Strigops habroptila (Kakapo): 115606780
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Entry
115606780 CDS
T08851
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shab04121
]
115606780 (RBBP6)
Enzymes [BR:
shab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115606780 (RBBP6)
Ubiquitin system [BR:
shab04121
]
Ubiquitin ligases (E3)
U-box type E3
115606780 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
115606780
NCBI-ProteinID:
XP_030339113
UniProt:
A0A672VC16
LinkDB
All DBs
Position
4:85622980..85652095
Genome browser
AA seq
1847 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKRQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKATSKTYVMTPKSHKTLETAFRSRTEPVSGTSKAIDDSSA
SISLAQLTKTANLAEANASEEDKIKAMMTQSGHEYDPVNYMKKPVGPPPPSYTCFRCGKP
GHYIKNCPTNGDKNFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLTNTGKYAIPTIDAEA
YAIGKKEKPPFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTA
LLESEEHTCPTCHQTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQIQQQQQQQQQQQ
LPPPPPPPPPLMRQTITRNLQPLLRPTRPEPLMIPLASLASRSALSSLAPGPSSVAAGLP
VNPSSVVVSDLPPSVSLSLRGEKPDGPFRDDTVIPPAALVTAAELSKSSPLSITSLLEEK
GYQVPVLRQPALPSLLGPQGQSIPTTGHPMRAGTIRSAGGRPGWELSSNRGRLHGDRAQR
TQAPSLPASAPVFVPVPPPPLYPPPPHALPLPPGVPPPQFPPQFPPGQPPSAGYTVPPPG
YPPAPANMSSAWVPTAVPTAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTN
DFAKELMEYKKIQKERRRSFSRSKSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSFSRSH
SRSYSRSPPYQRRGKGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPVFRGQSPTKR
TVPQGEGEREYFNRYREVPPYDMKAYYGRSVDFRDPFEKERYREWERNYREWYEKFYKGY
AVGAQPRPPVSRENFSPERFGAPGTRRENSPYARGRREDYPGGQSHRNRSIAGNYPEKPS
GRESHGVKDPTKSKEKEVENPLGDGKGNKHKKHRKRRKGDENEGFANAEMLEGARKPREA
VATEDVKTDSLFILPSRDDATPVRDEPMEADSIAFKPVSEKEKKEKDKPKAKTDKTKRKA
EVAVPPKKDSAVKPAKASQEKVDPDREKSPRTEPPVKKVKEELPKTDSVKASSSQKDEKA
LGTPRKVHPKVTKDHTETRPAKEEKAKKDHPKETKSEKPSTKEDKTKKPAEKGKPSDAKP
EKRKRKADEKVDKEHEATSTKASKPETAESKTSPKGKAEPDGEKGERTPDKDKSAFLNNP
AKKIKLNRETGKKIVSGENVPPAKEPVEKPEPSSSKVKQEKTKGKVRRKVTAADASSSTL
VDYTSTSSTGGSPVRKPEEKTDTKRTVIKTMEEYNNDITAPAEDVIIMIQVPQSKWDKDD
FESEEEDIKSTQVPTNIGKPASVIKNVSAKPANPIKHSEKETEPLEKAQKSTKEASYESS
QHDAKSSKSSVSSEKGKAKERDHSLSDKDTSEKRKSSAQPEKDHSERAAEPGNGKTISQS
SKESRSSEKHDPGRGSTAKDFTPNRDKKSDHDGNRDHSSSKRRDEKSELARRKDSPSRNR
DSASTQKSKPREERAEPSKKGTGEAKRSSYSPSRERKQSEHKAAHDSKRTSDEHKSLEKN
SGKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKE
KEKEKEKHLPELKSNKEKEPGVTKPPVKQESPEAKNEKENVAGQNDKGVVKPKPQVSSSS
RLSSDLTRETDEAAFVPDYNESDSESNVSAKEEEAAGKTPKEQKEKAVEKVKEDAAAPPA
AEQPEASRSQSQSSPSVSRSRSHSPSESQTRSHSSSASSGESQDSKKKKKKKEKKKHKKH
KKHKKHKKHLGNETELEKSQKHKHKKKKSKKSKDKEKDDQKVKSVTT
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcgtgcactacaaattctcgtccaagctcaactatgacacggtcaccttcgac
ggcctccacatctccctgtgcgacctcaagcgccagatcatgggccgcgagaagctgaag
gcggccgactgcgacctgcagatcaccaacgcccagaccaaagaagaatacacagatgat
aatgccctgattccgaagaactcatctgtaattgtgagaagaatccctatcggcggagtg
aaagctaccagcaaaacatacgttatgactcctaaatcgcacaaaaccctagaaactgct
ttcagaagtcgaactgagccagtgagtggaacatcaaaagcaattgatgactcttctgca
tctatttctctggcccagcttactaagaccgccaatctggctgaagccaatgcttccgaa
gaagataaaataaaagctatgatgacacagtctggccatgaatatgatccagtcaattac
atgaagaagcccgtgggtccgcctccaccatcgtacacttgctttcgctgtgggaagcct
ggccactatataaagaactgcccaacaaatggggacaaaaactttgagtctgttcccaga
attaaaaagagcacaggaattccaaggagtttcatgatggaggtgaaagatcccaacacc
aagggtgccatgctcacaaacactggaaaatacgccataccaaccattgatgcggaagct
tatgctataggaaagaaggaaaagcctccttttttaccagaggagccatcctcctcctca
gaagaagacgatcctattccagatgagctgttatgtctcatttgtaaagatatcatgacg
gatgcagttgttattccctgctgtgggaacagttattgtgatgaatgtattagaacagca
ttactggagtctgaggaacatacgtgcccaacgtgtcatcagacagatgtttctcctgat
gctttaattgccaacaagttcttacgccaggctgtgaacaacttcaaaaatgaaactggc
tacacaaaaaggctccgtaagcagattcagcagcaacagcagcagcaacagcagcagcag
ctgccaccaccgccaccacctccaccacctctcatgaggcaaacaataacacgcaacctg
cagcctctgctccggccaacaagaccggaaccactaatgattccgttagcttctctggct
tctcgttctgctctgtcatccttggctccaggtccatcatctgtggcagctgggctgccc
gtaaatccatcttctgtcgtcgtctctgatctccctccatcagtgtccctgtctctccgt
ggtgaaaagccagatggaccttttcgtgatgatactgttatacctcctgctgctctggtg
actgccgctgagctttctaaatcttcccctctgtcaatcaccagtctgttggaagagaag
ggctatcaggttcctgtactgagacaaccagcattaccaagtcttctgggccctcaagga
caatcaatacccacaactggtcatcccatgagagctggaaccattcgctcagcaggcggc
agaccaggctgggaactaagttcaaatcgaggacgcctgcatggtgaccgtgcccaaagg
actcaggccccatcactaccagcatcagcaccagtctttgtgcctgtgcctccacctccc
ttgtatcctccaccaccacatgcacttcctcttcctcctggggtaccaccaccacagttt
cctcctcagtttccacctgggcagcctccatccgctgggtacactgtcccccctccagga
taccccccagctcctgcaaacatgtcatcagcgtgggtaccaacagcagtaccaacggct
cattccaataccatcccaacgacacaagcacctcccttatctagggaggagttttacaga
gagcaacggagacttaaagaggaggaaaagaaaaagtccaaacttgatgagtttacaaat
gattttgctaaggaattgatggaatataaaaagattcaaaaggagcgtaggcgttcattt
tccaggtccaagtctccctatagtgcttcgtcttactctaggagctcctacacctactcc
aagtcaagatcaggttcttcccgctctcgctcctactctcgctcgttcagtcgttcccat
tctcgttcctactcgcgatctccaccgtaccagagaagaggcaaagggaagagtcggaac
tatcggtctcgatcccggtcacatgggtaccaccgctccaggtcaaggtcacccccctac
cgaaggtaccactcacgatcacggtctccagtgtttcgaggccagtctcccactaaacga
actgtacctcagggggaaggagaaagggagtattttaacagatacagagaagttccaccc
tacgatatgaaagcttattatggcagatctgtggacttcagagacccgtttgagaaggaa
agatacagagaatgggaaaggaactacagagaatggtacgagaagttttacaagggctac
gcggttggtgctcaacctcgacctcccgtcagcagggaaaacttttctccagagaggttt
ggtgcccccgggaccaggcgggagaactcgccctatgctcgggggcgtagggaggattat
cctggtgggcagagccaccggaatcgtagtatagctggaaattatcccgaaaaaccctct
ggaagagagagccatggtgtcaaagatcctacaaaatcgaaagagaaggaggtggaaaat
cctctgggagatggcaagggaaataaacataaaaaacaccggaagagaaggaaaggagat
gagaatgaaggatttgctaatgctgagatgttggagggtgcgaggaaaccaagagaggcc
gttgcaacagaagacgttaaaacagactccctgttcatacttccaagcagagacgatgcc
acccctgtgagagatgagcccatggaagcagattccattgctttcaaacctgtgtctgaa
aaggagaaaaaagagaaggataagccaaaagcaaagactgacaagacgaagcggaaagca
gaagtggccgttcctcctaagaaggacagcgcagtgaagccagccaaagcttcccaagag
aaggtggaccccgaccgcgaaaagtctcctcgtacagaacctcctgtgaaaaaggtgaag
gaggagttgccaaagacagacagtgttaaagcatcttcctctcaaaaggacgagaaggct
cttggtaccccacggaaagttcacccgaaagtgacaaaagatcacacagaaaccaggcca
gccaaggaggagaaggcaaagaaagaccatccgaaagaaaccaagtcagagaagccctcc
actaaagaggacaagacaaaaaaacctgcagaaaaaggcaaaccctctgatgcaaaacct
gaaaaaaggaaaagaaaagcagatgaaaaggttgataaagagcatgaagccacttccaca
aaggcctccaaaccagaaacggctgaatcaaaaacatcgccgaaggggaaggctgagccc
gatggtgagaaaggagagagaactccagacaaggataaatctgcttttctcaacaaccct
gccaaaaagattaaactaaaccgagaaacgggcaaaaagattgtgagtggagagaacgta
ccacctgcaaaagagcctgtggagaaacctgagccgagcagcagcaaagtgaaacaagag
aaaacgaagggaaaagtgaggagaaaagtaacagcagctgatgcatctagctctactctt
gtagactacacaagcactagttctactggaggaagccctgttagaaagcctgaagaaaag
acagataccaaacgaactgtcatcaagaccatggaggagtataataatgatataacagcc
cctgctgaagatgtcattattatgatccaagtccctcagtcaaagtgggataaagatgac
tttgagtctgaagaggaagacattaaatctacccaggtgcccacaaacatagggaaacct
gctagtgttataaaaaatgtgagtgctaagccagcaaaccccataaaacacagtgaaaaa
gagacagagcctttggagaaagcgcagaaatctacaaaagaggcgagttacgaaagctcc
cagcatgatgcaaagagctcaaaaagttctgtgtcgagtgaaaaaggaaaagccaaagag
cgggatcattcgttatcagacaaggacacttctgagaagagaaagagcagtgctcagcca
gaaaaagaccactcggaacgtgcagctgagccaggaaatggaaaaaccatttcccagtct
tccaaggagagcagatcttctgagaagcacgatcctggccggggatccactgccaaggac
ttcactcccaaccgagacaagaaatctgaccatgatggcaacagagatcattctagttcc
aaacgcagagatgaaaagagtgaactagcgaggagaaaagactccccctctcgaaacaga
gactctgcatccacacagaagagtaaaccgagagaggagcgagcagagccgtccaaaaag
ggcactggagaggccaaaaggagcagctacagtccctcgcgtgagcggaagcagtctgag
cacaaagctgctcatgactccaagcgtacatcagacgaacacaaatctctagagaaaaat
tcaggaaaagaaaaggagaaggagaaagagaaagagaaggaaaaagaaaaggaaaaagaa
aaagaaaaggaaaaggaaaaagaaaaggaaaaagaaaaagaaaaggagaaggaaaaagaa
aaagaaaaggagaaggaaaaagaaaaggaaaaggaaaaggagaaggagaaagaaaaggag
aaagagaaggagaaggagaagcacctcccagaattaaagagcaataaagagaaagagccg
ggtgttaccaaaccacctgtgaaacaagaatcaccagaagcaaaaaatgagaaagagaac
gtggctggacagaacgataaaggtgttgtcaagcccaagcctcaggtgagcagctcctca
cggctctcctctgacctgacccgagagaccgacgaggctgcgttcgtcccggactacaac
gagagtgacagtgagagtaacgtatcagcaaaagaggaggaagctgcagggaaaacccct
aaagagcagaaagaaaaggctgttgagaaggtgaaggaggatgcggcggctcctcccgca
gccgagcagcctgaagccagcaggagtcaaagtcagagcagccccagcgtcagccgcagc
cgcagccacagcccgtccgagagtcagacccgaagccacagcagcagcgccagctccggg
gagagccaggacagcaagaagaagaagaagaagaaagagaagaagaagcacaagaagcat
aagaaacacaagaagcataagaaacacctcggcaacgaaacggaattggagaagagccaa
aaacacaaacacaagaagaagaaatcgaagaagagcaaagataaagagaaagatgaccaa
aaagtgaaatctgtcacgacatag
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integrated database retrieval system
