Strigops habroptila (Kakapo): 115606804
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Entry
115606804 CDS
T08851
Symbol
SMURF1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04120
Ubiquitin mediated proteolysis
shab04137
Mitophagy - animal
shab04144
Endocytosis
shab04340
Hedgehog signaling pathway
shab04350
TGF-beta signaling pathway
shab04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115606804 (SMURF1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
115606804 (SMURF1)
04350 TGF-beta signaling pathway
115606804 (SMURF1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115606804 (SMURF1)
04137 Mitophagy - animal
115606804 (SMURF1)
09144 Cellular community - eukaryotes
04520 Adherens junction
115606804 (SMURF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115606804 (SMURF1)
04121 Ubiquitin system [BR:
shab04121
]
115606804 (SMURF1)
03029 Mitochondrial biogenesis [BR:
shab03029
]
115606804 (SMURF1)
Enzymes [BR:
shab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
115606804 (SMURF1)
Membrane trafficking [BR:
shab04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
115606804 (SMURF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
115606804 (SMURF1)
Ubiquitin system [BR:
shab04121
]
Ubiquitin ligases (E3)
HECT type E3
115606804 (SMURF1)
Mitochondrial biogenesis [BR:
shab03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
115606804 (SMURF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
115606804
NCBI-ProteinID:
XP_030339160
LinkDB
All DBs
Position
4:complement(82678409..82725674)
Genome browser
AA seq
766 aa
AA seq
DB search
MVVHKKDRGLQPKSTGAGQTAAAQPNLGIWDLIPSRFQAMGNTVGSGILCAKNLAKKDFF
RLPDPFAKVVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTDSITISVWNHKKIHKKQG
AGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPTDTDAVRGQIVVSLQTRDRIGTGGSVVD
CRGLLENEGFPIFRTVYEDSGPGRPLSCFMEEPAPYTDTTGAAGGGNCRFAESPSQDQRL
QAQRLRTPEVRGHVQTPQNRPHGHQSPDLPEGYEQRTTVQGQVYFLHTQTGVSTWHDPRI
PRDLNSVNCDELGPLPPGWEVRSTVSGRIYFVDHNNRTTQFTDPRLHHIMNHQCQLKEPS
QQPLTAPNEGSLEDGEELPAQRYERDLVQKLKVLRHELSLQQPQAGHCRIEVSREEIFEE
SYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIY
MLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESV
DPELHKSLVWILENDITPVLDHTFCVEHNAFGRILQHELKPNGRNIPVTEENKKEYVRLY
VNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQKELELIIGGLDKIDLNDWKSNTRLKH
CMADSNIVKWFWQAVETFDEERRARLLQFVTGSTRVPLQGFKALQGSTGAAGPRLFTIHL
IDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEETCGFAVE
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggttgtacataagaaggaccgtgggttacagcctaagagcactggtgcaggacaaacg
gcggctgctcagcccaaccttggcatctgggacttgataccgagccggtttcaggcaatg
gggaacacggtgggaagtggcatattatgtgccaagaatcttgcaaagaaagatttcttc
agacttcctgacccatttgcaaaagtagttgtcgatgggtcaggtcagtgccattcaact
gacactgtgaagaacacattggaccccaaatggaaccagcattacgatctgtatgttggg
aagacagattccataaccatcagtgtatggaaccataaaaaaatccacaagaaacaggga
gctggcttcctggggtgtgtccgactcctctccaatgccatcagcaggctaaaagatact
ggataccagcgtttggatctatgcaaactaaatcccacagataccgatgctgtacgaggc
caaatagtggtcagtttacagacgcgggacagaataggcacaggaggctctgtagtagac
tgtagagggcttttggagaatgaaggtttccccattttcagaacggtttatgaagattcc
ggaccgggaaggccgctgagctgtttcatggaggaaccagcaccatatacagacactact
ggggctgctggaggaggcaactgtcgctttgcagagtcccccagtcaagatcagaggctt
caggcacagcgacttcgcactcctgaagtcagaggtcatgtacagacacctcagaacaga
ccacacgggcaccagtcgcctgacctacccgaaggctacgaacaaagaacaacggtacag
ggccaggtttattttttgcacacacagactggagttagcacatggcatgacccaaggata
ccaagagaccttaacagtgtgaattgtgatgaactgggacctttgcctccaggttgggaa
gttagaagtacggtttcaggaagaatatattttgtagatcataacaacagaaccacacaa
ttcacagatccacgactacatcacatcatgaaccatcaatgccagctaaaagagcccagc
cagcagcctctgacagctccaaatgagggatcactagaagatggtgaggagctgcctgca
cagagatatgaaagagacttggtacagaagttgaaagttcttagacatgagctctccctt
cagcaaccacaagctggtcactgtcgcatcgaagtatccagagaggaaatatttgaggaa
tcctaccgtcagataatgaagatgaggccaaaggacttgaaaaagaggcttatggtgaaa
ttccgaggagaggaaggcctggattatggaggagtagcaagagaatggttgtatttacta
tgccatgaaatgttgaatccttattatggacttttccagtactccacagataatatttac
atgctgcaaatcaatccagactcttctatcaatcctgaccatttgtcttatttccatttt
gttggtcggataatgggattggctgtgttccatggacactatatcaacggggggttcacg
gttcccttctacaaacagcttctggggaagcccattcagctctctgatctggaatctgtt
gacccagaattacacaaaagtttagtctggatcttagagaacgatatcaccccagttctg
gaccatacattttgtgtggaacacaacgcttttgggcggattttacagcatgaactcaaa
ccaaatggcaggaatattccagtgacagaagagaacaagaaagaatatgtcaggttgtat
gtaaattggagatttatgagaggaatagaggcacagttcctggctctgcagaagggtttt
aatgaacttattcctcaacatctccttaagccttttgaccagaaggaacttgagctaatc
ataggaggcctggataagatagacctgaatgactggaagtcaaacacacgtctaaagcac
tgcatggcagatagcaatattgtgaagtggttctggcaagcagtggaaacatttgatgaa
gaaagaagggcaaggctgctgcagtttgtgacgggttcgacgcgtgtcccacttcaaggt
ttcaaggctttacaaggttctacaggcgctgcaggacccagactgtttaccatccattta
atagatgcaaacacagacaacctgccaaaagcccacacttgctttaaccggattgacatt
ccgccttatgagtcatacgagaagctttatgagaagctgttgacagctgtggaagagaca
tgtgggtttgctgtggagtga
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