Strigops habroptila (Kakapo): 115606540
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Entry
115606540 CDS
T08851
Symbol
VPS35L
Name
(RefSeq) VPS35 endosomal protein sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115606540 (VPS35L)
Membrane trafficking [BR:
shab04131
]
Protein recycling
Others
Retriever complex
115606540 (VPS35L)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Far-17a_AIG1
DUF5667
Motif
Other DBs
NCBI-GeneID:
115606540
NCBI-ProteinID:
XP_030338490
UniProt:
A0A672TMA9
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Position
4:77500365..77555568
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AA seq
963 aa
AA seq
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MAAFPWHARSRNYVSESEMCKLESIPLDFGDYHPLKPITVTESKTKKMNRKGSTSSTSSS
SSSSMLDPLSSVLDGTDPLSLFAAAADPVTTAATMDSTRKKRDKDDSSAVGSDFEPWSSK
RGDILARYTTTEKLSINLYMGSEKGKATTTGSAVSEKVRTRLEELDDLEEGSQKELLNLT
QQDYMNRIEELNQSLKDAWSSDQKVKALKIVIQCSKLLSDTTVIQFYPSKFVLITDILDT
FGKLVYERILSMCMDSRVSLPDNFSPESVNDTAKETCLNWFFKIASIRELIPRFYVEAAI
LKCNKFLSKMGISECLPRLTSMIRGIGDPLVAVYARAYLCRVGMEVAPQLKESLNENFFD
FLLTFKQIHGDTVQNQLVVQCVEIPLYLTLYSPAIDWILQCIAYRAPEVLLTEMMERCKN
LGNNALLLNSIMSAFRAEFIAARSMDFIGMIKECDESGFPKHLLFRSLGLNLALADPPES
DRLQILNEAWKVITKLKNPQDYINCAEVWVEYTCRHFTKREVNTVLADVIKHMTPDRAFE
DAYPQLQSIIQKVITYIYDFSLLFSVEKFLPFLDMFQKESVRVEVCKCIMESFIKHQQES
TKDPVILNALLHICKTMHDSVNALTLEDEKRMLAALINGFIKMVSFGRDFEQQLSFYVEA
RSMFCNLEPVLVQLIHSVNQLAMETRKVMKGNHSRKTAAFVRACVAFCFITIPSLSGIFT
RLNLYLHSGQVALANQCLSQADAFFKAAVSLVPEVPKMINVDGKMRPSDTFLLEFLCNFF
STLLVVPDHPEQGVLFLVRGLLNVIQDYTWEDNSDDKVRIYTNVLHLLSAMTQEAYIYHV
DKVDSNDTLYGGDSKFLTEINKLCETVIAQILDHLKTLGKEETLKRQSQLALHFFNTILA
HGDLRNNKLNQLSVNLWNLAQKHGFADTSTMVTTLEYIKKRSKQPEMSHFTDLALRLPLQ
SRT
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggctgccttcccgtggcatgcgagatcaagaaactatgtttcggaatctgaaatgtgc
aaactggaatccatacccttggattttggtgattaccatccgctaaagcccattacagtt
actgaatccaagaccaagaaaatgaaccggaaaggaagcacttcttctacatcctcttcc
tcttccagttctatgctggatccactgagcagtgtactggatggtaccgatcccttgtca
ttgtttgcagcagctgcagatcctgtgactactgctgcgaccatggatagcacacgaaag
aaacgggataaagatgacagctcagcagtaggaagtgactttgaaccatggtcaagcaaa
cgtggtgacatccttgctagatacacaacaacagagaagctttctattaatctgtacatg
ggatctgaaaaaggaaaagctactactactggctcagcagtttctgaaaaagtgaggaca
aggttagaagaactggatgatctggaagagggctcacagaaagagctgttgaatttgact
cagcaggattacatgaaccgaattgaagaactgaaccagtctttaaaggatgcttggtca
tctgatcagaaagtaaaagctctgaaaatagtcatccagtgttcgaagcttctttcagac
acgacagtaatccagttctatccaagtaaatttgttttaattacagatatcctcgatact
tttgggaaactggtgtatgaaaggatcctgtcaatgtgcatggacagccgtgtctctttg
ccagataatttttctccagagagtgtgaatgacacagccaaagaaacttgcttaaactgg
tttttcaagattgcttccatcagagaactcattcccagattttacgtggaagcagcaata
ctgaagtgcaataagttcctgtcaaaaatggggatttcggaatgtctcccacggttaaca
tctatgattagaggaattggagatccactggttgcagtctatgcaagagcatacctttgc
agggttggaatggaagtggcaccacaactcaaagagagccttaacgaaaatttctttgac
tttcttctaacatttaaacaaattcatggcgacacagttcagaatcagctggtagtacaa
tgtgtggagattcctttgtatttgactctatattctcctgctatagactggattttacag
tgtattgcatatcgtgctcctgaggttctgcttactgagatgatggagagatgcaaaaat
ttggggaacaatgctttgctgttgaattcaataatgtcagcattcagagcagagtttatt
gctgcaagatctatggacttcattggcatgattaaagagtgtgatgaatctggattccca
aagcatctcctctttcgctccttgggattaaacttggcattggctgatcctcctgaaagt
gatcgtcttcaaatattaaatgaagcctggaaggttataacaaagctgaagaacccacag
gattatatcaactgtgctgaagtgtgggtggagtacacatgcaggcattttacgaagcgg
gaggtcaatacagttttggctgatgttatcaaacacatgacccctgatcgagcatttgaa
gatgcttacccccagctgcagtcaattattcagaaagttattacctatatctatgacttc
tctttgcttttttcagtggagaaattcttgccatttctggatatgttccagaaggaaagt
gtgagagtggaggtttgcaaatgcattatggaatcttttattaagcatcagcaggaatct
acaaaggatccagttatactcaatgctcttctgcatatctgcaagacgatgcatgattct
gtgaatgcactaacacttgaggatgagaaaagaatgttagcagctttgataaatgggttc
ataaaaatggtttcatttggccgtgactttgaacaacagctgagtttctatgttgaagcc
aggtcaatgttttgcaatctggagcctgttttagtccagttgattcattccgtgaaccag
ctagcgatggaaacaagaaaggtgatgaagggaaatcattccagaaagactgctgcattt
gtcagggcttgtgttgccttctgcttcattacaattccatctctgagtggtatcttcaca
cgccttaatctgtatctacactctggacaggtcgctctggcaaatcagtgcctttcacaa
gctgatgcttttttcaaagctgcagtgagccttgttcctgaagtgccaaaaatgatcaat
gtcgatggaaagatgcgaccctctgataccttcctcctggaattcctttgtaattttttc
tccacgttattagttgttccggaccatccagaacaaggagtgttgtttctcgtgcgagga
ttactaaatgtcatccaggattacacttgggaggataacagtgatgacaaagtcaggatt
tatactaatgttttgcatctgctgtctgcgatgacgcaggaagcatatatctaccatgta
gataaagttgattctaatgataccctgtacggtggagactccaagttcctgactgaaatt
aataagctgtgtgaaacagtgatagcacagatcctggatcatctgaaaacccttggaaaa
gaggagaccctaaagcggcagagccagctggcactccatttctttaacactattctagct
catggggatctacgaaacaacaaactaaaccagctttcagtcaatctctggaatcttgct
cagaagcatggctttgctgacaccagtacaatggtgacaacactagaatacatcaagaag
cgaagcaaacaacctgaaatgagtcacttcacagacttggcccttcggcttcctctgcag
tccaggacctga
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