Strigops habroptila (Kakapo): 115606328
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Entry
115606328 CDS
T08851
Symbol
NPAS3
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shab03000
]
115606328 (NPAS3)
Transcription factors [BR:
shab03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
115606328 (NPAS3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
bHLH_NPAS4
DUF7510
Motif
Other DBs
NCBI-GeneID:
115606328
NCBI-ProteinID:
XP_030337936
UniProt:
A0A672TP79
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Position
4:complement(38972000..39586399)
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AA seq
944 aa
AA seq
DB search
MIRIFPDFSVQVTAAAAGGAAGGVPAAPGMGRAGAAANGNPQNVQGITSYQQRITVQHPL
PNQSECRKIYRYDGIYCESTYQNLQALRKEKSRDAARSRRGKENFEFYELAKLLPLPAAI
TSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVIGAQRRRSPSALAIE
VFESHLGSHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSSVFDYVHPGDHV
EMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPVESASPSLLTTDNTLERSFF
IRMKSTLTKRGVHIKSSGYKVIHITGRLRLRVSLSHGRTVPSQIMGLVVVAHALPPPTIN
EVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLD
LLNKGQCVTKYYRWMQKNGGYIWIQSSATIAVNAKNASEKNIIWVNYLLSNPEYKDTPMD
IAQLPHLPEKTSESSETSDSESDSKDNSEDNENSKSDEKGNQSENSEDPESDRKKSGNQS
DNEMNCNDDGNSSSNQDSRDSDDSFENSDFENQKAPEDSFGTLGSMQIKVERYVESESDL
RLQNCESLTSDSAKDSDSAGEVNAQSSSKHQKRKKRRKKQKGGSMTRRRLSSTSSPNGLD
PALVDQPQLLSSPNSASVLKIKTEISEPINFDNDSSIWNYPPNREISRNESPYSMTKPPS
SEHFPSPQASSSLHVSIPDSVLTPPGTENTASRKTQFSTSSNSALAPVSSDPLSPPLSAS
PRDKHPGGPTASNSLLYTGDLEALQRLQAGNVVLPLVHRVTGTLAATSTAAQRVYTTGTI
RYAPAEVTLAMQGNLLPNTHAVNFVDVNSPSFGLDPKTPMEMLYHHVHRLNMSGPFGSAV
SGASLTQMPAGNVFTTAEGLFSTLPFPVYSNGIHTTQTLERKED
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatcttcccggatttcagcgtgcaggtgacggcggcggcggccggcggggcg
gccgggggggtgccggcggcgccgggcatggggcgagccggcgccgcggccaacggcaac
ccgcaaaacgtccagggcatcacctcctaccaacaacgaataactgtccagcatcctctg
cccaaccaatcagaatgtaggaaaatctaccgatatgacggaatctactgtgaatctacc
taccagaatttacaagctctgaggaaggaaaagtccagagatgctgctcgctctcgccgg
ggaaaggagaattttgaattctatgagttggcaaagttgttgccactgcctgcagccatt
accagccagcttgacaaggcatccatcatccgacttacaattagctatctgaaaatgcgg
gactttgctaatcaaggcgatcctccatggaacttgagaatggaaggacctccacctaat
acatcagtaaaagttataggtgcccagcgcaggagaagtcccagtgcccttgccattgaa
gtatttgaatcacatttgggaagtcatattttacagtccctggatggatttgtatttgca
ctaaatcaagaaggaaaatttttgtacatttcagaaactgtctccatctatttaggcctg
tcccaagtggaactgacaggcagcagtgtgttcgactacgtccacccaggagaccatgtg
gagatggcagagcagctgggcatgaagcttcccccggggcgaggccttctctcacagggt
acagcagaggatggagccagctcagcatcctcatcttcccagtctgagacccctgagcca
gtggaatctgcaagccccagtttactaaccactgacaacactctagagcgctcttttttc
atccgaatgaaatctacactgaccaagcgaggagtgcacatcaaatcgtcaggatacaag
gtgattcatataacaggccggttacgtctgagagtgtcactgtcccacggacggacagta
cccagccaaatcatgggacttgttgtcgttgctcatgctttgccacctcctacaattaat
gaagtcaggattgactgccacatgtttgtcactcgtgtgaatatggacctcaatatcatt
tactgtgaaaataggattagtgattacatggatctgacccctgtagatattgtaggaaag
agatgttaccacttcattcatgctgaagatgtggaaggcatcagacatagtcacttagac
ttgctgaataagggtcaatgtgtaacaaagtattaccgctggatgcagaagaatggagga
tacatctggatacagtctagcgcaaccatagctgtcaatgccaagaacgcaagcgagaag
aatatcatctgggtcaattaccttcttagtaacccagagtacaaggacactccaatggat
attgcacaacttcctcatctgccagagaaaacctcagaatcctcggagacctctgactct
gaatcggactcaaaggacaactcagaggacaatgagaactcaaagtcagatgagaaagga
aaccaatcagaaaacagtgaagaccctgaatctgacaggaaaaagtcaggaaatcagtca
gataatgaaatgaactgtaatgatgatgggaacagctccagcaaccaggacagcagggac
agtgatgacagctttgaaaactctgacttcgaaaatcaaaaggcccctgaggacagtttt
ggcactcttggctctatgcagatcaaggtggagcgctatgttgagagtgagtcagatttg
cggttgcagaactgtgaatcactgacctcggacagtgccaaggactcagacagtgcagga
gaagtaaatgcccagtcttccagcaaacatcaaaagaggaagaagaggagaaaaaagcaa
aagggaggcagcatgacccggagaaggctgtcaagcacctcaagtccaaatggacttgac
ccagctttggtagaccagccccagctgctctcgtcaccaaacagtgcctcagtgctcaaa
attaaaacagaaatctcagaacctatcaattttgataacgatagcagtatttggaattac
ccacccaacagggaaatctcaaggaatgaatcaccctacagtatgaccaagccccccagc
tccgagcacttcccttccccccaagccagcagtagtttacatgtctccattccagactcc
gttctcaccccgccagggactgaaaatactgccagccgtaaaactcagttcagcacctca
tccaactcggccttggctcctgtgtcctctgaccctttgtcacccccactttcagcatct
ccacgggacaaacatccaggaggtcccacagcttccaactctttgttgtacactggggat
ctggaagcccttcagaggttacaagcaggcaatgtggtgcttcctttggttcacagggta
acaggaaccctagccgcgaccagcactgctgctcagagggtctacaccactggcactatt
cggtatgctccagctgaagttactttagccatgcagggcaacctcctccccaacacccat
gctgttaactttgttgatgttaacagccccagctttgggctggatcctaaaacaccgatg
gaaatgctctaccaccacgttcaccgactcaatatgtcgggaccgtttggaagtgctgtg
agcggggccagtctgacccaaatgcctgcagggaatgtgttcacaactgccgaaggactt
ttttccactcttccatttcctgtgtacagcaacggcattcacactacacagactctggaa
cggaaagaggattga
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