Strigops habroptila (Kakapo): 115607394
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Entry
115607394 CDS
T08851
Symbol
MNAT1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1 isoform X1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03022
Basal transcription factors
shab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115607394 (MNAT1)
09124 Replication and repair
03420 Nucleotide excision repair
115607394 (MNAT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shab03021
]
115607394 (MNAT1)
03400 DNA repair and recombination proteins [BR:
shab03400
]
115607394 (MNAT1)
Transcription machinery [BR:
shab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
115607394 (MNAT1)
DNA repair and recombination proteins [BR:
shab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
115607394 (MNAT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-C3HC4
TRAF3_RING
DUF3292
Calici_MSP
zf-UDP
Motif
Other DBs
NCBI-GeneID:
115607394
NCBI-ProteinID:
XP_030340501
UniProt:
A0A672U994
LinkDB
All DBs
Position
4:17561982..17695037
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AA seq
331 aa
AA seq
DB search
MEAAGGESGGRQREAAAATAMDMDDLGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVELL
FVRGAGNCHECDTLLRKSNFRVQLFEDPAIDKEVEIRKKVLKIYNKREDDFPSLSEYNDF
LEEIEEIVYNLTNNVDLENTKRKMELYQKDNKEVIQKNKIKLTREQEELEEALEVERQES
ERRRLLIQKEEQIQQILKRKNKQALLDDLERSSLPASLLLAQHKDRSTQLEMQVEKPNQV
RPVTFSTGIKMGQTISLAPIPKLEEALYKYQPLQVETYGPQVPELGLLGRLGYLTHVRAA
SPQDVAGGYTSSLACSRALQDAFSGLFWHPS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagcaggaggggagtcaggggggaggcagagggaggcggctgcagccacggcc
atggatatggatgacttgggctgcccgcggtgcaagaccaccaagtaccgcaacccctcc
ttgaagctgatggtgaacgtctgcgggcacacgctatgcgagagctgtgtggaactgctg
tttgtgagaggggctgggaattgccacgagtgcgatacccttctgcgaaagagtaacttc
agggtacagctctttgaggatcctgctatcgacaaggaagtggaaattcggaagaaagtg
ctgaaaatatacaataaaagagaggatgactttcccagtctaagtgaatataatgatttc
ctggaagaaatagaagaaattgtatataacttgaccaacaatgtggatttggagaacacc
aaaaggaaaatggaactgtaccagaaggataacaaagaagtcattcagaaaaataagata
aaactgacgcgggagcaggaagagttggaagaagcgttagaggtagagcgacaggaaagt
gaacgaaggcgactgcttatacagaaagaagaacaaatacaacagatcctaaaaaggaag
aataagcaggcactcttggatgatctggagaggtccagtcttcctgcttcattgctttta
gctcagcataaggacagatctactcagctagaaatgcaagtggaaaaacccaaccaggtc
agaccagttacgttttccactgggatcaaaatgggtcagactatttcactagctcctatt
ccaaagctagaggaagctttgtataagtatcagcctctgcaagtggagacatacggacca
caagttccagagcttggactgctgggaaggctggggtatctcacccacgtgcgagccgcc
tctccgcaggatgtcgctgggggctacacttcctctcttgcttgcagccgagccttacag
gatgctttcagtggtcttttctggcaccccagttag
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