagcggtgaagcttacgacattata
gctgaagacatacaaggaaaaattttttttgctggtgaggccacaaataggcactttcct
cagaccgtcacgggagcttacttgagcggagttcgagaagcgagcaaaatagcagcattt
taa
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