Strigops habroptila (Kakapo): 115606846
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Entry
115606846 CDS
T08851
Symbol
PSEN1
Name
(RefSeq) presenilin-1 isoform X1
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04310
Wnt signaling pathway
shab04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
115606846 (PSEN1)
04330 Notch signaling pathway
115606846 (PSEN1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shab01002
]
115606846 (PSEN1)
Peptidases and inhibitors [BR:
shab01002
]
Aspartic peptidases
Family A22: presenilin family
115606846 (PSEN1)
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Gene cluster
GFIT
Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
115606846
NCBI-ProteinID:
XP_030339253
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Position
4:16638138..16664375
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AA seq
480 aa
AA seq
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MTELSAHLPQFQHGQLTENFPDNHLSNTQESMASALFNTDQNDSCERRRHDNSERRRNDN
PDSETNGQPQNIQQVVEHDEDEDEELTLKYGAKHVIMLFVPVTLCMVVVVATIKSVSFYT
RKDGQLIYTPFTEETETVGQRALNSILNAAIMISVIIVMTILLVVLYKYRCYKVIHGWLI
ISSLLLLFFFSFIYLGEVFKTYNVAMDYITVALMIWNFGVVGMICIHWKGPLRLQQAYLI
MISALMALVFIKYLPEWTAWLILAVISVYDLVAVLCPKGPLRMLVETAQERNETLFPALI
YSSTMIWLVNMAEEDPEAQRKASKNSAYDKQAPANQARNEDAEADDGGFSQEWQQQRDNR
IGPIESTPESRAAVQALPSNSQTSEDPEERGVKLGLGDFIFYSVLVGKASATASGDWNTT
LACFVAILIGLCLTLLLLAIFKKALPALPISITFGLVFYFATDNLVQPFMDQLAFHQFYI
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgacagaactatctgcgcatttaccccagtttcagcatgggcagctgacagaaaacttc
cctgataaccacctcagcaacactcaagagtccatggcttctgctctgtttaatactgat
cagaatgacagttgcgagagacgtcgccatgataatagtgagcgcagaagaaatgacaat
cctgactctgagaccaatgggcagccacaaaacattcagcaagtggtggaacacgatgaa
gacgaagatgaggagctgacactgaaatatggcgcaaaacatgtgattatgttgtttgta
cctgtcacactttgcatggtggtcgtcgtcgcaaccatcaagtctgtcagcttttacaca
cgcaaggatggacagctcatctacactcctttcacagaagagacagagacagtaggacag
agagccctgaattcaattctcaacgcggctatcatgatcagcgttatcattgtcatgacc
atactcctggttgtgctttacaaatacaggtgctacaaggtgatccatggctggcttatc
atttcttctcttttgctgcttttctttttctcattcatctacctgggtgaggtttttaag
acatataacgttgccatggactacattacggtggcactcatgatctggaacttcggtgtt
gtgggcatgatttgtattcattggaagggtcccctccggctccagcaggcatatctcatt
atgataagtgctctcatggccttggtgttcattaagtaccttcctgaatggactgcatgg
cttatcctggctgtcatttcagtgtatgatttggttgctgtcctatgtcctaaaggtcct
cttcgcatgctagttgaaaccgctcaagagagaaatgaaactctattcccagcacttatt
tactcctcaacaatgatatggctggtgaacatggctgaggaagatccagaagcccaacgg
aaagcttccaaaaactctgcttatgataaacaagctcctgcaaaccaggctcggaatgaa
gatgctgaagcagatgatggtggatttagtcaggaatggcagcaacaaagggacaataga
ataggacccattgaatcaacacctgaatctcgtgctgctgttcaggctctacctagtaac
tctcaaacaagtgaagaccctgaagaacgaggagtaaagctaggtttaggagacttcatt
ttctacagtgttcttgttggcaaagcctccgcaacagcaagcggtgactggaatacaaca
ttagcatgttttgtagccatattaattggtctgtgccttacacttctgcttcttgccatc
tttaagaaggccttaccagctcttccaatctccataacctttgggctagttttttacttt
gctacagataacttggtgcagccttttatggaccagctagcattccatcagttttatatc
tag
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