Strigops habroptila (Kakapo): 115607391
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Entry
115607391 CDS
T08851
Symbol
SIX4
Name
(RefSeq) homeobox protein SIX4 isoform X1
KO
K15615
homeobox protein SIX4
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shab03000
]
115607391 (SIX4)
Transcription factors [BR:
shab03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
115607391 (SIX4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_TSHZ3
Motif
Other DBs
NCBI-GeneID:
115607391
NCBI-ProteinID:
XP_030340487
UniProt:
A0A672U985
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Position
4:complement(17549919..17561409)
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AA seq
783 aa
AA seq
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MSSASPTDEITSAVEIKQENVMEILSEASKVSPDGAAAGALNPAAPPPPPPPAAAPFPME
HTGSAAAAEEGAADQVLLHTELLARNHHAASSPSSSSSSSSSSQTPLAFSPDHVACVCEA
LQQGGNLDRLARFLWSLPPSDLLRGNESLMKARALVAFHQGIYAELYSILESHNFDSSNH
PLLQELWYKARYTEAERARGRPLGAVDKYRLRRKYPLPRTIWDGEETVYCFKEKSRNALK
ELYKQNRYPSPAEKRNLAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSESDGNPSTEDE
SSKGQEDLSPHPLSSSSDGVTSLSLPGHMEPVYMQQLGNTKIALSSSGVLLNGNLVPAST
SPVFLNGSSFLQGPNGVILNGLSVGASQTVTLNSPKTTSSVVSNGVSITDILSSSSEDVK
DFKLLQASVPNAAAATFSPSNIPVSFPGLIPSSEVKRESIQTAASQDGGSVVTFTAPVQI
NQYGIVQIPNSGTNGQLLNGSIGFSSLQLPPVSVAASQGNVSVSPSTSDGGTFTTESSTV
QQGKVFFSPLAPSAVVYTVPNSGQAVGSVKQEGLERSLVFSQLMPVSQNTQLNVNMSSEN
ISSGGLQSLASSLVNVTPSHNFSLTPPTLLNAAELNSGISESQSMSSPVTSTSTVISISN
TNYATLQNCSLITSQDLLSISTAQPALGEIVSTSGDRVSHPSAQVHQDFVREHRLVLQAV
PDVKENFLPNAESKSTGNLMMLDSKSKYVMSNMVDTVCEELETDKKELAKLQTVQMDEDM
QDL
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgcctcccccacggacgagatcacgagcgcggtggagatcaagcaggaaaat
gtgatggaaatcctctctgaagccagcaaggtgtcccccgacggggccgcggcgggagct
ctcaacccggcggcgccgccgccgccgccccctcccgccgcggccccgttccccatggag
cacacaggctccgccgccgccgcggaggagggagccgcggaccaggtactgctccacacg
gaactcctggccaggaatcaccacgctgcctcctctccctcttcttcttcttcttcctcc
tcctcctcgcagacccccctggctttctccccggaccacgtcgcctgcgtctgcgaagcg
ctgcagcaaggtgggaacctggaccgcctggccaggttcctgtggtctttgcccccgagc
gatttgctacgtggcaacgagagtctgatgaaagcccgggcgctggtggctttccaccag
ggcatctacgccgagctctacagcatcctggagagccacaacttcgactcctccaaccac
ccgctcctgcaggagctctggtacaaggctcgctacaccgaggcggagcgagcccggggc
agacccctgggggcggtggacaagtacaggctgcggaggaaataccctctgcctaggaca
atttgggacggcgaggagaccgtctactgcttcaaggagaagtcccgcaacgcgctgaag
gagctctacaagcagaaccggtacccctcgccggccgagaagcgcaatctggccaagatc
actgggctgtccctcacccaggtcagcaactggtttaagaaccgcaggcagcgggaccgc
aacccttccgagacccagtccaaaagcgagtcagatggcaaccctagcacagaagatgaa
tccagtaaggggcaggaggatttatctccccatccgctctccagctcatctgatggtgtt
accagcctcagccttcctggccacatggagcccgtctacatgcagcagctcggaaacact
aaaatagccttgagctcatctggtgtcttgttgaatggaaacctcgtgcctgccagtacc
tctcctgtctttctcaatggtagctcttttcttcagggacccaacggtgtcattctcaat
ggactcagtgtgggggcttcgcagactgttaccttaaattcgcccaaaaccacatcaagt
gtcgtgagcaatggtgtatctattactgatatactgtcatcttcgtcagaagatgttaag
gacttcaaactccttcaagcttcggtccccaatgccgcagcagccaccttcagccccagc
aacatcccagtctcattcccggggttgataccaagctcagaggtgaaaagggaaagcata
caaactgctgcttcacaagatggaggctctgtagttacttttactgctcctgtccaaata
aaccagtatggcattgtccagatccccaattcaggaacaaatggccagctgctgaacgga
agcatcggtttttcttctctgcagctgcctcctgtttctgtggcagcttcacaaggtaat
gtttcagtaagtcccagcacatctgatgggggaacttttacgactgaatcttcaacagtg
cagcaaggaaaggttttcttcagtcccctcgctccaagtgcggtcgtttatacagttccc
aattcaggccaggcggtaggctctgtcaagcaagaaggactggaaagaagccttgtattt
tctcagttgatgccagtcagtcagaacacgcaactaaatgtaaacatgtcttctgaaaat
atatccagcggaggactccagtccctggcctcctcgttagtgaatgtaacaccttcacat
aatttttccctcacaccaccaactcttttaaatgctgcagaactgaactctggtatctca
gagagccagtccatgtcatcacccgtgaccagtacctctacagtgatatctatcagcaac
actaactatgcaacccttcagaactgttccctcattaccagtcaagatttgttgtccatt
tctacagcacagcctgcacttggagaaatagtttctacaagtggagaccgtgtcagccac
ccctctgcacaagtacatcaagattttgtcagagagcacaggttagttctgcaagccgta
cctgatgtcaaagagaatttcttacctaatgctgagagtaagtcaactggcaatttaatg
atgctggattcaaaatccaagtatgttatgagtaacatggttgacacggtttgtgaagaa
ctggaaacggacaaaaaagaacttgccaaactgcagacagttcagatggatgaagatatg
caagacttgtaa
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