Strigops habroptila (Kakapo): 115607107
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Entry
115607107 CDS
T08851
Symbol
SSRP1
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shab03000
]
115607107 (SSRP1)
03036 Chromosome and associated proteins [BR:
shab03036
]
115607107 (SSRP1)
Transcription factors [BR:
shab03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
115607107 (SSRP1)
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
115607107 (SSRP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
POB3_N
SSrecog
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
Motif
Other DBs
NCBI-GeneID:
115607107
NCBI-ProteinID:
XP_030339789
UniProt:
A0A672TLU8
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Position
4:165947..173176
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AA seq
706 aa
AA seq
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MADTLEFNEIYQEVKGSMNDGRLRLSRQGVIFKNSKTGKVDNIQASELAEGVWRRVALGH
GLKLLTKNGHVYKYDGFRESEFDKLSDFFKAHYCLELAEKDLCVKGWNWGTVRFGGQLLS
FDIGEQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKEGMKQSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDGSGEETDE
SFNPGEEDDDVAEEFDSNASATSSSGDGDSDRDDKKPAKKAKVVKERKARRKHPESKKGK
DPNAPKRPMSAYMLWLNASRERIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRKAED
ARRDYEKAMKEYSVGSKAESSRAERSKKKKKKQEKQPKGKAERKGATSKSVSSSKSSAKS
SNESFKSKEFVSSDESSSAESKKEDSEEEGAPSPRRSSSDSASGSD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacgctggagttcaacgagatctaccaggaggtgaagggctccatgaacgac
gggcggctgcggctgagccgccagggcgtcatcttcaagaacagcaagacggggaaggtg
gacaacatccaggcctcggagctggccgagggcgtgtggcggcgcgtggcgctgggccac
ggcctcaagctgctcaccaagaacggccacgtctacaagtacgacgggttccgggagtcg
gaattcgataagctctcggatttcttcaaggcccactactgcctggagctggccgagaag
gacctgtgcgtgaagggctggaactggggcacggtgaggttcggagggcagctcctgtcc
ttcgacatcggggagcagccggtgttcgagatcccgctgagcaacgtgtcccagtgcacc
acgggcaagaacgaggtgacgctggagttccaccagaacgatgacgccgaggtctcgctc
atggaggttcgcttctatgtgccgccgacccaggaggacggcgtggacccggtggaggcc
ttcgcccagaacgtgctgtccaaggcggacgtgatccaggccacgggcgacgccatctgc
atcttccgggagctgcagtgcctgacgccgcgcgggcgctacgacatccgcatctacccc
accttcctgcacctgcacggcaagaccttcgactacaagatcccctacaccacggtgctg
cgcctcttcctgctcccgcacaaggaccagcggcagatgttctttgtgatcagcctggac
cccccgataaagcaaggccagacccgctaccacttccttatcctgctcttctccaaggac
gaggacatctccctgaccctcaacatgaacgaggaggaggtggagaagcgcttcgagggg
cggctcaccaagaacatgtcgggctccctctacgagatggtcagcagggtcatgaaggcg
ctggtcaaccgcaagatcaccgtgcccgggaacttccaggggcactcgggcgcgcagtgc
atcacgtgctcgtacaaggcgagctcggggctgctgtacccgctggagcgcgggttcatc
tacgtgcacaagccgcccgtgcacatccgcttcgacgagatcagcttcgtcaacttcgcc
cgcggcaccaccaccacccgctccttcgacttcgagatcgagaccaagcagggcacgcag
tacaccttcagcagcatcgagagggaggagtacgggaagctcttcgacttcgtcaatgcc
aagaagctgaacatcaagaaccgcggcctgaaggagggcatgaagcagagctatgatgaa
tacgccgactcggatgaggaccagcacgatgcctacttggagaggatgaaggaggagggc
aagatccgggaggagaacgccaacgacagcagcgacggctctggggaggagacggacgag
tccttcaaccccggagaagaggatgatgatgtggctgaagagttcgacagcaacgcctcg
gccacgtcctccagcggcgacggcgacagcgaccgcgacgacaagaaaccggccaagaaa
gccaaggtggtgaaggagcgcaaggcccgcaggaagcacccggagagcaagaaggggaag
gacccgaacgcgccgaagcggccgatgtcggcgtacatgctgtggctgaacgccagccgc
gagcgcatcaagtccgaccatcccggcatcagcatcacagacctgtccaagaaggccggt
gagctctggaaagccatgtccaaggagaagaaagaggagtgggatcgcaaggcggaggac
gccaggagggactacgagaaggccatgaaggaatacagcgtgggcagcaaggccgagagc
tcccgggcggagaggtccaagaagaagaagaagaagcaggagaagcagccgaaggggaag
gcggagcggaaaggcgccacctccaagtctgtgtcctccagcaagtcctcggccaagagc
tcgaacgagagcttcaagagcaaagagttcgtgtccagcgacgagagctcctccgccgag
agcaagaaggaggactcggaggaggagggtgcccccagcccccgccgcagctcctcggac
tccgcgtcaggctccgattga
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