Strigops habroptila (Kakapo): 115607226
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Entry
115607226 CDS
T08851
Symbol
GRIN2A
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A isoform X1
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04020
Calcium signaling pathway
shab04080
Neuroactive ligand-receptor interaction
shab04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
115607226 (GRIN2A)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115607226 (GRIN2A)
04082 Neuroactive ligand signaling
115607226 (GRIN2A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shab04040
]
115607226 (GRIN2A)
Ion channels [BR:
shab04040
]
Ligand-gated channels
Glutamate (ionotropic)
115607226 (GRIN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
115607226
NCBI-ProteinID:
XP_030340101
UniProt:
A0A672TEH8
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All DBs
Position
4:71865012..72049752
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AA seq
1458 aa
AA seq
DB search
MRKIGCALLVLQALLAPLDLVRGAEKSYPVLNIAVILGRTKSITERDIRALWTREMSADL
TVDVNVVTLLVDQTDPKSIITHICDLMSGTKIHGVVFGDDTDQEAVAQILDFISSQTSIP
ILGIHGGASMIMADKDVMSTFFQFGASIQQEAIIMLKIMQDYDWHVFSLVTTTFPGYRDF
INVIKTTVENSFVGWDMQNVIILDTAFGDAKTQIQLKKIHSSVILLYCSKDEAVYILDEA
RSLGLTGYDFFWIVPSLVSGNTEITPKEFPSGLISASYDEWDYSLEARVRDGLGIIATAA
SAMLEKYSFIPEAKTSCYGQLEKNDRPSHTLHKFMMNVTWEGKDLSFTADGYQAHPRLVV
IVLNNDRQWEKVGKWENNSLSLKYSVWPRYSSFADSDPDDNHLNIVTLEEAPFVIVEDVD
PLMESCQKNTVPCRKFVKINNSTNEGTNVKKCCKGFCIDILKKLSKTVKFTYDLYLVTNG
KHGKKVNNVWNGMIGEVVYHRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRSNGT
VSPSAFLEPFSASVWVMMFVMLLIVSAMAVFIFEYFSPVGYNRNLAQGRDPHGPSFTIGK
AVWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVT
GLSDKKFQRPYDYSPPFRFGTVPNGSTERNIRNNYPDMHLYMTKYNQKGVEDALVSLKTG
KLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQIDLALLQFV
GDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMAGVFYMLAAAMALSLITFVWEHLFYW
KLRFCFTGVCSDRPGLLFSISRGIYSCIHGVHIEEKKKSPDFSLTNSQTNMLKLLRTAKN
MTNMNPSRINSPKRTADFIQRGSLIMDMVMDKGNLMFSDNRSFQTKDNFFGDNISELQTL
PGNRHKDNLNNYVFQGQHPLTLNESNPNTVEVAVTAEAKANSRPRQLWRKSVESLRQESV
RQSQGSQREDGSDENRQLSVKSQRYLPEEVIHSDVSETSSRATCHMEPENNNKHHKTKDN
FKKRTVASKYPKDCSEVELTYLKTKQSSPRDKIYTIDADKEPGFRLDTPQYIENIVLPET
IELPDVYQDHNDIYRKAELANRTPSHNEDSLPNNDQYKLYAKHYTLKDKNASLVDMNDRY
RQNSTHCRSCLSNLPTYAGHYSSRSPYKCDACLRMGNLYDIEEDQMLQDTTNLSLPEEIY
QHSWSQNNALQYHKKNKLRISRQHSFDNIADKSREIDFGRPSRSISLKEREKFLQSSPYA
SMFSVPSSKLLSNKASLLTHALEDSKRSKSLYPVHSDDNPFLHSYRDDQHLSLRRSPADL
YKHSLPTRGRNDNYLRSSIKSTASYCSRDGRIHNDMYIKEHVLPYVANRNSLYSTPRVLN
SCSNRRVCKKRPSLESDV
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaattggctgtgctctcctggtactccaagctcttctggcgcctttggatctt
gttcgtggagcggagaaaagttatcctgtcctgaacattgcagtgattctgggaaggacc
aagtctatcacagagagagatatcagagctctctggaccagggaaatgtcagcagacctg
actgttgatgtcaatgtggtgacccttctggtggaccagactgaccctaaaagcatcata
acacacatttgcgacttgatgtcaggcaccaagatccatggagtggtttttggagatgat
actgatcaggaggcagtagctcagattttggattttatttcatctcagacttctattcca
attcttggaattcatggcggggcatccatgataatggcagataaggatgtgatgtccacg
ttcttccagtttggggcttccatccagcaggaagccatcatcatgctgaagatcatgcag
gattatgactggcatgtgttctctctggtgaccaccaccttccctggatatcgagacttc
atcaatgttattaagaccacagtggaaaatagttttgtgggctgggacatgcagaatgtc
atcatactcgataccgcctttggagatgccaagacccaaattcagctgaagaaaattcat
tcatctgtcatcctgctatattgttccaaggatgaagctgtctacatactggatgaggct
cgttccctgggccttactggctatgatttcttttggatagttcccagcctggttagtggt
aacacagaaatcactcccaaggagtttccttcagggctcatttcagcatcttatgacgaa
tgggactacagtttagaagctcgggtacgggatggccttgggattattgccactgctgca
tcagccatgctggaaaaatactccttcattccggaagcaaaaaccagctgctatggacaa
ctggagaaaaatgaccggccatctcacaccttgcacaagtttatgatgaatgtgacttgg
gaaggtaaagatttgtccttcacagcagatggttatcaggcacaccccaggctggtggtg
atagtactcaacaatgatcgccagtgggaaaaggtggggaaatgggagaacaactccttg
agcctgaagtactctgtctggccaaggtacagctcttttgcagacagcgaccctgacgat
aaccatttgaatattgtcaccctggaggaggctccctttgtcattgttgaggatgtggat
cctttgatggaaagttgccagaaaaacactgtgccatgtcgtaaatttgtcaaaattaac
aactcaactaatgagggaactaatgtaaagaagtgctgcaaaggattctgcattgatatc
ttgaagaagttgtctaaaactgtcaagttcacctatgacctgtatctggtgactaatggg
aaacatggcaaaaaagtcaataatgtgtggaatggaatgattggtgaagtggtataccat
cgtgcagttatggctgtggggtctctcactattaatgaagagcgctctgaagtggttgac
ttttcagtgccatttgttgagactgggattagtgtcatggtgtcacggagcaatggcaca
gtttcaccatctgcttttctagagccttttagtgcttctgtgtgggtgatgatgtttgtt
atgcttctcattgtgtccgccatggctgtcttcatatttgagtactttagtcctgtagga
tataacaggaacttggcacaagggagagatccccacggaccatcctttaccattggaaag
gcagtgtggttactctggggcttggtattcaacaactctgtgcctgtgcaaaaccccaaa
gggacgacaagtaaaatcatggtgtcagtttgggctttctttgctgtcattttcctggct
agttacactgccaacttagctgcctttatgattcaagaggagtttgttgaccaagtgact
ggactgagtgataaaaagtttcaaaggccatatgattattcacctccttttcgatttgga
acagtcccaaatggaagcacagagaggaatatcagaaacaactaccctgatatgcatctt
tacatgacgaagtacaatcagaaaggagtggaagatgccttggtcagcttgaaaactggg
aagttggatgctttcatctatgatgcagcagtgctgaactacaaggctggaagagatgaa
ggctgcaaacttgtcacaatagggagtggatacatctttgccactacaggctatggaatt
gcccttcagaaaggatcaccttggaagagacaaattgatctagccctccttcagtttgtt
ggagatggggaaatggaagagttagaaaccctgtggctgactggtatctgccacaacgag
aagaacgaagtcatgagcagccagctggacatcgacaacatggcaggagtgttttacatg
cttgcagcagccatggcactcagtttaataacctttgtctgggagcacttattttactgg
aaacttagattctgcttcactggagtctgctcagataggccgggattgttgttctcaatc
agcaggggtatttacagctgcattcatggagtacacattgaagaaaagaagaagtctcct
gacttttctttgactaattcccaaaccaacatgttaaaactactgcgaacagcaaaaaat
atgaccaatatgaacccttcaagaattaactcccccaaaagaacagctgattttattcag
aggggttccttgattatggacatggtcatggataagggaaacttgatgttttctgataac
agatcctttcagacaaaggacaacttttttggtgacaacataagtgaactgcagacactt
cctggcaatcgacacaaggacaatcttaacaactatgttttccaaggtcagcatcctctc
acgctgaatgaatccaatccaaatacagtagaggttgcagtaacagcagaagcaaaagca
aactccagacctaggcagctttggaggaaatctgttgaatctttacgtcaagaatctgta
cgtcagagccaaggttcccagagagaagacgggtcagatgaaaacaggcagctttcagtg
aaaagccaaagatacctcccagaagaggtcatccattcagatgtatcagagacatcaagc
cgagctacttgccatatggaacctgaaaacaacaacaagcaccacaaaaccaaggacaat
tttaaaaagaggacagtagcatcaaaatacccaaaagactgtagtgaagtggaactgaca
tatctgaaaaccaaacagagctctccacgggataaaatctacacaattgatgctgacaag
gagccaggattccgcttggacacacctcagtacatcgaaaacattgtccttccagaaact
atagagcttcctgatgtttatcaagatcacaatgacatctacaggaaagcagaacttgct
aacaggactccctcgcataatgaagacagtcttccaaataatgaccagtataaactttat
gcaaagcactacactttaaaagataaaaatgcttccctagttgacatgaacgatagatac
aggcagaattccacccactgcaggagctgtctttccaatttgcccacttatgcaggacac
tattcgagcagatctccttataaatgtgacgcgtgcttgcggatggggaacctctatgat
attgaagaagatcagatgctgcaggatacaacaaacttatcacttcctgaagaaatatat
cagcatagttggtcacaaaacaatgccctgcaatatcataaaaaaaacaagctgaggatt
agcaggcaacattcttttgataatattgctgataagtccagggaaattgattttggaaga
ccttctcgtagtataagcttgaaagaaagagaaaaatttctacaaagtagtccatacgca
agcatgtttagtgttccctcaagcaaactgttgagcaacaaggcctcacttttaactcat
gctctggaggacagtaagcggagcaagtccctgtatcctgttcactcagatgataacccc
tttctgcactcgtatcgtgatgaccagcacttatctcttaggcgaagtccagctgatctt
tataaacattcattaccaacaagaggaagaaatgataattatttaaggtcatccataaaa
tctacagcatcttactgttccagggatggtcggatccataatgacatgtacattaaagag
catgttttgccttacgttgcaaataggaatagcttgtactcaactccaagggttttaaat
tcctgtagcaatagacgtgtgtgtaagaaaaggcctagccttgaatcagatgtttaa
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