Strigops habroptila (Kakapo): 115606911
Help
Entry
115606911 CDS
T08851
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shab03009
]
115606911 (IGHMBP2)
03012 Translation factors [BR:
shab03012
]
115606911 (IGHMBP2)
Enzymes [BR:
shab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
115606911 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
115606911 (IGHMBP2)
Ribosome biogenesis [BR:
shab03009
]
Eukaryotic type
Other ribosome biogenesis factors
115606911 (IGHMBP2)
Translation factors [BR:
shab03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
115606911 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
AAA_30
R3H
AAA_19
Viral_helicase1
Helicase_RecD
zf-AN1
ResIII
AAA_16
Flavi_DEAD
nSTAND3
AAA_22
DEAD
SLFN-g3_helicase
UvrD-helicase
AAA_25
AAA
IstB_IS21
T2SSE
UvrD_C_2
ABC_tran
DAP3
PhoH
Herpes_ori_bp
Motif
Other DBs
NCBI-GeneID:
115606911
NCBI-ProteinID:
XP_030339399
LinkDB
All DBs
Position
4:complement(446196..478779)
Genome browser
AA seq
977 aa
AA seq
DB search
MAAEAAERHLELLREEREAELAQSRAWQESVPLKELQRRGVCLLKLHAASQRTGLYGRLL
VTFQPRKHDPDAELPSNSFGPGDIAGLYDAASQGDALCTGIVTRVTSRAVTVAFEDSQNT
LSLDHERSYRLLKLANDVTYNRLKKALNALKQYRGGPASDLIDVLFFSAEPRAFSETKPL
QLYNNSLDASQREAVSFSLAQRELAIVHGPPGTGKTTTLVEIILQAVQQGLKVLCCAPSN
VAVDNLVERLAGHSVRILRLGHPARLLEPIQRHCLDAVLARGDAAQIVADIRKDIDQACA
KTKKAQDKGERSHFLSEIKTLRKELKEREETAMAAALTHASVVLATNTGASSEGPLKLLP
DNHFDLVVIDECAQALEASCWIPLLKAPKCILAGDHKQLPPTIISHKAAAKGLALSLMER
LIGRYGQKVVKMLMVQYRMHEAIMHWASSELYGGRLTAHPTVAQHLLKDLPGVTSTEETT
TPLLLIDTAGCGLFELEVEDEQSKGNPGEVQLAGLHIQALVEAGVKAKDIAVVAPYNLQV
DMLREHLGHSYPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEERRLNVAVTRAR
RHVAIVCDTRTVGSQPFLQRLLAHLGQRGRVRSAFEYLSDLVPQSYPQEGQSERQRGAKL
PAAPGPKPQPPPGGKHRAAAARAACPKPGAQRSGAPPATSGPGRESPETKSGAERLRAML
MAFLESSEVQLDFPPSLNAHDRMLVHQMAEELGLQHGSTGEGRERYISVRRKEPTEPALP
AAASPSEQHPLPQPQHPSSETPAPAEPAGSSQGSGKVDLKALHLERVQREKARREEAARK
AQEPKAGGRKKDKGEAKGKPAEAEEDIDALISAAIKADNTCGFLRCKASVTTLGQLCHHC
HRRFCLSHHIPEVHGCGDKAKAQARQRISREGVLYPGSGSKDNSLDPAKRADLQRRLDKK
LSELTSQRKSKKRDKEK
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaggcagcggagcggcacctggagctgctgcgggaggagcgggaggcagag
ctggcccagagcagggcatggcaggaaagtgtccccctgaaggagctgcagcgcaggggt
gtctgcctgctgaaactccacgctgccagccagagaactggcctctacgggcgcctgctt
gtgaccttccagcctaggaaacatgacccagatgctgagctgccctctaacagctttggg
cccggagacatcgctggcctgtacgatgcagccagccagggtgacgcgctctgcacgggc
atcgtgacacgtgtcacctccagggcagtgacagtcgcctttgaggactctcagaacaca
ctgagcctggaccatgagcgctcctaccgcctgctcaagctggccaatgatgtcacctac
aacaggcttaaaaaagctttaaatgcactgaagcagtatcgggggggtccagcctctgac
ctcatcgacgtcctcttcttttctgctgagccaagagcattcagtgaaacaaagcctctg
cagctttacaacaactcactggatgcatcgcagagggaggctgtctccttctcactggca
cagagggaacttgccatcgtccatggaccacctggtacagggaagaccacaacgctggta
gagatcatcctgcaggcagtacagcaaggcctgaaagtcctgtgctgtgccccctccaac
gttgcagtggataacctggtggagaggctggcggggcacagcgtgcgcatcctgcggctg
gggcaccccgctcgcctgctggagcccatccagcgccactgcctggatgcggtcctggct
cggggtgacgctgcccagatcgtggcagatatcaggaaggacatcgaccaggcctgtgct
aaaaccaagaaggctcaagacaagggggagcggagccactttctcagtgagatcaagacc
ctgagaaaggagctgaaggagcgagaagaaactgccatggctgcagccctcacccacgcc
agtgttgtccttgctaccaatacaggtgcttcctctgagggccccctgaagctgcttcct
gacaaccactttgacctcgtggtgatagacgagtgtgctcaggcgctggaagccagctgc
tggatacctctgctgaaggctcccaagtgcatcctggctggggaccacaaacagcttcct
cccaccatcatctcccacaaagctgctgccaagggccttgccctcagcctgatggagcgg
ctcatcgggaggtacgggcagaaggtggtgaagatgctgatggtgcagtaccgcatgcac
gaggccatcatgcactgggcttcctccgagctctacggcggccgcctcactgcgcacccc
accgtagcccagcacttgcttaaggacctgccgggtgtcacctccacagaggagaccacg
actcccttactgcttatagacactgctggctgtggcctgtttgagctggaagtggaagac
gaacagtccaagggcaacccaggggaggtgcagctggctggtttgcacatccaagccctg
gtggaagccggtgtgaaggcaaaagacatcgctgtggtagccccctacaacctgcaggtg
gacatgctgagagagcaccttggccacagctacccagagctagaaatcaaatcagtcgat
ggtttccagggaagagagaaagaggcagtgatcctgtcattcgtgagatccaacaggaaa
ggtgaggtgggtttcctggcggaggagcggcggctcaacgtggcggtgacgcgcgcccgg
cgccacgtggccatcgtctgcgacacgcgcacggtgggcagccagcccttcctgcagcgc
ctgctggcccacctcggccagcgcgggcgcgtgcgctcggccttcgagtacctcagcgac
ctcgtgccccagagctacccgcaggaggggcagagcgagcggcagcggggggcaaagctg
cccgcagcccccggccccaagccccagccgcccccgggggggaagcacagggcagcagca
gccagagcagcgtgtccaaagccgggagcacaacgcagcggggcccccccggccacaagc
ggacctgggagggagagcccggagacaaaaagtggtgctgagaggctgagggccatgctg
atggccttcctggagagcagtgaggtgcagctggatttccccccatccctcaatgcccac
gatcggatgctggttcaccagatggccgaggagctggggctgcagcacgggagcaccggg
gagggcagggagcggtacatcagtgtccgcaggaaagagcccaccgagcctgcactgcct
gcagccgcctcccccagcgagcagcatccccttcctcagccacagcaccccagcagcgaa
acccctgcccctgctgagccagcagggagcagccagggctcggggaaggtggacctgaaa
gccctgcacctcgagagggttcagagggagaaagccagacgggaggaggcagcaaggaag
gctcaggagcccaaggccggcggcaggaagaaagacaaaggtgaagccaaaggcaagcca
gcggaggcagaagaagacatcgacgccctgatttctgctgccatcaaagctgacaacacg
tgcggcttcctccgctgcaaagccagtgtcaccaccctgggccagctctgccaccactgc
caccgccgcttctgcctcagccaccacatcccggaggttcatggctgtggggacaaggcc
aaggcgcaggcgcggcagcgcatcagcagggaaggggtcctgtatcccgggagcggctcc
aaagacaattccctggacccggccaagagagccgatctccagcggcgcctggacaagaag
ctcagcgagctcaccagccagaggaagagcaagaagagagacaaggagaagtga
DBGET
integrated database retrieval system
