Strigops habroptila (Kakapo): 115607159
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Entry
115607159 CDS
T08851
Symbol
PRDM11
Name
(RefSeq) PR domain-containing protein 11 isoform X1
KO
K24644
PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shab03000
]
115607159 (PRDM11)
Transcription factors [BR:
shab03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
115607159 (PRDM11)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
SET
Dimer_Tnp_hAT
Zn_ribbon_PRDM4
FOG1-like_PR
DUF7822
DUF4954
Motif
Other DBs
NCBI-GeneID:
115607159
NCBI-ProteinID:
XP_030339926
UniProt:
A0A672TP95
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Position
4:4629459..4678992
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AA seq
1184 aa
AA seq
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MSENLKDCLIQTQASLGEMVTIKTEACSPRRDQEYGQPCSGRPDPQSMEVEPKKLKGKRD
LIMTKSFQQVDFWFCESCQEYFVDECPNHGPPVFVSDTPVPVGIPDRAALTIPPGMEVVK
EPNGENDVRCMNEVIPKGHIFGPYEGQMSSQDKSAGFFSWLIVDKNNRYKSIDGTDETKA
NWMRYVIISREEREQNLMAFQHSERIYFRACRDIRPGEKLRVWYSEDYMKRLHCMSQETI
NRNLTSGDKRLQREKSEKNVENQEDARGPLQLTTLKQGKSPYKRSCDEGESHPQTKKKKI
DLIFKDVLEASLESAKFEENQLATSTPLAIRKASKYQAEDIFERCGSAMQHGSLGLSRNR
SEGEWKVPHGSSFSSTKEVGILEDEEEEPLSLKADSPTELSLASAQGNSHEIPTTSFCPN
CIRLKKKIRELQAELDMLRSGKLPEPPVLPPQVPELQEFSDPTASESIISVPTIMEDDDQ
EVDSADESVSNDMIAATDEPSKMSSATGRRIRRFKQEWLKKFWFLRYSPTLNEMWCHVCR
QYTVQSSRTSAFIIGSKQFKIHTIKLHSQSNLHKKCLQLYKLRMHPEKTEEMCRNMTLLF
NTAYHLALEGRPYYDFRPLAELLRKCELKVVDQYMNEGDCQILIHHIARALREDLVERIR
QSPFLSIILDGQSDDLLADTVAVYVQYTSSDGPPATEFLSLQELGFSTTDSYLQALDRAF
SSLGIRLQDEKPTIGLGVDGANVTASLRANLFMTIRKTLPWLLCLPFMVHRPHLEILDAI
SGKELPCLEELENNLKQLLSFYRYSPRLMCELRVTAATLCEETEFLGDIRAVKWIIGEQN
VLNALIKDYLEVVAHLKDVSGQTQRADASAIALALLQFLMDYQSIKLIYFLLDVIAVLSR
LAYIFQGEYLLVSQVDDKIEEAIQEISRLADSPGEYLQEFEENFRESFNGIAVKNLRVAE
AKFQSIREKICQKTQVILAQRFDSRSRTFVKACQVFDLAAWPRSTDELMSYGKEDMVQIF
EHLETVPSFSREVCREGMDTRGSLLMEWRELKVDYYTKNGFKDLLSHICKYKQRFPLLNK
IVQILKVLPTSSACCEKGRAALQRVRKNNRSRLTLEQLSDLLTIAVNGPPIANFDCKRAL
DSWFEEKSGNSYALSAEMLSRMSSLDQKPMLQSMDHGSEFYPDI
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaacttgaaggactgtttgatccagacccaggcttccttaggggagatggtg
acgataaaaacagaggcctgctctccgcgccgggaccaagagtatggacagccttgctct
ggaaggcctgacccacagtccatggaggtggaacccaagaaactgaaagggaaacgggat
ttgatcatgaccaagagctttcagcaggtggatttctggttctgtgagtcctgccaggag
tactttgtggatgagtgcccaaaccacggccccccagtgttcgtgtctgacaccccagtg
cccgttggcatccctgaccgggcagcactgaccatcccacctggaatggaggtggtgaaa
gagcccaatggggagaacgacgtgcgctgtatgaacgaggtgatccccaaaggtcacatc
ttcgggccgtacgaggggcagatgtccagccaggacaagtctgcaggattcttctcgtgg
ctgatcgttgataagaacaaccgctacaaatccatcgatgggacagatgaaaccaaagca
aactggatgaggtacgtgatcatctcccgggaggagagggagcagaacctgatggccttc
cagcacagcgagaggatttacttccgtgcctgccgtgacatccgccctggggagaagctg
cgggtctggtacagtgaggattacatgaagcggttgcactgtatgtcccaggagaccatc
aacaggaatctcacaagcggagacaaaaggttacagagggaaaagtcggaaaagaatgtg
gagaaccaagaggatgcaagggggccgctccagctcaccaccttaaagcaagggaagagc
ccctacaagcgcagctgtgacgagggggaatcccacccccaaacaaagaagaaaaagatt
gacctcatcttcaaagacgtcctggaggcttctttggagtctgccaaattcgaagagaac
cagttagcaacgagtacaccgcttgccatcaggaaagcatctaaataccaggctgaagac
atctttgagcggtgtggcagtgccatgcagcatggctccctgggcctcagcagaaaccgg
agcgagggggaatggaaggtccctcatggttcctctttcagctccaccaaagaggtggga
atcctcgaagatgaggaagaagagcctttgtcactcaaagcagacagcccaacggagctg
tcgctggcctctgcacaaggcaactcccacgaaatccccaccacctccttctgccccaac
tgcatccggctgaagaagaagatccgggagctgcaggctgagttagacatgctgagatct
gggaagttacccgagccacccgtgttaccgccccaggtacccgagctccaagaattctca
gaccccacagcttcagaaagcatcatctctgttcccaccatcatggaggacgatgaccaa
gaggtagattctgctgatgaatccgtttccaatgacatgattgctgctacagatgagcct
tccaagatgtcttctgcgacaggccggaggatacggcggttcaagcaagagtggcttaaa
aagttctggtttctgcggtactccccgacactgaatgaaatgtggtgccacgtctgcagg
cagtacacagtgcaatcctctcggacttcagccttcatcattggctcaaagcagttcaag
atacacacaataaagcttcacagccagagcaacctccacaagaagtgcctgcagctttac
aagctcaggatgcacccggagaagacagaagagatgtgccggaacatgaccctgctcttc
aatacagcctaccacttggccctggagggcaggccctactatgactttcggcctctggca
gaactgctgaggaagtgtgagcttaaggtggtggatcaatacatgaacgagggagactgc
cagatcttaatccaccacatcgcccgggctcttcgagaggacctggttgaacgcatccga
cagtcccccttcctcagcatcatcctggatgggcagagtgatgacctgcttgcagacacc
gtggcggtttatgtgcagtacacaagcagtgatgggcctccggcaacagaattcctgtct
cttcaggaactgggcttttctacaacagacagttacctccaagcattagacagggctttt
tccagcctgggaatacgactgcaggatgagaagccaactattggtttgggagttgatggt
gctaacgttaccgccagcctgagagccaacttgttcatgacaatcagaaagaccttgccc
tggcttctctgtctcccctttatggtacataggccacacttggaaattttggatgcaatc
agtgggaaggaactgccgtgcctggaggagctagaaaacaacttaaagcagctgctcagt
ttctatcgttactctccccgactcatgtgcgagttgagggtcactgcagccactctgtgt
gaggagaccgagttcttgggggacattcgagcagtgaagtggatcatcggggagcagaac
gtgctcaacgctctcatcaaggattaccttgaggttgtggcccatctcaaagatgtcagc
ggccagacccaaagggcggacgcttctgccattgccttggccctcctgcagtttctgatg
gactaccagtcgattaaactcatctacttcctgctggatgtgattgctgtgctttcacgt
ctcgcctacatcttccaaggggaataccttcttgtgtcgcaggtggatgataagatagag
gaggccatccaggagatcagccggcttgcagactcgcccggggagtacttgcaggagttt
gaggaaaacttccgtgaaagctttaatggcattgctgtgaaaaacctacgagtggctgaa
gccaaattccagtcgatccgagaaaagatctgccagaagacccaggtgatcctagcccag
aggtttgattcccgtagccggacatttgtgaaggcctgtcaggtatttgaccttgcagct
tggcccagaagcactgatgagctcatgagctatgggaaggaggatatggtacagatattt
gagcacttggagacggtcccatccttttccagagaggtttgcagagaggggatggacacc
cgcgggagtctgttgatggagtggcgagaactcaaggtggattattataccaaaaacggt
tttaaagacttgctcagtcacatttgtaaatacaaacagagattccccctcctcaataaa
atagttcagatcctcaaagtccttcccacctcatcggcctgctgtgagaaggggcgcgct
gccctgcagagagtgcgcaaaaacaaccggtcccggctcacgctggagcagctcagtgat
cttctgaccattgctgttaacgggccgcccattgccaactttgattgcaaaagggcacta
gatagttggttcgaggagaagtcgggcaatagctacgctctgtcagctgaaatgctgagc
aggatgtcgtcccttgatcagaagccgatgttgcagagcatggaccacggctctgagttt
taccccgatatttag
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