Strigops habroptila (Kakapo): 115606047
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Entry
115606047 CDS
T08851
Symbol
TRPM5
Name
(RefSeq) transient receptor potential cation channel subfamily M member 5
KO
K04980
transient receptor potential cation channel subfamily M member 5
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shab04040
]
115606047 (TRPM5)
Ion channels [BR:
shab04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115606047 (TRPM5)
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Mso1_Sec1_bdg
NPV_P10
Motif
Other DBs
NCBI-GeneID:
115606047
NCBI-ProteinID:
XP_030337183
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Position
4:complement(51375232..51413090)
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AA seq
1170 aa
AA seq
DB search
MEEMETKLCSSDKEEAFKREPPYCTGEIEFTASGKKRGKFIKVPNTIHPGIIFEVMLNKW
KLPAPNLVVSLVGEEENFQAKPWLWDTLKKGLIKAAQSTGAWIFTSALRVGITRHLVQAV
RDHALASTSSKARVIAIGITSLGKIQHREILDNTKNECLVCYQSDDNIQGPLYSLDHNHS
HFILVDHITPDEPDGTTKLRLTLEKHISEQRTGYGGTGSIEIPVLCLLVNGGPDTLERIC
SGLENSAPWLILAGSGGTADILAAFMNDPQLVMPKAVEKQFKEKFPSKSFLWKDILQWTA
TIQNIISHQHLLTLHNFEQDGSEELDTVILKALVKACKSHSQEAQEYLDELKLAVAWNRV
DIAKSEIFNGDVEWKSCDLEEVMMDALVNDKPEFVKLFIDNGANISEFLTYSRLQRLYCS
VSQKCLLYELLLKKHEESKLTLTGLTGQQHKEQRENCPVFTLSEVSRVLKDLLHDAYKDF
YQDLRYGGKKKSDKMNTKPLPLDMNQKTENPWRDLFVWAVLQNRHKMANYFWAMGQEGVA
SALAACKILKEMSHLETETEVERIMKEAKYEQLAVELFSECYHNSEERAFSLLVRKNQYW
NRITCLQLATEADAKSFFAHDGVQAFLTKIWWGDMSTNTQILKLICGFYCPFLIFTNLIA
FSEEEQSKNEPEPFRELDTLDTERTLFFSRGEDRGSGKLEKQNPPENTSWVTFMFTRWRK
FWTAPITVFMGNVIMYFAFLFLFTYVLLLDFKPPPPEGPSATEIILYFWVFTLVLEEIRQ
SFYTDEDTNLIKKCKLYVEDNWNKCDMVAIFLFIIGVTCRMLKSAFQAGRTILAIDFMVF
TLRLIHIFAIHKQLGPKIIIVERMMKDVFFFLFFLSVWLIAYGVTTQALLHPDDRQVEWI
FRRVLYRPYLQIFGQIPLDEIDTSRKYPRNCTFNPLEILHKNSPSCPNSYANWLVILLLV
IFLLVTNVLLLNLLIAMFSYTFQVVQGNTDTFWKIQRYNLIVEYHGRPALAPPFIIINHI
TLVLRRIFNKMEHKKEHLERDLPVGLDQKIITWELVQKENYLASLEQERKESNEERLKAT
SNKVDNLSKYFSGLKEQEKRFKAMEAQIRHCTAVLSSMVEALTKTNLLCNQPVPNYTCVR
SANTEVPLPERSEREERADQSEADITYIDN
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaatggaaaccaagctctgcagcagtgacaaagaggaagcattcaaaagagaa
ccaccttactgcacaggagaaatagagttcacagcttctgggaagaaacgtggaaagttc
attaaggtcccaaataccattcatcctggaattatatttgaagttatgctcaacaaatgg
aaactacctgctcccaatttggtcgtctctttagtaggggaagaagaaaatttccaggcg
aagccttggctatgggacaccttaaaaaaaggacttataaaggcagctcaaagcacaggt
gcctggatttttaccagtgctttacgtgtaggaataacaagacacctagtgcaagcagtc
cgagatcatgcactggccagtacttcatccaaagccagagtgattgccataggaataact
tcacttggaaaaattcagcacagagaaattctggacaacacaaagaatgaatgtcttgta
tgctaccaatcggatgataatatccaaggcccattgtactccctggaccacaaccattcc
catttcattttggtggatcacataacaccagatgagccggatggaacgactaagctacgt
ctcaccttggaaaagcatatttcagaacagcgtactgggtatggtggaacgggtagcatt
gaaattcctgtgctttgcttactggtaaatggaggaccagacacacttgagagaatatgc
agcggtctggaaaattctgctccctggcttatcttagctgggtctggaggtacagctgac
atcttagctgcattcatgaatgacccacagcttgtcatgccgaaagctgttgaaaagcaa
tttaaggagaaattcccttcaaaaagcttcctgtggaaggacattctccaatggacagca
acaattcagaacattatctcccaccaacatcttctaactttgcataactttgagcaagat
ggttcagaagaactagacacagtcattttaaaagctttagtaaaagcctgcaaaagtcac
agtcaggaggctcaggagtacctggatgaactgaagctggcagtggcctggaatagagtg
gacattgctaaaagtgaaatattcaatggtgacgtggagtggaagtcctgtgaccttgaa
gaagtgatgatggatgctctggtcaacgacaaaccagaattcgtaaaattatttattgac
aatggggctaacatatccgaattcctgacatacagccgtctgcagagactctactgttcc
gtttctcagaaatgcctcctctatgaacttctcctgaagaaacatgaagaaagcaagctg
accttgacaggcctcactggccaacagcataaggagcagagggagaactgtccagtcttc
actctcagtgaggtctctagagttctcaaggatcttctccatgatgcatacaaagatttc
tatcaagacctcagatatggaggcaagaagaaatccgataaaatgaatacaaagccatta
cccttggatatgaaccagaagaccgaaaatccttggagggatttgtttgtatgggcagta
cttcaaaaccggcacaagatggcaaactatttctgggctatgggtcaggaaggggtagct
tcagctctggcagcctgcaagatccttaaagagatgtcccacctggagacagagaccgaa
gtagaacgtataatgaaagaggccaagtatgagcaactcgctgtagaactgtttagtgaa
tgctaccacaacagtgaggagagagcattttctctgttggtgagaaaaaatcagtactgg
aacagaatcacctgccttcagctggccacagaagcagatgcaaagtctttctttgcacat
gatggtgtccaggccttcctgacaaaaatatggtggggagacatgtctacaaacacacaa
atcctgaagttaatctgtggattctattgtcctttcctaatcttcacaaatttaatagca
ttcagtgaggaagaacaatccaagaatgagccagagccatttagagagctggacacttta
gatacagagaggaccctgtttttttccaggggagaagatagaggaagtggtaaattggag
aagcagaaccctcctgaaaacacatcatgggtgacattcatgtttactcgatggagaaaa
ttctggactgcccctataactgtatttatggggaatgttataatgtactttgcttttctg
tttctgtttacttatgtccttttactggactttaaaccacctccacccgagggtccatct
gctacagaaattatactttacttctgggtttttaccctggtcttggaagaaatccgacag
agtttctatacagatgaagacacaaatttaattaaaaaatgtaaactgtatgtggaggat
aactggaataaatgtgatatggtggccatcttcctcttcataattggggtaacctgcagg
atgctgaaatcagcttttcaagctggacgtacaatacttgccattgattttatggtgttt
acacttagactgatacatatttttgcaattcacaaacaacttggaccaaaaatcataatt
gtggaaaggatgatgaaggatgttttcttctttctgtttttcttgagtgtgtggctcatt
gcctacggtgtgacgactcaagctctactccatcctgatgacagacaagtggaatggata
ttcagaagggtgctttatcgtccctaccttcagatatttggccagattccactggatgaa
atagacacatcacgaaagtatcccaggaactgtacatttaatccacttgagattctgcac
aagaactcgccatcatgtcctaatagctatgccaactggcttgtcatacttctgttggtc
atcttcctactcgtcacaaacgttctccttctgaatctcctgattgctatgttcagttac
acttttcaagttgttcagggcaatacagacaccttctggaaaattcagcgctacaacctg
attgttgaatatcatggccggcctgccttagcaccaccatttatcattattaaccacata
actctggttctcagaagaatcttcaacaaaatggaacataaaaaggaacatctggaaaga
gatcttccagttggcctagatcaaaaaatcataacatgggagctggtgcaaaaagaaaat
tatcttgcaagcctcgaacaagaaaggaaagaaagcaatgaagaaaggctgaaggccaca
tctaataaggtggataatttgtcgaaatattttagcggattgaaagaacaagaaaagcgg
tttaaagctatggaagcacagattcgccactgtacagctgttctctcttcaatggtagag
gctttaaccaaaaccaacctcttgtgcaaccaaccagttccaaactatacatgtgtgagg
agtgccaacacagaagtgcctttgccagaaagaagtgaaagagaagagcgtgcagatcag
tccgaggctgacatcacatacattgataattag
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