Strigops habroptila (Kakapo): 115606271
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Entry
115606271 CDS
T08851
Symbol
DCAF13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shab03009
]
115606271 (DCAF13)
04121 Ubiquitin system [BR:
shab04121
]
115606271 (DCAF13)
Ribosome biogenesis [BR:
shab03009
]
Eukaryotic type
90S particles
Other 90S particles
115606271 (DCAF13)
Ubiquitin system [BR:
shab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
115606271 (DCAF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_RFWD3
eIF2A
Beta-prop_IFT122_1st
MIOS_WD40
ANAPC4_WD40
Beta-prop_IFT140_1st
KNTC1_N
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
115606271
NCBI-ProteinID:
XP_030337748
UniProt:
A0A672THT8
LinkDB
All DBs
Position
1:complement(20365937..20387837)
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AA seq
444 aa
AA seq
DB search
MRVKVLSRNPDDYVRETKLDLQRVPRNYDPALHPFEVPREYVRALNATKLERVFAKPFLG
SLDGHRDGVNCMAKHPKSLSTVLSGACDGEVKIWNLTKRQCIRTIQAHEGFVRGICARFC
GTSFFTVGDDKTVKQWKMESPEYGEEEPIHTILGKTVYTGIDHHWKEAVFATCGQQVDIW
DEQRTSPMCSLTWGFDSISSVKFNPIETYLLGSCASDRNIVLYDMRKSTPLKKVILNMRT
NTLCWNPMEAFIFTAANEDYNLYTFDMRFLESPVMVHMDHVSAVLDVDYSPTGKEFVSAS
FDKSIRIFPVDKGHSREVYHTKRMQHVITVKWTSDSKYILCGSDEMNIRLWKANASEKLG
VLAPREKAAMNYNQKLKEKFQYHPKIRRIAQHRHLPKSIFCQIKEQRIMREARRRKELNR
RKHSKPGSVPLVSERKKHIVAVVK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagggtcaaggtgctgagccgcaaccccgacgactacgtccgagagacgaagctggac
ctgcagcgcgttccaagaaactatgaccctgcattgcacccttttgaggttccacgagag
tacgtaagagctctgaatgcaacaaagctagaacgtgtgtttgcaaaaccctttcttggc
tcacttgatggccacagagatggagttaactgcatggccaaacatccaaagagtttgtct
acagtgctgtctggagcttgtgatggagaggttaaaatttggaacctgaccaaacgacag
tgtattcgtactatacaagcccatgaagggtttgttcgaggcatatgtgctcgtttctgt
ggtacatcattcttcactgttggcgatgacaaaacagtgaagcagtggaaaatggagagc
ccagaatacggagaagaggagccgattcatacaattcttggaaagacagtgtatacagga
attgatcaccactggaaggaagctgtttttgccacctgtggccagcaagtggacatttgg
gatgaacaaaggacaagtcccatgtgttctctgacatggggttttgatagcataagcagt
gtaaaattcaatcccattgagacataccttttgggaagctgtgcttctgacagaaatatt
gtgctatatgatatgagaaaatcaactccattaaagaaggttatcttgaacatgaggaca
aatacactgtgttggaaccctatggaagctttcatttttactgcagcaaatgaagattac
aacttatatactttcgatatgcgctttctcgaatcacctgtgatggtgcatatggatcac
gtgtctgctgttcttgatgtggattattcacccactgggaaggagtttgtctctgccagc
tttgataagtctatccgcatttttcctgtagacaaaggtcacagcagggaggtgtatcat
acaaaacgaatgcagcacgtcatcacagtaaaatggacttcagatagcaaatacattctg
tgcggctcagatgagatgaatattcgtctgtggaaagctaatgcttcggaaaaactggga
gtgcttgcaccacgagagaaggcagctatgaattacaatcagaagctgaaagagaagttc
cagtatcacccaaagatcaggcgcatagctcaacaccgtcacttgcctaaaagtatattt
tgccaaatcaaggagcagcgtatcatgagagaagctcgtcggcgaaaggaactgaatcgt
cgtaagcacagcaaaccaggatctgtgccacttgtgtcagagaggaagaaacatattgtg
gcagtagtgaaataa
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