Strigops habroptila (Kakapo): 115606548
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Entry
115606548 CDS
T08851
Symbol
REXO5
Name
(RefSeq) RNA exonuclease 5 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115606548 (REXO5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shab03009
]
115606548 (REXO5)
Ribosome biogenesis [BR:
shab03009
]
Eukaryotic type
Pre-60S particles
RNases
115606548 (REXO5)
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GFIT
Motif
Pfam:
RRM_1
RNase_T
Na_H_antiport_3
TMF_DNA_bd
EzrA
RRM_YTH1
Motif
Other DBs
NCBI-GeneID:
115606548
NCBI-ProteinID:
XP_030338509
UniProt:
A0A672TMK3
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Position
4:77874781..77902703
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AA seq
771 aa
AA seq
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MAKAGCLNGCKRPTGEGTAGQADRKRRKADGGGRGPEEKSSRLSAALFGEDCEISHDQLY
ELLKYAALGKRHNATQPSWCRISHQSHLAGVVVIVLHEMSQLHFYKFYLQFKHLRKVFQH
RFILTPSTNFFASLYGEGANLKPQNTAQGLTSTGSECIPKNSDLQCDPIIRKYGEKTQGL
TSYILTSEEQRKNDYPIKGSPGCKGYIYTECDQQRTDSSPLFGLDCEMCLTAKGNEVTRV
SLVDARGQCLLNELVKPESRVMNYRTRFSGVTKKMLLPVKTRLSDIQTRLKEMLPHDAVL
VGHSLNADLQALEMIHPSVIDTSLLFARNEGRRFKLKFLAKAVLGKEIQCEQKLGHDPAE
DARAALELAQFFIEQGPAKVAELNLEMLLTTEKLAEDSQNKAALHPQGCRVQKQLNEPPH
LSKPCFLDCLKVTGQKPVLLGRQGLDSSSLCQSNLSTSNKQILQRALEDVPLSTFSIIQF
SLGPEYIASHLLALCEQVRSKLTDMLTIYAGPFEEGFCLHSVKKEFGRCGPIQSLTVVTE
TYQPYVCIQYEVLEAAQLAVESLNGAEVAGSCIKVQRPVTAAMLDCDILIKELELDVENE
GVIYVAGLKKSLTEMDLQEEFSQLKDLETLFLPKDLQSGKHRNCCFLKFQESQSAADALE
VINAWTLKGSKLRSRNALASGHLWRWIWQMNHSNGNQRAHILYEKMEQLSDSEQDLRKKV
KKLDHHIKKLYRSLQNNTLCVVLFPGVNSRHGAQPGLGLMAVKDDRGRSAY
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggctggctgcctgaacgggtgcaagaggcccaccggcgagggcacggcggga
caggcggatcggaagaggaggaaggcggatggcggcggccggggtcctgaggaaaagtca
tctcgcttgtcagcagctctgtttggtgaggactgtgagatcagccacgaccagctgtat
gagttgttgaagtatgcagctctgggaaagcgccacaatgcaacacagcccagctggtgc
cgtatttctcaccaaagccacctggctggggtcgtggttattgttctacatgaaatgagc
caactccatttctacaaattctatttgcagttcaaacacctcaggaaagtgttccagcat
agattcatattaacaccttcaactaactttttcgccagcctgtatggagaaggagcaaac
ctgaaacctcagaacactgcacaaggtttgacttccactggcagtgaatgtattccaaag
aactcggacttgcaatgtgatcccatcattcggaaatatggagaaaaaacccaaggcctt
actagctatattctaacttcagaagagcagaggaaaaatgactatcccataaaaggctcc
cctggatgtaagggctatatatatacagagtgtgatcagcagaggacagacagcagcccc
ctctttggtctggattgtgaaatgtgcctgactgcaaaagggaatgaagtcactcgtgtc
tctttggtggatgcacggggtcaatgcctcttgaacgaactagtcaaacctgaaagcaga
gtaatgaactaccgcaccagattctcaggagtcacaaagaaaatgcttcttccagtgaaa
acaagactgtcagacatccaaaccagactaaaagaaatgcttccccatgatgcagtattg
gtgggtcattctctaaatgctgatcttcaggctttggaaatgatccaccccagtgttatt
gacacttcattgctatttgccagaaatgaaggtcgaagatttaagctcaaatttctagcc
aaagctgttttagggaaggagattcagtgtgaacagaagcttgggcatgatcctgcagaa
gatgctagagctgcattggaattggctcaattctttattgagcaaggaccagcaaaggta
gcagaactaaacttggagatgcttctgacaactgaaaaactggctgaggactcacagaac
aaagctgcattacatccacaaggatgtagagtccagaaacagttgaatgagcctccacat
ttatccaaaccatgttttttagactgcttgaaggtgactggccaaaaacccgttcttttg
ggcagacagggactagactcttctagcctgtgtcagagtaacctgagcacttcaaacaaa
cagattcttcagagagccttagaagatgttcccctgtccacattcagtatcattcagttc
agtttgggtccagagtacattgcatctcaccttcttgcactttgtgaacaggtgagaagc
aagctgactgacatgctgacaatttatgcaggtccttttgaagaaggcttttgcctacac
tctgtgaaaaaagaatttgggaggtgtggaccaatccagtctcttacagtggtaactgaa
acataccagccttatgtctgtatccaatatgaagtgctggaagctgcccagcttgctgtg
gaaagcctaaatggagctgaggtagcaggatcctgcattaaggtccagagacctgtcact
gcagcaatgctggactgtgacattttgataaaggaactagaactggacgtagaaaatgaa
ggtgtgatttatgtggcgggtctgaagaagtcattaacagagatggacttgcaagaagaa
tttagccagttaaaagacctggaaacactgtttctgccaaaggacctccagagtggcaag
cacaggaactgctgtttcctcaaattccaggaatcacagagtgctgcggatgcccttgaa
gttataaatgcatggactttgaagggtagcaaactaagaagtaggaatgctctcgcttca
ggtcacctctggagatggatttggcaaatgaatcacagcaatggaaatcaaagagcacat
atcttatatgagaagatggagcaactgtctgactctgagcaagatctgaggaagaaggtg
aagaagttagaccaccatatcaaaaagctttatagaagtcttcagaataataccctgtgc
gttgttctctttcctggagtgaacagcaggcatggagcacaacctggccttggtctgatg
gcagtaaaagatgacagagggaggagtgcttattga
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