Strigops habroptila (Kakapo): 115606502
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Entry
115606502 CDS
T08851
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03440
Homologous recombination
shab03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115606502 (TOP3A)
03460 Fanconi anemia pathway
115606502 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shab03032
]
115606502 (TOP3A)
03400 DNA repair and recombination proteins [BR:
shab03400
]
115606502 (TOP3A)
Enzymes [BR:
shab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
115606502 (TOP3A)
DNA replication proteins [BR:
shab03032
]
Eukaryotic type
DNA Topoisomerases
115606502 (TOP3A)
DNA repair and recombination proteins [BR:
shab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
115606502 (TOP3A)
FA (Fanconi anemia) pathway
115606502 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
115606502
NCBI-ProteinID:
XP_030338361
UniProt:
A0A672UIQ0
LinkDB
All DBs
Position
4:complement(83689806..83701027)
Genome browser
AA seq
1020 aa
AA seq
DB search
MNVQARVFAGCGLRMRPQPWRLFSRAAGEDAALQRVRKVLCVAEKNDAARGIAELLSNSR
MRRREGFSKFNKIYEYDYQMFGQNVTMVMTSVSGHLLAHDFKMPFRKWTSCNPLSLFDAE
IEKYCPENYVDIKRTLEREIQQCQALVIWTDCDREGENIGFEIIHVCKAVKPNLRVFRAR
FSEITLHAVRTACENLTQPDQKTSDAVDVRQELDLRIGAAFTRFQTLRLRKIFPDILADQ
LISYGSCQFPTLGFVVERFKAIQAFVPEAFYKIKVTHDHEDGSVVFNWKRNRLFNHTACL
VLYQMCMEDPVATVVEVGSKPKSKWRPLPLDTVELEKLASRKLKINAKETMRISEKLYTQ
GFISYPRTETNVFPKELNLSALVQQQTQDPNWGAFAQRILDQGGPTPRSGNKSDQAHPPI
HPTKYTANLQGNEQRLYEFIVRHFLACCSQDAKGQETTVEIDIANERFVAQGLMILARNY
LEVYPYEKWSDKVIPLYQKGSRFQPTTVEMVDGETSPPLLLTEADLIALMEKHGIGTDAT
HAEHIETIKTRMYVGLTDDQRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICE
GKKDKSVVLQQQVQKYKEVFIEAVARANKLDQALAQYFGEATGTAEQEEVYPAMPVSIRK
CPQCNNDMVLKTKKNGGFYLSCMGFPACKTAVWFPDFVLDVARDESICAVCEPQPVHRLK
FKFKRGSVPPVMPLEFVGCIGGCDDMLKELLDLKYLHRSQPTSSAGQEANHSQVSNSFNR
ASGENRHMRGTTNLAPRHLLSMSSTRTPRAALSAAPDDGNNAVVCNCGNEALLLTVRKEG
PNQGRQFYKCSASTCNFFLWADQQPEDRNNVAPWGSALPQPSAGRGPAGFQRPRGGGRGP
ELFGSSSSDPGGGTMCSCGQPAVTRTVQKDGPNKGRQFHTCSKPRDQQCGFFQWADENTA
PGPSGDVSLNPFDSSGFSRGLGSKAKRPGSLSSGAAAKKPRTCSICHQPGHTRKTCPQNH
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtccaggcgagggtgttcgccggctgcgggctcaggatgcggccccagccctgg
cgcctcttctcccgcgctgcaggggaggacgcggcgctgcagagggtccggaaggtgctg
tgcgtggcggagaagaacgatgccgcccggggcattgcggagctgctctccaacagcagg
atgcggcggcgtgaagggttctccaagttcaacaagatctatgaatacgactaccagatg
tttggccagaacgttactatggtgatgacatctgtgtcaggacatttactggctcatgac
ttcaagatgccctttcgcaaatggactagctgcaaccctctatctctttttgatgctgaa
attgagaagtattgccctgaaaattacgtggatatcaagagaacccttgaacgagaaatc
cagcagtgccaagctctggtgatctggactgactgcgaccgagaaggagagaacattggc
tttgagataatccacgtttgcaaagctgtaaagccaaacctccgtgtgttccgagcccgt
ttctcagagatcacactccatgctgtcagaacagcatgtgagaacctcacccaacctgat
caaaaaacaagtgatgccgtcgatgtcaggcaggagctggacctcaggataggtgctgcc
ttcaccagattccagacactgaggctgcggaagatcttccctgatatcttggcagatcag
ctgatcagctatggtagctgccagttcccaacactgggctttgtagttgaacgctttaaa
gccatccaggccttcgttcctgaagccttctataaaataaaagtgacacacgatcatgaa
gatggcagcgtggtcttcaactggaagaggaaccggctcttcaatcacacagcatgcctg
gtcctctaccagatgtgtatggaggatccagtagcaactgttgttgaggttgggagcaag
cccaagagcaaatggaggcccctgcccctggacactgtggaacttgagaagttggcttcc
cgcaaactgaagataaatgcaaaggaaaccatgaggatatcagaaaaactctatactcaa
gggttcattagctacccccgaacggagaccaacgttttccccaaggagctgaacctctct
gccttagtacaacagcaaacccaggacccaaactggggagcatttgcacagaggattttg
gatcagggtgggccaacccctcggagtggaaacaaatcagaccaggctcaccctcccatt
caccccaccaaatacactgctaacctgcagggcaatgagcagaggctgtatgagttcatt
gtgcgccatttcttggcttgctgctctcaagatgccaagggccaggaaaccaccgtggag
attgacattgccaacgagcgattcgttgctcaaggactgatgatcctggcccgaaattac
ctggaagtctatccttatgagaagtggagtgataaggttatcccactgtatcagaaaggg
tctcgctttcagcctactacagtggagatggtggatggggaaaccagccccccgttgctc
ctcacagaagcggatctcattgctctcatggagaaacatggcattgggactgacgccact
cacgccgagcacatcgagacgataaagacacggatgtacgtgggcctcacagatgatcag
cggttcctcccaggccacctgggcatggggctggtggaaggctacgattccatgggctac
gagatgtccaagcctgaccttcgagctgagctggaggctgatctgaaactgatctgtgag
gggaaaaaagacaagtctgtagtgttgcagcagcaggtccaaaagtacaaggaagtcttc
attgaagctgtggccagagccaacaagttggaccaggccctggctcagtattttggagaa
gccacaggaactgcagagcaggaggaggtctatccagcaatgcccgtttccattcggaag
tgtccacagtgcaacaatgacatggtgctgaagaccaagaagaatggcgggttctatctc
agctgcatgggctttccagcttgtaaaactgcagtctggtttcctgactttgtgctggac
gtggccagggatgagagcatctgtgctgtgtgtgaaccacagccagttcacagactgaag
tttaagttcaagagaggcagcgttccacccgtgatgcccctggagtttgttggctgcatt
ggaggctgtgatgacatgctcaaagagctcctggacctgaagtacttacacagatcccaa
cccacatcatcagccggccaggaagccaaccactcgcaggtcagcaactcctttaacaga
gctagtggtgaaaacaggcacatgagggggaccacaaacctggcaccaagacatctgctc
tccatgagctccacaagaacacccagagctgctctttcagctgctccagatgatgggaac
aacgcagtggtgtgcaactgtgggaatgaagccctgctgctcactgtgcgcaaagagggg
cccaaccaaggcaggcagttctacaaatgcagcgccagcacctgcaacttctttctctgg
gctgatcagcagccagaggacagaaacaacgtggctccatggggctctgcactgccccag
ccctctgcaggaaggggcccagcaggatttcagcgcccaagaggaggagggagaggccca
gagctctttggaagcagcagctcggatccaggaggcggcacgatgtgcagttgtggccag
ccagctgtcacacgcactgtccaaaaggatgggcccaacaaagggaggcagttccacacg
tgctcgaaaccccgggaccagcagtgtggcttcttccagtgggcagatgaaaacacagct
ccagggccttctggagatgtctctttgaacccttttgacagcagtggattctcaagaggg
ttgggaagtaaagccaagagaccaggcagcctctcctcaggagccgctgccaagaaacca
cggacctgcagcatttgccaccagcctggccacactaggaaaacctgccctcaaaaccac
tga
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