Strigops habroptila (Kakapo): 115606062
Help
Entry
115606062 CDS
T08851
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03013
Nucleocytoplasmic transport
shab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115606062 (PNN)
03015 mRNA surveillance pathway
115606062 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115606062 (PNN)
03041 Spliceosome [BR:
shab03041
]
115606062 (PNN)
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115606062 (PNN)
Spliceosome [BR:
shab03041
]
Complex C
Other components
EJC/TREX
115606062 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
115606062
NCBI-ProteinID:
XP_030337214
UniProt:
A0A672TP20
LinkDB
All DBs
Position
4:complement(36738590..36749746)
Genome browser
AA seq
693 aa
AA seq
DB search
MAVAVRALQEQLEKAKESLRHVDENIRKLTGRDPNDVRPPQNRLLAITGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGATSRLGGERRTRRESRQESDAEDDDIKKPALPSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLMEESQKKMNALFESRRNEFAEQINKMEARPRRQSVKEKEQQEVQN
EEKKEEQNKEQEEGKAPQQVEELETGNQHNDVEMEEVGEEKGKIGSGHSDAEKEQEEDEQ
KHEMEIKVEEASEVRENDKQQDGQHEEVTVVKEESENVQPVDNEQDVAEMNDAGGIEPVE
NENGKEVEPETECDAQPEKGCNIPSPRKEKGTKPEIEAELEEKQEKAPEAQPEPVAEPLS
QPQSVALSQSPQLSQSTQDTEPQADKDENAVVSVKVVEAQTEQNQTPSVEMKSKTRSRSR
GRAGNKTGKTHSHSSSSSSSSSTSSSTSSGSSSSTGSTSSRSSSTSSSTTSGSTSRDSSS
SSSSSSGSRSRSRGRGHNRDRKRRRSTDRKRRDASGVDRSHKSSKGGSRDTKSSKDKSSR
SDRKRSISESSRSGKRTSRSERDRKSDRKDKRR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgcgcgcgctgcaggagcagctggagaaggccaaggagagcctcagg
cacgtcgatgagaacatccgcaagctcacgggcagggaccccaatgacgtgaggccccct
caaaacagactgttagccatcacaggccctggtggaggtagggggcgtgggagcttattg
ctaaggcgtggattctcggatagtggaggaggacccccagccaaacagagggatcttgaa
ggggcaaccagtaggctgggtggagaacgtcggacaagaagagaatcacgccaagaaagc
gacgcagaggatgacgatattaaaaagccagcgttgccatcttctgttgttgctacctcc
aaagagcgaacacgtcgagaccttatacaagatcaaaatatggatgagaaaggaaaacaa
aggaatcgacgtatatttggcttgttgatgggcactcttcaaaaatttaaacaggagtcc
acagttgctactgaaaggcaaaagagacgccaagaaattgaacaaaaacttgaagtgcag
gcagaggaagaaagaaagcaagttgaaaatgaaaggcgagaactgtttgaagaaagacgt
gctaaacagacagagctgcggttactggagcaaaaagttgagcttgcccagttgcaagaa
gaatggaatgaacataatgctaaaataattaaatacataagaacaaagacaaaaccccac
ttattctacataccaggcagaatgtgtcctgctacgcagaagttgatggaagagtcacag
aaaaagatgaatgcactctttgaaagcaggcgaaatgaatttgcggagcagattaacaaa
atggaagccaggcccagaagacaatctgtgaaggaaaaagaacagcaggaggtgcagaat
gaagaaaagaaggaagaacagaacaaggagcaggaggagggtaaggcgcctcagcaggtg
gaagagttggagacaggtaatcagcacaatgatgtagaaatggaggaggtaggggaggag
aagggaaaaataggttcagggcatagtgatgcagagaaagaacaggaagaggatgaacag
aaacatgaaatggagattaaagtagaagaggcttctgaggtgagggagaatgacaagcaa
caggatggtcagcatgaagaggtcacagttgtaaaagaggaaagtgaaaacgttcagcca
gtggataatgagcaggatgtggctgaaatgaatgatgcaggtggtatagaacctgtagaa
aatgaaaatggcaaggaagtggaaccagaaacagagtgtgatgctcagccagaaaaaggg
tgtaacattccttctcccaggaaggagaagggtaccaaaccagaaattgaagctgaactt
gaagaaaaacaggagaaggcacctgaagctcagccagaacctgtggctgagcctctatct
cagccacagtctgtggcgctgtcacagtcacctcagttgtctcagtccactcaggataca
gagccccaggcagacaaggatgaaaatgctgtggtgtctgtaaaggtggttgaggcacag
acagagcagaatcagacacccagtgtagaaatgaagagtaagactaggagtagaagcagg
ggtagggcagggaacaaaactggtaagactcatagccatagtagcagcagcagtagcagc
agtagtacttcaagcagtactagtagtggaagtagttccagtacgggcagcactagcagt
cggagtagttccaccagcagcagcactacaagtggaagtactagcagggacagtagcagc
agtagctctagcagtagtggaagtagaagtcgaagccgaggaagagggcataacagagat
agaaagcgcagaaggagcacggacaggaagcgaagggatgcttcaggagtagatagaagt
cacaagtcttcaaaaggtgggagtagagataccaaaagctcaaaggataaaagttcaaga
tctgacagaaagagatctatatcagaaagtagtcggtcaggaaagagaacttcacggagt
gaaagagaccgtaaatcagacaggaaagacaaaaggcgttaa
DBGET
integrated database retrieval system
