Strigops habroptila (Kakapo): 115607355
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Entry
115607355 CDS
T08851
Symbol
SLC6A5
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2 isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
115607355 (SLC6A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shab02000
]
115607355 (SLC6A5)
Transporters [BR:
shab02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
115607355 (SLC6A5)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
115607355
NCBI-ProteinID:
XP_030340425
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Position
4:complement(64562358..64600069)
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AA seq
723 aa
AA seq
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MAGLPPPLSNDTKTLPSEEAKPNDFERTKVGVCKLSSTPVQANSTLRRGSVETFPCKHSP
GSGPAGQAAIPHCKIPALQSTDGDANLNLGKSALEQNNVKGAWVTLSQSTVVLGTDGNTS
VLPGRVEGEDDVGDENKARGNWSSKLDFILSMVGYAVGLGNVWRFPYLAFKNGGGAFLIP
YLMMLALAGIPIFFLEVSLGQFASQGPVSVWKAIPALQGCGIAMLIISVLIAIYYNIILC
YTLFYLFASFVPVLPWASCNNPWNTPDCKDKNKLLLDSCIIGDHPKIQIKNSTFCMSAYP
NLTMVNFTSEGNKTFVSGSEEYFKYFVLKISAGIEYPGEIRWPLALSLFLAWVIVYASLA
KGIKSSGKVVYFTATFPYVVLIILLIRGVTLPGAGAGIWYFITPKWEKLVDAMVWKDAAT
QIFFSLSAAWGGLITLSSYNKFHNNCYRDTLIVTCTNSATSIFAGFVIFSVIGFMANELK
VNIEAVADQGPGIAFVVYPEALTRLPLSPFWAVIFFLMLLTLGLDTMFATIETIVTSVSD
EFPKYLRTHKPLFTLGCCISFFIMGFPMITQGGMYMLQLVDTYAASYSLVIIAIFELVGV
SYIYGLQRFCDDIEMMIGFKPSKFWRVCWAFVTPTILTFILCFSFYQWEPMTYGVYHYPG
WSMVLGWLMLACSVIWIPVMFVIKMHLAPGKFIEYLLKKPSYNLCLTLYSYRVLPVLGTA
GDL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggctgggcttcccccaccgctctctaatgacaccaaaacacttccctccgaagaagct
aaaccaaatgattttgagaggaccaaagtcggggtctgcaagctcagcagcaccccagtg
caagccaattccaccctccggaggggatctgtggaaaccttcccatgcaaacacagcccc
gggtcagggcccgccgggcaagctgcgatccctcactgcaaaattcccgctttgcaaagc
accgacggggacgctaacctgaaccttggtaagagcgcactggagcaaaacaacgtcaag
ggcgcctgggtgaccttgagccagagtaccgtggtgctgggcacagatggcaacacttct
gttcttcctggcagagtggagggggaagacgatgtgggggatgaaaataaagcccgaggg
aactggtctagcaagctggatttcatcctctccatggtgggttatgcagtggggctgggc
aatgtctggaggttcccgtacctggcctttaagaatgggggaggtgcgttcctcatcccc
tacctgatgatgctggctctggccgggatccccattttcttcctggaggtctccctgggg
cagttcgccagccagggccccgtgtcggtgtggaaagccattcccgccctgcaaggctgt
ggcatcgcgatgctgatcatctcggtcctgatagccatatattacaacattatcctctgc
tacacgcttttctacctttttgcatccttcgtccccgtgctcccctgggcttcctgcaac
aatccctggaacacgccagactgtaaagataaaaacaaacttttgttagattcctgcatt
attggtgaccacccaaaaatacaaatcaagaactccactttctgtatgagtgcctatcca
aacctgactatggttaacttcaccagtgaaggcaacaaaaccttcgtcagtggaagtgaa
gaatatttcaagtactttgtactgaagatttcagcagggattgaatatcctggtgagatc
agatggcccttggcactatcacttttcctagcttgggtgattgtctatgcctcccttgct
aaaggaatcaagtcatcaggaaaagtggtgtactttacagctacattcccctatgtagtt
ctcataatccttcttataagaggagtaactctacctggagctggagctggaatctggtac
ttcatcacgccaaagtgggagaagctagttgatgctatggtttggaaggatgctgccact
cagattttcttctccttatctgcagcatggggaggcctcattactctctcttcttacaac
aaattccataataattgctacagggacacattgatagtcacatgcaccaacagtgccaca
agtatatttgcaggttttgtcatcttctcagttattggcttcatggcaaatgaactcaaa
gtgaatattgaagctgtggcagaccaaggtcctggaattgcttttgtggtttacccagaa
gccttaactaggcttcccctctcaccattctgggctgtaatattctttttgatgctactg
actcttggattggacactatgtttgccactatcgagactatagtgacctctgtttcggat
gagttccccaaatacttacgtacacacaagccactgttcactcttgggtgctgcatctcc
tttttcatcatgggatttcctatgatcactcagggtggaatgtatatgttacagcttgtg
gacacttatgcagcttcttattctcttgtcatcattgccatctttgagctggttggagtt
tcctatatatatggattgcaaagattttgtgacgatatagaaatgatgattggatttaag
ccaagtaaattctggagagtctgttgggcatttgtgaccccaactattttaacatttatt
ctttgcttcagtttttaccagtgggaaccaatgacttatggagtttaccattatccaggc
tggtccatggtgcttggatggctgatgctggcttgctcagttatctggatcccagttatg
tttgtgataaaaatgcatctagccccaggcaaatttattgagtatctcctcaagaagcca
tcatataatttgtgcctaactttgtattcttaccgtgtgttgccagttctaggcactgct
ggagacctttaa
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