Strigops habroptila (Kakapo): 115606558
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Entry
115606558 CDS
T08851
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04136
Autophagy - other
shab04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115606558 (ATG13)
04136 Autophagy - other
115606558 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115606558 (ATG13)
03029 Mitochondrial biogenesis [BR:
shab03029
]
115606558 (ATG13)
Membrane trafficking [BR:
shab04131
]
Autophagy
Autophagosome formation proteins
ULK complex
115606558 (ATG13)
Atg1 complex
115606558 (ATG13)
Mitochondrial biogenesis [BR:
shab03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
115606558 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
115606558
NCBI-ProteinID:
XP_030338543
UniProt:
A0A672TTG6
LinkDB
All DBs
Position
4:complement(5972130..5995299)
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AA seq
549 aa
AA seq
DB search
MDTDLSSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRAGEDNGAV
YPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPPPVVTDTLKVPVMGLAFSHQLSSSR
LSYQPAALGVGSADMGYPVLFAGGLNAAQPHQLIGPGKEGGVPPIPSQPAHGTQADQERM
CTPLDGGHYSAATPSSSEDTETVSNSSEGKCGSPHDLLETIFIRKVGAFVNKPINQVTMA
NLDIPFAMFAPKNVELEDNDPMVNPPDSPETESPLQGSLHSEGSSGSSTGNTHDDFVMID
FKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVKE
FDAFVETLQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggacactgatctcagttcgcaggacaggaaggacctggacaagttcatcaaatttttt
gctttaaagacggtacaagtgattgtccaggcccgacttggagagaaaatctgtacccga
tcgtcatcctccccaacaggctctgactggttcaatttggcaatcaaagatataccagag
gttactcatgaagcaaagaaagccctggcaggacagctccctgctgttggacggtccatg
tgtgtggagatttctctcaaaacctcagagggggactccatggagctggaaatttggtgt
ctagaaatgaatgagaagtgtgacaaagaaatcaaagtttcatacaccgtgtacaacagg
ctgtctctgctgctgaagtctttgcttgctataaccagggtaactccagcctacagactg
tcaaggaaacaaggccatgaatatgtaatattgtacaggatatattttggtgaagtgcaa
ctgagtggcttgggagaaggtttccagacggtccgtgttgggacagtgggtaccccagtg
ggcaccatcactttgtcttgtgcctacagaatcaaccttgctttcatgtcaaccaggcag
tttgagaggacccctcctatcatggggattatcattgatcactttgtggaccgtccctat
cccagctcttcacccatgcatccctgcaattacagagctggtgaggacaatggtgcagta
tacccctcagtagaagattcccaagaagtgtgtaccacatctttttccacctctcctcca
tctcagtgtgtttttactgtcacaaaggcacattttcagacccctcctcctgtggtgacg
gacaccctgaaggtcccagtgatgggactggccttttcacaccaactttccagctctcgt
ctttcctatcagcctgctgccctgggagttggatcagctgacatggggtatcctgtactc
tttgctggtggcttgaatgctgcacagcctcaccagttgatcggcccaggcaaagagggg
ggagttcccccaatccccagccagccagcacatggcactcaagctgaccaagagaggatg
tgcacaccactggatggaggccactactcagcagctactccttctagtagcgaggacaca
gaaacagtatcaaacagcagtgaggggaaatgtggctccccacatgaccttttggagacc
atctttatccggaaggtgggagcttttgtcaacaaacccattaaccaggtgaccatggcc
aacttagacattccttttgccatgtttgctcccaagaatgttgagctggaagataacgac
cccatggtcaatcctcctgactccccagaaactgaatctcctctacaaggcagcttacac
tcggagggctccagtggcagcagcacagggaacacccatgatgactttgttatgattgac
tttaaaccagcattttcaaaggatgacattcttccaatggacctggggacgttttaccgt
gagttccagaacccccctcaactcagcagcctctccattgacattggagcgcagtccatg
gcagaggatttggactcgttaccagagaagctggcagtccatgagaaaaatgtcaaggag
tttgatgcctttgtagaaaccttgcagtga
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