Strigops habroptila (Kakapo): 115606108
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Entry
115606108 CDS
T08851
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03420
Nucleotide excision repair
shab03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
115606108 (ERCC4)
03460 Fanconi anemia pathway
115606108 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shab03032
]
115606108 (ERCC4)
03400 DNA repair and recombination proteins [BR:
shab03400
]
115606108 (ERCC4)
DNA replication proteins [BR:
shab03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
115606108 (ERCC4)
DNA repair and recombination proteins [BR:
shab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
115606108 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
DUF4110
Motif
Other DBs
NCBI-GeneID:
115606108
NCBI-ProteinID:
XP_030337325
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All DBs
Position
4:70844073..70859163
Genome browser
AA seq
903 aa
AA seq
DB search
MAALLEHESQVFLDLFHQDGLVICARGLGIDRLLLRFLRLYCEPASLVLVLNTGPAEEEY
FIDQLRSDGVVHLPRRVTNEVTNNTRYEFYTQGGVIFATSRILVVDFLTDRIPANLITGI
LVYKAHRIIESCQEAFILRLYRQKNKNGFIKAFTDNAVAFNTGFCHVERVMRNLFVKKLY
LWPRFHIAVNSFLEKHKPEVVEIHVSMTPAMLAIQTSILDILNACLRELKRYNPVLEVED
LSLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLLYLTHYDCVTFLNLLE
SLKASEKAFGENSGWLFLDSSTSMFVNARARVYRIADEKLHQKSKGSEKSGVKKENELKR
ELVLESNPKWEALREVLKEIENENKNSEDFGGPGQVLICASDDRACAQLREYIIAGAEAL
LTRLYNKTFGKDEKAEEVWIKDRKAVKSKGNARPDRGPQAKKAKLAASSKQSKPKKQQDR
TIIQMIGKTEEEKREEVEVEDNKELSSNQESGIEETIPEDFNVNLPSDCYYGIFKNPLTI
IHPLQGCGDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYKASRPGKPLRVYFLIYGGS
TEEQRYLTALRKEKEAFEKLIREKASMVIPEEREGRDETNFDLIRDANPASAVPDTRKAG
GQEQKSVQQTIIVDMREFRSELPALIHRRGIDIEPVTLEVGDYILTPDTCVERKSISDLI
GSLNNGRLYAQCVSMSRYYKRPVLLIEFDPNKPFSLIPRGSLCQEISSNDITSKLTLLTL
HFPKLRILWCPSPHVTAELFEELKQNHPQPDAETAMAVTADSEILPESDKYNPGPQDFLL
KMPGINAKNCRALMNHVKSIAELVTLSKDELHKILGNAANATQLFDFIHLTYGEAVSKEK
SKR
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgctggagcacgagagccaggttttcctggacctgttccaccaggacggg
ctggtgatctgcgcccgcgggctcggcatcgaccgcctgctgctgcgcttcctacgcctc
tactgcgagcctgccagcctcgtgctggtgctcaacaccggccccgccgaggaggagtat
tttatcgatcagctgaggtcagatggagttgttcatcttcctcggcgtgttaccaatgaa
gttacaaataatactcggtatgaattttacactcaaggaggagtcatatttgctacaagt
cgaatccttgtggtagatttccttactgacagaattcctgcaaaccttattactggcatt
ttggtatacaaagcacacagaatcattgagtcctgtcaggaagcctttatcttgcgtctt
tatcgccagaagaacaaaaatggcttcattaaagcttttacagataatgcagttgcattt
aacaccggcttttgccacgtggaaagagtgatgagaaatctttttgtcaagaaactttat
ctgtggccaagatttcatatagcagtgaactcatttttagagaagcataaacctgaagtg
gtggaaatacatgtgtcaatgacccctgctatgcttgctatccagacttcaatccttgac
attctgaacgcatgtctgcgagaactcaaacgttacaatccagttcttgaagtagaagat
ttgtctttagaaaatgctattggtaaaccttttgacaagacaatacgtcactatttagat
cctctctggcaccaacttggagctaagacaaaatctttggtccaggatttgaagatacta
cgtactttgctactgtatctaactcactatgattgtgtcactttccttaatcttctggag
tcactgaaagcaagtgaaaaagcttttggtgagaattcaggttggctgtttcttgactcc
agcacttcaatgtttgtaaatgctcgagctagagtttatcgcattgcagatgagaaactg
catcagaaaagcaaaggctctgaaaaaagtggtgtgaagaaggaaaatgaactgaaaagg
gaattggttctagaaagtaacccaaaatgggaagctttgagagaagtgctgaaagagatt
gaaaatgagaataagaacagtgaagactttggtggtccagggcaagtgcttatttgtgcc
agtgatgaccgagcttgtgcacagctcagggagtatattattgctggagcagaagctttg
ttaacaagactgtataacaaaaccttcggaaaggatgagaaagctgaagaagtgtggatt
aaagacagaaaagctgtcaagtccaaaggaaatgccagaccagacagagggcctcaagcc
aaaaaagccaaactcgcagcttcgtcaaaacaaagcaaacccaagaagcagcaagaccgg
actataatccaaatgatagggaaaactgaggaggaaaagagagaggaggtagaggtggaa
gataacaaagaattaagcagtaaccaagaaagtggtattgaagagaccattcctgaagat
ttcaatgtgaacttaccctcagattgttactacggcattttcaagaacccgctcacaatc
attcatccactgcagggctgcggtgatccctacgcactcactcgggtcctgcatgaagta
gaaccaagatacgttgtgttatatgatgcagagctgacttttgttcggcagctggaaatc
tacaaggccagcaggcctggaaagcctttgagagtttatttcctcatatatgggggctca
acagaagaacagcgctacctcacagctctgagaaaagagaaggaggccttcgaaaagctc
attcgagagaaggccagcatggttattcctgaagaaagagaaggaagagatgaaacaaac
tttgacctaataagagatgctaatcctgcttctgctgttcctgacacacgcaaagcaggt
ggccaggaacagaagagtgttcagcaaactataatagtggatatgcgggaatttcgtagt
gagcttccagcgctgattcatcgtcgtggtattgacattgagcctgttactttggaagtt
ggggattatattttaactcctgatacctgtgtggagcggaaaagtatcagcgacctgatt
ggctccttgaataacggcaggctgtatgcacagtgcgtttccatgtcccgttactacaag
cgaccggttctcctgattgaatttgatcctaataaacctttctctttgattccacgtggc
tctctatgtcaggagatttccagtaatgatattacttctaagctaacccttctcacactc
catttcccaaagttacgtatcctgtggtgtccctctccccatgttactgctgagctgttt
gaagagttaaaacagaaccatcctcagcctgatgcagaaacagcgatggctgtcacagca
gattctgaaattcttcctgagtcagacaagtacaaccctggtcctcaggacttcctgtta
aaaatgccaggtattaatgcaaaaaactgccgtgccttaatgaaccacgttaaaagcatt
gcagagctggtgacactgtcaaaggacgaactccacaaaatcttgggtaatgctgccaat
gccacacaactctttgactttattcacctgacctacggagaggcagtatctaaagaaaaa
agcaaaaggtga
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