Strigops habroptila (Kakapo): 115606174
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Entry
115606174 CDS
T08851
Symbol
SCFD1
Name
(RefSeq) sec1 family domain-containing protein 1 isoform X1
KO
K19998
sec1 family domain-containing protein 1
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115606174 (SCFD1)
Membrane trafficking [BR:
shab04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
115606174 (SCFD1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
115606174 (SCFD1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
cwf21
Motif
Other DBs
NCBI-GeneID:
115606174
NCBI-ProteinID:
XP_030337478
UniProt:
A0A672TG77
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Position
4:complement(40527407..40579468)
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AA seq
632 aa
AA seq
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MAAGIREKQTVALKRMLNFNVPPVKNSTGEPVWKVLIYDRFGQDIISPLLSVKELRDMGI
TLHLLLHSDRDAIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKLEDI
ANAAIGANAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITDTEMETIM
DTIVDSLFCFFVTLGAIPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTGDTLGAGQ
FSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESTGTESSPAGARPK
KKNKKSYDLTMSDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMGIEGEDEG
AISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKSRKLDVYFEYEEKIMS
KSTLDKSLLDMISDPDAGTPEDKMRLFLIYYISSAQAPSEIDLEQYKKALTDAGCNLAPL
SYIKQWKAFTKMASAPTSYGNTTPKPLGLLSRVMNTGSQFVMEGVKNLVLKQQNLPVTRI
LDNLMEMKSNPETDDYRYFDPKMLRGSDSSVPRNKNPFQEAIVFVVGGGNYIEYQNLIDY
IKGKQGKHILYGCSELFNAIQFIKQLSQLGQK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggcatccgcgagaagcagacagtggctttgaaacgtatgctgaacttcaat
gttcctcctgttaaaaacagcacaggagaaccagtatggaaggttctcatttatgacaga
tttggccaagatataatctcacctttgctgtcagtgaaagagctgagagatatggggatc
actttgcatctgcttttgcattcagatcgggatgctattccagatgttccagctgtttac
tttgtaatgccaacagaagaaaatattgacagaatgtgccaggatcttcgaaaccagctt
tatgaatcttattatctaaactttatttctgccatttcaagaagtaaactggaagatatt
gcaaatgctgccataggcgctaatgcagtaactcaggtggctaaggtgtttgatcagtat
cttaattttattactttagaagatgacatgtttgtattgtgtaaccaaaacaaagaactt
gtttcctatcgtgccattaaccgaccagatataacggacacagaaatggaaactataatg
gacactattgttgatagtctcttctgtttttttgttacacttggagctattcctataatc
agatgctcaagaggaactgcagctgaaatggtggcagtgaaattagataagaagctcaga
gaaaatctaagagatgccagaaacagcctttttacaggtgacacacttggagctggccag
ttcagcttccaaaggcccctattagtccttgttgacagaaacatagatttagcaactcct
ctacatcatacatggacataccaagctttagtgcatgatgttctggatttccatttgaat
agagttaacttggaagaatcaacaggaacagaaagttctccagcaggtgctagacctaag
aaaaaaaataagaagtcctatgatttaactatgtctgataaattctggcaaaagcataag
ggcagtccttttccagaggtagctgagtcagttcagcaagaactggaatcctacagagcc
caagaagatgaagtcaaaagacttaaaagtatcatgggtatagaaggggaggatgaagga
gcaataagtatgctttctgataatacagctaagctaacttcagctgtcagctctcttcca
gaacttctggaaaagaagaggctcattgatcttcatacaaatgttgcaacagctgttttg
gagcatataaagagtcgaaagctggatgtgtattttgagtatgaggagaagataatgagc
aaatccactctggataaatctcttctggacatgatttctgacccagatgcgggaactcca
gaagacaaaatgcgattgtttttgatctattacataagctcagctcaggcaccttcagag
attgatttggagcagtataaaaaagcattgacggatgcaggttgtaatcttgctcctttg
agctacataaaacaatggaaggctttcactaagatggcttcagctccaactagctatgga
aacactacgcctaaacctttgggtctgctttcacgtgttatgaatacaggatcacagttt
gtaatggaaggagtgaagaacttggtactgaagcaacaaaatctgccagtcacacgtata
ctggacaaccttatggagatgaagtcaaaccctgagacagatgactaccggtattttgac
cccaagatgctacgaggcagtgacagctcagttccaagaaacaaaaatccattccaggag
gcgatagtgtttgtagtcggaggaggcaactatattgaataccaaaatcttattgactac
ataaagggtaaacaaggcaaacacatcctgtacggctgcagtgaactttttaatgctata
cagtttataaaacagctgtcccaacttggccagaaataa
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