Strigops habroptila (Kakapo): 115606800
Help
Entry
115606800 CDS
T08851
Symbol
TMC5
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shab02000
]
115606800 (TMC5)
03037 Cilium and associated proteins [BR:
shab03037
]
115606800 (TMC5)
Transporters [BR:
shab02000
]
Other transporters
Pores ion channels [TC:
1
]
115606800 (TMC5)
Cilium and associated proteins [BR:
shab03037
]
Other cilia and associated proteins
Stereociliary proteins
115606800 (TMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
115606800
NCBI-ProteinID:
XP_030339157
LinkDB
All DBs
Position
4:77443596..77472053
Genome browser
AA seq
874 aa
AA seq
DB search
MSYHYNKAFENPDYHLSETLEINRRRSPQENLFSYQAPYGASLPGSYGEHDGREQNYPLA
IPVASMRQGSEYRGGLPRVNVLSRSPYGSFTDNLSFEPEPELAYNPPSTFHSPYTHSTSN
RSEDDFIWRRDRRPHDEIFMTSSSVFETNPVWKEEETLVGNLASMSTNERIKAIQKMPET
MKKKREIRNKVLKEITKKSRHRSTHLSCCTQCLQGIAVSFRRFGNSLSEYFHLLQLRYNT
LKVIGAEFGTSVLSYFIFLKWLLTFNIFSLLINFSFITIPQFLAAEPNNLSFTGLELLTG
AGYFQQTVLYYGFYTNATISKIKNGPSYNMQLAYIFTVGLYFVICFLILLFSIAKSFWRN
FINPQAYSVNASKLLCTWDFNITNEKAVKLKQKNLSMQIKEDLTEVNWEVLSVSAKERVV
CISINFASWVASLGTALAACAGVYFLSTNNLKLFVKGHRNDLESQAAMLVLPVVTSLLNA
FIPFFYSWLGRLERFKTPGQHIYVTITRNIILKISILGILCYYWLGIVAASESQCWETLV
GQDIYRLIVVDFIFCLLGSFFGEFLRRIIGTTVYVSLGLPEFDIGRNVLDLIYAQTLTWV
GILFSPLLPVIQIIAFSIVFYVKKVSLMMNCQPPRKVWRTAQMTTSFIFLLFFPSFVGVL
AVIGVTVWRLKPSEECGPFRGLSSMYAAVSEWIEILENYTASKWVVWIYHNLITSELFFF
ILSTLVLIVTYIYWQIIEGRKTMTKLLYKQISNEGKDKMFLLEQLRSLQRAKQTPSAPGG
QGQAGQSSSYHPSRQPAQQVPDYPGRAFDRNQNASYNNEYPDAAGILRGTGFPPGLERAQ
RSSGPGMSEAVAIALRAREAAELEDQYDDTYPQP
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcattacaataaagcctttgaaaatccagactaccacttgtcagagacactg
gaaatcaatagaaggaggagtcctcaagagaatctcttctcctaccaagccccttatggg
gcttcactacctggttcctatggagaacacgatggaagagaacagaattaccctctggcc
ataccagtggcctccatgagacaaggctctgaatacagaggaggtttaccacgagttaat
gtcctaagcagaagtccatatggaagtttcacggataatctttcttttgagcctgagcca
gaactggcatacaacccaccttctaccttccatagtccctatactcacagcacttccaat
agatcagaagatgactttatttggagacgtgacagaagaccacatgatgagatcttcatg
acttcttccagtgtgtttgaaacaaatccagtgtggaaagaagaggaaactttagttgga
aatcttgcaagtatgtccaccaatgaaaggattaaagcaatccagaagatgccagagacc
atgaaaaaaaagagagagatcaggaataaagttcttaaagaaataacaaaaaaatcaagg
caccgcagtactcacctttcctgctgtacacagtgtcttcagggaatagcagtgtcattt
cggcgatttggaaatagcttgtcagaatattttcacctactgcagttacggtacaacact
ctgaaggtcattggtgccgagtttggaacaagtgttctttcttattttattttcttgaag
tggctgctaactttcaacatcttctcactcctcataaacttcagtttcatcacaattcct
cagtttcttgcagcagaaccaaataacctttcattcacgggtctggagctgctcactgga
gctggttattttcaacaaacagtactctactatggcttttacaccaatgctacaatcagt
aaaataaagaatggtccatcttacaacatgcagctggcctatattttcactgttggactg
tattttgtcatctgttttcttatcttgttgttcagcatagcaaaatccttctggaggaac
ttcattaaccctcaggcatactctgtgaatgctagtaaacttctctgcacttgggatttc
aatatcactaatgaaaaagctgtgaagctgaaacaaaagaatctcagcatgcaaataaag
gaagacctcactgaagtaaactgggaagttctaagtgtttcagcaaaagagagagttgtt
tgcatttctattaattttgcttcttgggtcgcttctctgggaacagcactagctgcttgt
gctggtgtttacttcctctccactaataacctaaagctgtttgtgaaagggcatagaaat
gacctagagagccaagctgccatgttggtgctacctgttgtcacatctctcctcaatgca
ttcatcccattcttctactcgtggcttggacgcctggagagatttaagactcctggacag
catatatatgtcactattaccagaaatatcatcctgaaaatatcaattcttggaatactg
tgctactactggcttggcattgtagctgcatcagagtcacagtgctgggaaactctggtg
ggccaagatatctatcgtcttattgtagttgacttcatattttgtttgcttggctctttc
tttggagagtttttacgaagaattattggaactacagtctatgtgagcctggggctgcca
gaatttgatattgggcgaaatgttttagatttgatctatgcacagactttgacctgggtc
ggtatcctcttctcacctctgctgcctgttatccagataatagcattttctatagtattt
tatgtgaaaaaggtcagtctgatgatgaattgccaaccccctcgcaaagtctggagaact
gctcaaatgacaacatccttcatattcctgctatttttcccttccttcgttggagtcctg
gctgtcattggagtcactgtctggaggttaaaaccttcagaagaatgtggtcctttccga
ggtttgtcttctatgtatgctgcagtctccgagtggatagaaatactggaaaattacact
gcctcaaaatgggtagtgtggatctaccataacttaattacaagtgaacttttcttcttc
atcctatccactcttgtcctaattgttacttatatttactggcaaataatagaaggaaga
aagaccatgaccaaactcttatataagcaaattagtaatgaaggaaaagataaaatgttt
ttacttgaacaactacggtcactgcaaagggcaaagcaaaccccatctgcgccaggagga
caaggccaagcaggtcaaagctcttcataccacccatccaggcagcctgcccagcaagtg
ccagactacccagggagggcatttgacagaaatcaaaatgcatcctacaacaacgagtat
cccgatgctgctgggatcttgagggggactggcttcccaccagggctggagagagcccag
cgcagcagcgggcctggcatgtcggaggcagtggcgatcgctctgcgggccagagaagca
gctgagttggaagaccaatatgacgacacctatcctcaaccatga
DBGET
integrated database retrieval system
