Strigops habroptila (Kakapo): 115606001
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Entry
115606001 CDS
T08851
Symbol
AMBRA1
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1 isoform X1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04137
Mitophagy - animal
shab04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115606001 (AMBRA1)
04137 Mitophagy - animal
115606001 (AMBRA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115606001 (AMBRA1)
03029 Mitochondrial biogenesis [BR:
shab03029
]
115606001 (AMBRA1)
Membrane trafficking [BR:
shab04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
115606001 (AMBRA1)
Mitochondrial biogenesis [BR:
shab03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
115606001 (AMBRA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
eIF2A
WD40_MABP1-WDR62_2nd
PRIMA1
Motif
Other DBs
NCBI-GeneID:
115606001
NCBI-ProteinID:
XP_030337044
LinkDB
All DBs
Position
4:6001100..6131885
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AA seq
1301 aa
AA seq
DB search
MKVVPEKNAVRILWGRERGTQALGAQRLLQELVEDKTRWMKWEGKKVELPDSPRSTFLLA
FSPDRTLMASTHVNHNIYITEVKTGKCVHSLVGHRRTPWCVTFHPTIPGLIASGCLDGEV
RIWDLHGGSESWFTDSNNAIASLAFHPTAQLLLIATANEIHFWDWSRREPFAVVKTASEM
ERVRLVRFDPLGHYLLTAIVNPSNQQSDEEVEISVDSTELPHYRQRAILPSQPVRRTPLL
HNFLHMLSSRSSGIQVGEQNSVQDSATPSPPPPPPPPPPPPASENTRASVYNRLRERVSY
PTAECCQHLGMLCLCSRCSSARLPSSLFPHQENAPSTSSGATGTSFSSVQTEPYQPPEQA
SVAQEEQGILNRPSAFSTVQSSTAGNTLRNLSLGPTRRSLSGPLAGHQSRYQQSAREMAS
GLGGSDWSRTVLNMSSRSELEAMPPPRTSASSVSLLSVLRQQEGGSQASVYTSATEGRGF
LAPGAEVDSGSGAGPSNPASIRNELQCDLRRFFLEYDRLQELDQGIGGEPSQSQQAQEML
NNNIEPDRPGPSHQQTPHSSENSSNLSRGHLNRCRACHNLLTFNNDTLRWERSTPSYTAG
QVQSTFEGVPPNTSQVQPAERTEGRAPASGRLQLGSSSTPQEERTVGVVFNQETGHWERV
YSQSASSRPGNVSQEALNQEMPEESSEEDSLRRRLLESSLISLSRYDGAGSREHPIYPDP
ARLSPAAYYAQRMIQYLSRRDSIRQRSMRYQQNRLRSSSSSSSTSENSSPSVEGNDLEFE
DFERDNGDRSRHRAPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHERGQPGLATHSSVN
RVLAGAVIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVQNCKIYNDASCD
ISADGQLLAAFIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGRYV
MVGLASRRILLHPSTEHMVAQVFRLQQPHGGETSMRRVFNVLYPMPADQRRHVSINSARW
LPEPGLGLAYGTNKGDLVICRPEALNSGVEYHWDQMNENVFTVHSSSRSTERPGTSRATW
RTDRDMGLMNAIGLQPRNPPTSVTSQGTQTLAPQLQNAETQTEREVQEQESASAGTGEGE
GPDYGASGEDALSRIQRLMTEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRSSQTGA
ESTGAEGTSAQQSTSQQMAAELEGRIISESMQLSEHGLSPRTAPGGSEGQSAGDLDLPEQ
ARSSMDTEGPIEYSDLTNNNHLPDSTNFYSNDSTSGESRNR
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttgtaccggagaagaatgctgtccgcatcctgtggggtagggaacggggcacc
caagccttgggtgctcagcggctcctgcaggagttggtggaggataaaactcgatggatg
aaatgggagggcaagaaagttgagttaccagacagtccacgctccaccttcttgctggcg
tttagtccagacaggaccctaatggcttccacacatgtgaaccacaacatctacatcaca
gaggtgaaaacgggcaaatgtgttcattccttggttggacatcgccgcactccctggtgt
gtcaccttccatcccaccatcccgggtctcattgcttcaggatgcctagatggggaggtt
agaatttgggatttacacggtggaagtgagagctggttcacagatagcaacaatgccatc
gcatcgcttgcttttcatcctacggctcagctcttgctgattgcaactgccaacgagata
catttctgggactggagtcgtcgggagccctttgcagtggtgaaaacagctagtgaaatg
gagcgggtcaggctggtacggtttgatcccttgggacactacttgctcacagcaattgtt
aacccttctaaccagcagagtgatgaggaagtggaaatctccgtggacagcacagagctg
ccgcattaccgccagcgcgctatccttccgtctcagcccgtgaggcgcacacccctcctc
cacaacttcctgcatatgttgtcctcccgctcctctggcatacaggtgggagagcaaaac
agtgttcaagactctgctaccccatcccctccaccgcctccaccaccaccacctccgcct
ccagccagtgagaacacaagggcatctgtctataacaggctccgagagcgtgtcagctat
cccacagcagagtgctgccagcacctggggatgttgtgcctttgcagccgatgctctagt
gcaagacttccttcttctctcttcccacaccaggaaaacgcaccctccacgtcttctggg
gccactggcacttccttctcctctgtgcagacagagccttatcaacccccagagcaggca
tccgtagcgcaggaggagcaggggatacttaacaggccctctgctttcagcacagttcag
agcagcactgctggcaacaccctgcgcaaccttagcctgggccccacgcggaggtccctc
agcgggcccttggcaggccaccagtcccggtaccaacagtctgcaagagagatggcttca
ggcttaggtgggtctgactggtccaggacagtgctgaacatgagctctcggtcagagctg
gaagccatgcctccccctaggaccagtgcctcctccgtgagcttgctgtcagtgctgaga
cagcaggagggaggttcccaggcatcagtctatacctctgcaacagaagggaggggcttt
ctggccccaggggctgaggtggacagtggtagtggtgctggcccgagcaatccggccagc
atccgtaatgagctccagtgtgatttgaggcgattcttcctggaatatgaccggcttcag
gagttagatcaggggattggtggggagcccagccagtcgcaacaggctcaagaaatgctc
aacaacaacattgagcctgatcggccgggtccctcccatcagcagactccacacagcagt
gaaaacagttccaatttgtcccggggtcacctgaaccgctgtcgtgcttgtcataacctg
ctgacctttaacaatgacacgctgcgctgggagagaagcacgcctagctacacagcaggg
caggtccagagcacgtttgagggtgtacctccaaataccagccaggtgcagcctgcagag
agaaccgagggcagagctcctgcctctggcaggctgcagctgggcagctcttccaccccg
caggaggagaggaccgtgggagtggtctttaaccaggagacggggcactgggaaagagtt
tacagccagtcggcttcaagcagacctgggaatgtatcacaggaggccttaaaccaggaa
atgcctgaggaaagctcagaggaggattcactcaggaggaggttgctggagtcttccctc
atttcgttatctcgctatgatggagcagggtcccgggaacatccaatctacccagaccca
gccaggttgtctcctgctgcatattatgctcagaggatgatccagtatctttcccggagg
gacagtattcgacaacgctctatgagataccaacaaaaccgtctccgctcttcctcctcc
tcttcttccacttcagagaactcaagcccatctgtagagggaaatgatctggaatttgaa
gactttgaaagggacaatggagaccgatccaggcaccgagctcctcggaatgcccgcatg
tctgcaccgtcgctggggcgctttgtcccaagacgcttcttgctgccagagtacttgcct
tatgctgggattttccatgaacggggacaacctggcttggccacccattcctctgtcaac
agggttttggcaggtgctgtgattggggatggacagtcagctgtggccagtaacattgcc
aacacaacctaccggctccagtggtgggacttcactaaatttgatctgcctgaaatcagc
aatgcctctgtgaatgtgcttgttcaaaactgcaagatttacaatgacgctagctgcgat
atctctgctgatgggcagctgctggcagccttcattcccagcagccagagaggcttccct
gatgaaggaatactggctgtgtattctctggcaccacacaacttgggcgagatgctctac
acaaagcgttttggccctaatgccatttctgtgagcctgtcgccaatgggtagatacgta
atggtgggactggcttcccgacgcatcctgctgcacccctccactgaacatatggttgct
caagtcttcaggctgcaacagccccacggtggagaaacctctatgaggagagttttcaac
gttctgtacccaatgcctgccgaccagagaagacatgtcagcatcaactctgctcgctgg
ctgcctgagccaggcctgggattggcatatggcaccaacaaaggggacctggtgatttgc
cgaccagaggccttaaactctggagttgagtaccactgggaccagatgaatgagaacgtc
ttcactgtgcattccagcagcaggagcactgagcggcctggaaccagcagagccacatgg
aggacagacagggacatgggcctgatgaatgccataggcctgcaaccccgaaaccccccc
acctctgtgacttcgcagggtacccagaccttggcgcctcagctgcagaatgccgagact
cagacagagagggaggtacaggagcaggaatccgcctctgcggggactggggaaggtgaa
gggccagactatggggccagtggggaggatgccctgagtaggatccaaaggctgatgaca
gaaggtggcatgactgccgtggtccagcgggagcagagcaccaccatggcgtccatgggt
ggctttggcaacaacatcatcgtgagccaccggatccaccgcagctctcagaccggtgca
gagtccaccggagctgagggcacatcagcacagcagtccacctcgcagcagatggcagct
gagctggagggacggatcatttcagagtctatgcagctctcggagcatggcctgagcccg
cggacagcccctggtgggagtgaaggacaaagcgctggtgacctggacctgccagagcag
gcccggtcctccatggatactgagggaccaattgaatacagtgacctaactaataataac
catcttcctgacagtaccaacttctatagtaatgacagcaccagtggggagtcgcggaac
aggtag
DBGET
integrated database retrieval system
