Strigops habroptila (Kakapo): 115606784
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Entry
115606784 CDS
T08851
Symbol
TRDMT1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shab03016
]
115606784 (TRDMT1)
Enzymes [BR:
shab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
115606784 (TRDMT1)
Transfer RNA biogenesis [BR:
shab03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
115606784 (TRDMT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-GeneID:
115606784
NCBI-ProteinID:
XP_030339134
UniProt:
A0A672TTB4
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Position
1:118586427..118619370
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AA seq
400 aa
AA seq
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MAPLRVLELYSGIGGMHQALKESCASAEVVAAVDVNTLANEVYKHNFPSTPLWAKTIEGI
TLKEFDRLCFDMILMSPPCQPFTRIGLQGDISDPRTKSFLYILDILPRLQKLPKYILLEN
VKGFESSSARNELLRTLATCGFTYQEFLLSPTCLGIPNSRLRYFLIAKLHQEPFSFQAPG
QILTRFPDQDLENLLKDKVANKVGETCSSLCSEEKNPDPNIGPDCSSKKSLPKGAFLFKL
ETIEEMERKHDQDNDSSIQMLKDFLEEENEEMSQYFIPPKSLLRYAFLLDIVKPTCRRST
CFTKGYGHYVEGTGSVLQTALDVQLESAFKHIEELPEEEKLMKLSMLKLRYFTPREIANL
HGFPSEFGFPDKVTVKQCYRLLGNSLNVHVVAKLISILLG
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgctgcgggtgctggagctatacagtggcatcggggggatgcaccaggccctg
aaagaaagctgtgcatctgcagaagttgttgctgctgttgatgtgaacactcttgccaat
gaagtttataagcacaactttcccagcacgccgttatgggcaaagacaattgagggcata
acactgaaagaatttgacagattatgttttgatatgattttgatgagtcctccctgtcag
ccgtttacaagaattggcctgcaaggtgatatatctgatccacggacaaagagctttctt
tatatccttgatattctcccaagactccagaagcttccaaaatacatacttttagaaaat
gttaaaggatttgaatcctcttctgcaagaaatgaacttttgcgaacactagcaacatgt
ggatttacatatcaagaatttctcttgtctccaacctgtcttggcattcccaattctagg
ctgcgatattttctaattgcaaagcttcaccaagaaccattctcctttcaagctcctggt
cagatattgacgagattcccagatcaggatctagaaaacttactcaaggacaaagtcgcc
aacaaagtgggtgaaacttgttcttccttgtgttctgaagagaagaatccagatccaaac
attggtcccgattgcagcagcaagaagagtttaccgaaaggggcctttctgtttaaactt
gaaacaatagaagaaatggaaaggaaacatgatcaggacaatgattcctctattcaaatg
cttaaagatttcttggaagaggaaaatgaagaaatgagtcagtatttcataccaccaaag
tccttgttgcgctatgctttcttattagacattgttaaacccacctgccggagatccaca
tgctttacaaaagggtatggacactatgtagaagggacaggctcagttctgcagacagca
ttagatgtacagcttgaatcagcgtttaaacatattgaggagttaccagaagaagagaag
cttatgaaattgtcaatgctaaaacttaggtacttcacaccaagagaaatagcaaatctt
catggattcccttcggaatttggctttcctgacaaagtgacagtaaagcaatgctaccgt
cttctgggaaacagcctcaacgtacatgtggtagcaaaactcatctccattctacttgga
taa
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