Strigops habroptila (Kakapo): 115606863
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Entry
115606863 CDS
T08851
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03022
Basal transcription factors
shab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115606863 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
115606863 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shab03021
]
115606863 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
shab03400
]
115606863 (GTF2H1)
Transcription machinery [BR:
shab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
115606863 (GTF2H1)
DNA repair and recombination proteins [BR:
shab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
115606863 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
DUF4533
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
115606863
NCBI-ProteinID:
XP_030339297
UniProt:
A0A672TSL0
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Position
4:complement(52593573..52618851)
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AA seq
554 aa
AA seq
DB search
MLQLLIATMATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTVSHMYADIKC
QKISPEGKAKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELE
EKNRMLQEDPVLFQLYKDLVVSQVISAEEFWANRLSMNAGDNSAAPSKQDVGISAAFLAD
VRPQTDGCNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRD
RLNTGSKDLFAECAKLDEKGLKAMVSQGVKNPLIDLTALDDYTLDEEYVASMASTSNASK
SARESSTTAIIKRFNHHSAMVLAAGLRKQEAQNDHYSETSSTDGNSRDSDFFQPPIKKVK
LQEAIEYEDLSKNNSIKTIALNLKSDRYYHGPTPIQSQQYATSQDIINSFNSIRQEMEAY
VPKLTQVLSSADAASTIAALSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRH
FWSCFPVNTPFLEEKVVKMKSNLERFQVTKLCPFQDKIRRQYLSTNLVSHIEEMLQTAYN
KFHTWQSRRMLKKT
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgttacagctccttatagccacaatggcaacgtcatctgaagaagtgttactgattgta
aagaaggtacgtcagaagaagcaggatggagctctctaccttatggctgaaaggatagca
tgggcacctgaaggcaaagaccgattcacagtcagccatatgtatgcagacataaaatgc
cagaaaatcagtccagaaggtaaagctaaaattcagcttcagctagtgttgcatgcaggg
gacacaaccaactttcacttctccaatgaaagcacagcagtgaaggaacgagatgcggta
aaggatcttcttcaacaactgttgcccaagttcaaaaggaaagctaataaagaacttgag
gagaagaacagaatgctgcaagaagatcctgttttgtttcagctctataaagaccttgtt
gtgagccaagtaatcagtgctgaagaattctgggccaaccgtttaagcatgaatgcaggg
gataattctgcagcacctagtaagcaggatgtgggcatctctgcagcatttctggctgat
gtacggcctcaaacagatggctgcaatggtctgaggtataatttgacttcagatatcatt
gaatccatatttcgaacatatcctgcagtaaaaatgaaatatgcagaaaatgttccacat
aacatgactgaaaaggaattctggacacgattttttcagtctcattatttccatcgggac
aggctcaatacaggctcaaaagacctctttgccgagtgtgccaaactggatgaaaaaggg
ttaaaagcaatggtgtctcaaggagtaaaaaaccccctgatagatttaacagctttggat
gattacacattagatgaagaatatgttgcttctatggcctctacatcaaatgcctcaaaa
tctgctagagaaagtagcaccactgccattataaaacgctttaatcatcatagtgccatg
gtccttgcagctggcctcaggaaacaagaagcacaaaatgaccattacagtgagaccagc
agtacggatggaaactccagggattcagatttctttcagccaccaattaaaaaggtgaaa
ctgcaggaggccattgaatatgaagatttatcaaagaataatagcattaaaactattgca
ctaaacttgaagtctgataggtattatcatggtccaactccaattcaatcgcagcaatat
gcaaccagtcaggatataattaattcttttaatagtattaggcaagaaatggaagcatat
gtacccaaactaactcaggtcctttcaagtgctgatgctgctagcactattgcagccctg
tcacctggaggagcacttatgcagggtggaacacagcaagccataaaccagatggtgcca
aatgacattcagtctgaactaaaacacttgtatgtggcagtaggggaactgctacgacac
ttctggtcctgctttcctgttaacacgccattcctagaagaaaaggttgtgaaaatgaag
agcaacttggaaagatttcaggttacaaagctctgcccattccaagacaagattcggaga
cagtatttaagcacaaatttggtaagtcatatagaagagatgctgcagacggcctacaat
aagttccatacgtggcagtcccggcgtatgctgaagaagacgtga
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