Strigops habroptila (Kakapo): 115606088
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Entry
115606088 CDS
T08851
Symbol
ABCA3
Name
(RefSeq) ATP-binding cassette sub-family A member 3 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115606088 (ABCA3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shab02000
]
115606088 (ABCA3)
Transporters [BR:
shab02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
115606088 (ABCA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
RsgA_GTPase
AAA_22
DUF4162
AAA_30
AAA_15
Motif
Other DBs
NCBI-GeneID:
115606088
NCBI-ProteinID:
XP_030337276
LinkDB
All DBs
Position
4:69072086..69103836
Genome browser
AA seq
1719 aa
AA seq
DB search
MVVLRQFGLLLWKNYILQKRQILVTLIEICLPLLFAAILIALRHRVHSISHPNATIYPPE
SVDDLPSFFYSRHPSNPWELAYVPSNSSAVRSIAEVVERALPISIRAQGFASERDFEEYV
KLDNRSGSVLAAVVFKHHFQQSTSPLPLQVDYELRFKYSPRNAPRSEQTGLNPNLDRDWH
TSYLFPLFQLPGPREAKFADGGTPGYIREGFLAVQHAVDRAIMQHHANASSTSLLENITV
VVQRFPYPAYVNDLFLLAIQNQLPLLLMLSFTYTSLNIVRAVVHEKEKKLKEYMHMMGLS
NWLHWSAWFLMFFLFLLVSVFFVTVLFCVKVSEQGAVLSNSDPTLVFTFLAIFSVSSISF
NFMVSTFFSRANVAAAAGGFLYFFSYIPYFFISPRYDLMSHSQKMASCLISNVAMAMGAQ
LIGMFEGKGTGIQWRDLMKPISVDDNFTLAQVLGMLLLDSVLYGLVAWYVEAVFPGEYGV
PQPWYFFLTPSYWCGRPRTVVGKEKEEEEDPEKALKSQYIEEEPADLMSGIKIKHLSKVF
KVGNKMKEAVKDLTVNMYEGQITVLLGHNGAGKTTTLSMLTGLHSPTGGQAYINGYEISQ
DMVLIRHSLGLCPQHDVLFDNMTVEEHLHFYAGLKGYPPSKCPEEINHILRILNLEDKRR
SLTKALSGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPASRRATWDLLQQQRSNRTILLT
THFMDEADLLGDRIAIMAKGELQCCGSSLFLKRKYGAGYHMVMVKERYCNLGEISRLICQ
YVPNATMESNAGAELSFILPKESTHRFEALFTELEQRREELGIASYGASVTTMEEVFLRV
GKLVDSSMDIQAIQLPALQYQHERRSNDWAMDDSSSLSGMTDMTDDSGALITEDCSSIKL
NTGFYLCCQQFYAMFMKRAMYSWRNWKMVAAQFLVPLIFTAFALVVAKTFPGPRDSSLLR
LTLEPYGQTIVPFSIPAAAALPQRLAEQYMELLDAQRQSPLEVLGEEGSGSTCGAGGLEE
YLISRASEEGGAFNEHYIAAASFEGAGNRTVVTALFNNQAYHSPATALMLADNAVFRVLA
GCNASITVTNYPQPRNITEKAKDQLMEGQTGFAIAINLLYGMASLASTFALLLVSERAIK
AKHVQFVSGVYVVNFWLSALLWDIINFLIPCALMLVVFQAFGVQAFTQDSHLVDVMLIFL
LYGWAIIPLMYLLSFFFSVAATAYTRLTIFNILSGTATFLAVTIMSIPELGLVDLSKTLD
KVFLVLPNYCLGQCISDFYQNYEFIQFCTSSVEAIFICKAFNISYEMNYFSWETPGIGRY
LTSLTIQGFSFLFLLFLIETNLLWRLKTLVCGICRRRKWVALLNRVSVLPEDRDVADERK
KVLESPPELLSSLSSPLVIKELTKVYDSRESLLAVDRISLAVSKGECFGLLGFNGAGKTT
TFKMLTGDESITSGDAFVDGHSILANIKKVQQRIGYCPQFDALLEHMTGRETLSMYARLR
GIPERYIGSCVENMLRGLLLEPHADKLVRTYSGGNKRKLSTGIALIGGPPVIFLDEPSTG
MDPVARRLLWDAVTRTRECGKSIIFTSHSMEECEALCTRLAIMVNGQFKCLGSPQHLKSK
FGSGYTLLAKIRSEEEGELLAFKAFVEKTFPGSILKHEHQGMVHYHLTNKNLSWAQVFGA
LEKAKEKYRLEDYSVSQISLEQVFMSFTHFQHYTEDRGK
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atggttgttctcaggcagtttgggctgctgctctggaagaactacatcctgcagaagcgg
cagatcttggtgacactcattgaaatctgcctgccgctgctcttcgctgccatcctgata
gcgctgcggcaccgggtgcactccatcagccaccctaacgccaccatctacccccccgag
tctgtggatgacctgcctagcttcttctactcccggcaccccagcaacccctgggagctg
gcctatgtcccctccaacagcagtgctgtcaggagcattgccgaggtggtggagagagct
ctgcccatcagcatcagagctcagggctttgcctcggagagggactttgaggagtacgtc
aagttggacaaccgttcgggcagcgtgttggctgccgttgtgttcaagcaccacttccaa
cagagcacatccccactgcccctccaggtcgactatgagctacgcttcaagtacagcccg
aggaatgcaccacggagtgagcagacgggtctgaaccccaacctggaccgggactggcac
accagctacctcttcccactcttccagctgcctggaccccgggaggccaagtttgctgat
ggcgggacaccgggttacatccgggaaggtttcctggcggtgcagcacgctgtggacaga
gccatcatgcagcaccacgccaatgccagctccaccagcctgctggagaacatcacggtg
gtggtgcagcgcttcccctacccggcgtatgtcaacgaccttttcctcctggccatccag
aaccagctgcctctcctgctcatgctcagcttcacctacacctcgctcaacatcgtccgt
gccgtcgtccatgagaaggagaagaagctgaaggagtacatgcacatgatgggcctcagc
aactggttgcactggagcgcctggttcctcatgttcttcctcttcctcctggtgtccgtg
ttttttgtcactgtcctcttctgtgtcaaggtgagtgagcagggagcagtgctctccaac
agtgaccccacgctggtgttcaccttcctcgccatcttctccgtctcctctatctccttc
aacttcatggtgagcaccttcttctcaagagcaaatgttgcggctgccgctggcggcttc
ctctacttcttctcctacatcccttacttcttcatctcgccccgctacgacctgatgtcc
cacagccagaagatggcatcctgcctcatctccaatgtggccatggccatgggggcacag
cttataggcatgtttgaaggaaaaggaactggcattcagtggagggacctcatgaagccc
atcagcgtggacgacaacttcaccttagcccaagtgctgggaatgctgctcctggactcg
gtactttatggcctggtggcctggtatgtggaggctgtcttcccaggggagtatggtgtg
ccccagccatggtacttcttcctgacgccctcatactggtgtgggcgccccaggactgtg
gtgggaaaagagaaggaggaggaagaggaccccgagaaagctctgaagagccagtacatt
gaggaggaacctgctgacctcatgtcaggaatcaaaataaagcacctttccaaggtcttc
aaagtgggaaacaagatgaaagaggcagtcaaggacttaacggtgaacatgtatgaaggg
cagatcaccgtcctgctgggacacaatggtgctgggaagaccaccactttgtccatgctc
acagggctgcactctccgacaggcgggcaggcgtacatcaacggctacgagatctcccag
gacatggtcctgatccgccacagcctgggcctgtgtccccagcacgatgtcctctttgac
aacatgacggtggaagagcacctccacttctacgcagggctgaaggggtacccaccctcc
aagtgccccgaggagatcaaccacatcctgaggatcctcaacctggaggacaagcgccgc
tccctgaccaaggcgctctctggcgggatgaagcgcaagctctccattggcatcgccctc
attggggactccaaggtggtgatgctggatgagcctacatcaggaatggacccagcctct
cgcagggccacatgggaccttctgcagcagcagaggagcaaccgcaccatcctgctgacc
acccacttcatggatgaggctgacctgctgggtgaccgcattgctatcatggccaagggc
gagctgcagtgctgcggctcctcactcttcctcaagcgtaaatacggggcaggatatcac
atggtgatggtgaaggagcgctactgtaacttgggggagatctcccgcctcatctgtcag
tatgtgcccaacgccaccatggagagcaatgctggggcagagttgtccttcatcctgccc
aaggagagcacgcacaggtttgaggccctgttcacggagctggagcagaggcgggaggag
ctgggcatcgccagctacggcgcctccgtcaccaccatggaggaagtcttcctgagggtt
gggaagcttgtggactccagcatggatatccaggccatccagctgcctgctctccagtac
cagcatgagaggcgctccaacgactgggccatggatgactccagcagcctgagtggcatg
acagacatgacggatgacagtggggcactcattactgaggactgctccagcatcaagctc
aataccgggttctacctgtgctgtcagcagttctacgccatgttcatgaagcgagccatg
tacagctggcgcaactggaagatggtggcagcgcagttcctcgtgcctctcatcttcact
gcctttgccctcgtggtggccaagaccttcccagggcccagggactcgtccctgctccgg
ctgacgctggagccgtatggccagaccatcgtgcctttcagcatcccagccgctgcggct
ctgccccagaggttggccgagcagtacatggagctgctggatgcccagcgccagtcaccg
ctggaggtgctgggtgaggagggttcagggagcacctgtggagcaggtggcctggaggag
tacctcatctcaagagcctctgaggaagggggagccttcaatgagcattacatcgcagcc
gcctccttcgaaggagctgggaaccgcacggtggtcaccgcgctcttcaacaaccaggca
tatcactcccctgccacggccctgatgctggctgacaacgctgtcttcagggtgctggcg
ggctgcaatgcctccatcacagtcaccaactaccctcagccccgcaacatcactgagaag
gccaaagaccagctcatggaaggccagaccgggtttgccatcgccatcaacctgctgtac
ggcatggcctcgctcgccagcacctttgccctgctgctggtcagcgagcgcgccatcaag
gccaagcacgtccagtttgtcagtggcgtctacgtggtcaacttctggctttctgccctg
ctctgggacatcatcaacttcctcatcccttgtgctctgatgctggtggtattccaagcc
tttggcgtgcaagccttcacccaggacagccacctcgttgatgtgatgttgatcttcctc
ctttatggctgggccatcatccccctcatgtacctcctcagcttcttcttctcggtggca
gccacagcctacacccgcctcaccatcttcaacatcctctcgggcacagccaccttcctc
gcagtcaccatcatgagcatcccagagctgggcctggtggacctttccaaaaccctggat
aaagtctttcttgtcttacccaattactgcttgggccaatgcatcagtgacttctaccag
aactatgagttcattcagttttgtacatcctctgttgaagctatcttcatctgcaaggca
ttcaatatcagttatgagatgaactacttttcctgggagacgcctgggattggacgatac
ctgacctccttgaccatccagggtttctccttcctcttcctccttttcctcattgagaca
aacctcctctggagactgaaaactttggtctgtggcatctgcaggcggcgaaaatgggtg
gcactgctgaacagggtgtctgtgctgccagaggaccgggacgtggcagatgagaggaag
aaggttttggagtcgccaccagaacttctgtcatctctcagcagccctctggtcatcaag
gagctcaccaaggtctacgacagccgggagtccctgctggcggtggacaggatctccttg
gcggtcagcaaaggggaatgctttggccttctgggcttcaacggagcgggcaaaaccacc
accttcaagatgctgactggtgacgagagcatcacatcgggggatgcctttgtggatggc
cacagcatcctggccaacatcaaaaaggtgcagcagcggatcggctactgcccgcagttc
gatgcactcctggagcacatgacgggccgcgagacgctgagcatgtatgcgcggctgcgg
ggcatccccgagcgctacatcggcagctgcgtggagaacatgctgagggggctgctgctg
gagccccacgccgacaagctcgtgaggacctacagcggtggtaacaagcggaagctgagc
actggcattgccctcatcggtggtcccccggtgatcttcctggatgagccctccacaggc
atggaccctgtggcacggcgtttgctctgggatgcagtgacacggacacgggagtgtggc
aaatccatcatcttcacctcccacagcatggaggagtgcgaggccctgtgcacgcggttg
gccatcatggtgaatgggcagttcaagtgcctgggcagcccccagcacctgaaaagcaag
tttggcagtggctacaccttgctggccaaaatacggagcgaggaggagggcgagctgctg
gccttcaaggccttcgtagagaagactttcccaggcagcatcctgaaacatgaacaccag
ggcatggtacattatcacttgaccaacaagaacctcagctgggcacaggtcttcggggcc
ttggagaaagccaaagagaagtatcgcttggaagactattccgtgagccagatatccctg
gagcaagtcttcatgagcttcactcatttccagcactacacagaggacagagggaaatga
DBGET
integrated database retrieval system
