Strigops habroptila (Kakapo): 115606840
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Entry
115606840 CDS
T08851
Name
(RefSeq) serine/arginine-rich splicing factor 5-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03040
Spliceosome
shab05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115606840
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115606840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shab03041
]
115606840
Spliceosome [BR:
shab03041
]
Common components
Common spliceosomal components
SR proteins
115606840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
SET_assoc
OB_RNB
Motif
Other DBs
NCBI-GeneID:
115606840
NCBI-ProteinID:
XP_030339234
UniProt:
A0A672V6Z5
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All DBs
Position
4:complement(47333510..47350099)
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AA seq
277 aa
AA seq
DB search
MSGCRVFVGHLSSRARERDVEKFFKGYGRIREIHLKNGFGFVEFEDHRDADDAIYELNGK
ELCDERVTIEHARARRGRGRFPQRFSYYQSQSGSSRYGPPVRTEHRIIVENLSSRISWQD
LKDVMRKAGEVTYVDAHRNNRNEGVVEFASYSDMKSALEKLDGTELNGRRIKLTEDHRRH
RSRSRSRSYSRSRSRSRSTGSSRSDSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTPK
KSYSQKSHRSSLLASSPSPSASKRKSRSRSSSAHSRS
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctgccgtgtctttgttggacacttaagctcacgtgctcgggaacgggatgtg
gagaaattcttcaaaggatatggacgcataagagaaatccatctaaaaaatggatttgga
tttgtggaattcgaagaccacagggatgctgatgatgcaatttatgaacttaatggtaaa
gagctgtgtgatgaaagggttacaattgagcatgctcgagcccgaagagggaggggcaga
ttcccacaacggttcagttattaccagtcgcagagtggatctagccggtatggacctcct
gttcgtactgaacacaggatcatagttgaaaacctttcatcccgtatcagctggcaggac
ttgaaagatgtcatgagaaaggcaggggaggtcacctatgtggatgctcacagaaacaac
aggaatgaaggggttgtggaatttgcatcttacagtgatatgaagagtgcactggaaaaa
ctggatggcactgagctgaatggacgcaggattaaattgactgaagatcacagaaggcat
agaagcagatcacgatcaaggagttactcaagatctcgcagcaggtccaggtctacagga
tcttctagatcagacagccggtccaggtccaggtcgagatcaaggtccaggtccaggtct
cgctctcgatcccggtcccgatctcgatcccggtctcgttctcgcagtcgtacacctaaa
aagagctactcccagaaaagccaccgctccagcttgctagcttcttccccatctccctct
gcttctaagagaaaatctcgttctaggtcgagctctgctcatagccgtagttaa
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