Strigops habroptila (Kakapo): 115607539
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Entry
115607539 CDS
T08851
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shab03041
]
115607539 (PRPF39)
Spliceosome [BR:
shab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115607539 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_12
Mad3_BUB1_I
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
115607539
NCBI-ProteinID:
XP_030340804
UniProt:
A0A672U3R0
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All DBs
Position
4:complement(14188198..14204042)
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AA seq
673 aa
AA seq
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MSAMENNTENIEEEKPTVSNESTDNGPETATEEQQMDFSTEIMSVTEMEQSPDSSPDLNE
ENMQESEIPNIESLQTTDIEAGFPPDFDKFWKVVEDNPQDFTGWVYLLQYVEQENHLPAA
RKAFDRFFTHYPYCYGYWKKYADLEKRHDNVKQSDEVYRRGLQAIPLSVDLWIHYINFLK
ETLDPADPETNSTIRGAYEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTSIYDRILG
IPTQLYSHHFQRFKEHIQNNLPRDFLTTEQFVQLRRELASVNGHSGEDTQPDDDLPSGAE
DITDPAKLITEIENMRHRIIEIHQEMFNHNEHEVSKRWTFEEAIKRPYFHVKPLEKIQLK
NWKEYLEFEIENGTHERVVVLFERCVISCALYEDFWIKYAKYMENHSIEGVRHVYSRACT
IHLPKKPMVHMLWAAFEEQQGNIDEARRILKTFEECILGLAMIRLRRVSLERRHGNMEDA
EHLLEEAVRNAKSVSESSFYAIKLARHLFKVQKNLPKARKVLSEAIEIDKENTKLYLNLL
EMEYSGDLKQNEENILSCFDKAVNGALSIKMRITFSQRKVEFLEDFGSDVTKLLDAYDEH
QALLKEQDSLKRRAENGSEEPDEKKMLTDDPTLASAQMMDGDMQVNQAAYNYNAWYQYNY
QNAWNYGQYYHAT
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctatggagaacaacacagaaaatatagaggaagagaaaccgactgtaagcaat
gagagcacagacaatggccctgaaacagcaacagaagaacagcagatggacttcagtaca
gaaattatgagtgtcactgagatggaacaatcacctgatagttcccctgacctgaatgaa
gagaacatgcaggagagtgaaattcccaatattgaaagtttacagacaacagatattgag
gctggcttccctccagattttgacaagttctggaaagtagtagaggacaatccccaggat
ttcacgggatgggtatatctactacagtacgtagagcaggagaaccacttaccagctgcc
aggaaagcatttgacaggtttttcacacattatccatattgctatggatattggaaaaag
tatgcagaccttgagaagcgacacgacaacgttaagcagtctgatgaggtttatcgcaga
gggcttcaggcaattcctcttagtgttgatctttggatacattatataaacttcttaaag
gagaccttggaccctgctgatcctgaaacgaacagtacgattcgaggcgcctatgaacat
gcagtcttagctgctgggacagatttccgttccgacagactgtgggaaatgtatataaac
tgggaaaatgaacagggaaacctaagggaagttacatccatctatgaccgcatccttgga
attccaacgcagctctacagtcatcacttccagaggtttaaagaacacatacagaacaac
ctgcctcgagactttctgactactgagcagtttgttcagctgcgcagagaattagcgtct
gtgaacggccatagcggggaggacacgcagcctgacgatgacctgccctctggtgctgaa
gatataactgaccctgccaagctgatcactgagatagaaaacatgaggcacaggatcatt
gagattcatcaagaaatgtttaaccacaatgaacatgaagtcagtaagaggtggacgttt
gaagaagcgataaagaggccttactttcacgtaaaacctctggagaaaattcagctgaaa
aactggaaagagtacttagaatttgagatagaaaatggcactcatgagagagttgtggtc
ctctttgaaagatgtgttatttcatgtgccctctatgaggacttctggattaagtatgcc
aaatacatggagaatcatagtattgaaggcgtgaggcatgtctacagcagggcttgtaca
atacatcttcctaagaaaccaatggttcacatgctgtgggctgcctttgaggaacagcag
ggcaacatcgatgaagcaagaagaatcttgaaaacctttgaagagtgtatcctagggctc
gcaatgattcgcttgcgaagagtgagcttagaacgcagacacggaaacatggaagatgct
gaacacctgcttgaagaagctgttagaaatgccaaatcagttagtgaatcgtcattttat
gccatcaaattagctcgacacctcttcaaagtacagaaaaatcttccaaaggcaagaaaa
gtgctgtcagaagccatagaaattgacaaagaaaatacaaagctgtacctcaacttgctt
gaaatggagtacagtggcgatctcaagcagaatgaagaaaacatcctgagctgctttgat
aaagctgtcaatggcgccttgtccataaaaatgaggattacgttttctcagcgaaaagtg
gaattcctcgaagattttggttctgatgtaaccaagcttctggatgcctatgatgaacat
caggcccttctcaaggagcaggattctttgaagaggagagcggagaacgggtcagaggag
ccagatgaaaagaaaatgctcacagatgacccaacactggcatcagcacagatgatggat
ggagacatgcaagtcaatcaggcagcgtataactacaatgcctggtaccagtacaattac
cagaacgcgtggaattatggacagtattatcatgcgacttga
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