Strigops habroptila (Kakapo): 115607557
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Entry
115607557 CDS
T08851
Symbol
BRF1
Name
(RefSeq) transcription factor IIIB 90 kDa subunit isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shab03021
]
115607557 (BRF1)
Transcription machinery [BR:
shab03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
115607557 (BRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
RB_B
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
115607557
NCBI-ProteinID:
XP_030340858
UniProt:
A0A672UF82
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Position
4:19299903..19477423
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AA seq
681 aa
AA seq
DB search
MPGGRVCAACGCSEIEVDAARGDAVCTGCGSVLEDNIIVSEVQFVENSGGGSSAVGQFVS
LDGAGKTPTLGGGFHANLGKESRAQTLQNGKRQIHHLGNQLQLNQHCLDTAFNFFKMAVS
KHLTRGRKMTHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLARELCINAP
AIDPCLYIPRFAHMLEFGDKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARM
HDFRRTVKEVIRVVKVCESTLRKRLTEFEDTPTSQLTIDEFMKIDLEEECDPPSFTAGQK
KLKIQQLEKALSKKLEDFEGEISSYQDEIEIELENSRPKAKGVFANYTKDDSTEDNTSSV
LAEEEAEDEELEAAANHLNKDFYNELHENDRVRKNEDGECRNGNEVLVRPPALESLLGPL
PTAASLGITESIKECISAKDREPGENTGDGELDLSGIDDNEIDRYILNETEAQIKAELWM
KENADYLKEQKEKEARIAKEKELGIYKEHKPKKSAKKREPIQASTAGEAIEKMLEQKKIS
SKINYNVLRDLNSKGSNTPKKEDDSTDDSTNTKKLSRRKSIASRNIANPVNSVGKRLRPL
ISTQLTKKAATEEVTFPNAQAETPALEKAAAVLVESGPVAYNPDEEVEEEEIEDDDDHCM
SALQLMGGNDYGCDVDDDDGY
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcggccgggtgtgcgccgcctgcggctgctcggagatcgaggtggacgcggcg
cgcggggacgcggtgtgcacgggctgcggctcggtgctggaagacaacatcatcgtctct
gaggtgcagttcgtggagaacagcggcggcggctcctccgccgtggggcagttcgtgtcg
ctggacggtgcaggcaaaacaccaactttaggaggaggattccatgccaatctggggaag
gagtcacgagcacaaactctacagaatgggaagcgtcaaattcaccacttgggaaaccag
cttcaactcaatcaacattgtctggatacagcttttaattttttcaagatggctgtgagc
aaacacctaacccgggggagaaagatgacccatgtaattgctgcatgtctctacctggtg
tgtaggacagaaggaactcctcacatgttacttgacctcagtgatcttcttcaggtgaat
gtctatgtgctgggaaaaactttccttctgttggccagagaactctgcataaatgctcca
gctatagatccgtgtttatatattcctcgttttgcacatatgcttgagtttggggataag
aaccacgaggtgtccatgacggctctcaggctgttgcagagaatgaagcgggactggatg
cacaccggccgccggccctccgggctctgcggagcagctctgctagtggcagcaaggatg
catgatttccgacgtactgttaaagaggtcatcagagtggtcaaggtttgtgagtctaca
ttaagaaaaaggttgacagagtttgaagatacaccaacaagtcagttaaccatagatgag
tttatgaagattgacttggaagaagaatgtgatcctccttcatttacagcaggtcaaaaa
aaattgaagatacagcagcttgagaaggcgttatcaaaaaagctggaggattttgaaggt
gaaatatcaagctatcaagatgaaatagagattgaattagaaaacagtagaccaaaagca
aaaggtgtatttgcaaattacactaaagatgattctacagaagataatacctctagcgtt
cttgcagaggaggaggcagaagatgaggaactggaagcagctgctaatcacttaaacaaa
gacttttataatgaacttcatgagaatgatagagtaagaaaaaatgaagatggggaatgc
agaaacggaaatgaagttcttgtaagaccacctgcactggaatccttgcttggcccactc
cccactgcagctagtcttggcataacagagtctataaaagagtgcatatccgctaaggac
cgagagcctggtgagaatacaggagatggtgaattagatctgagcgggatcgatgacaat
gaaatagatcggtatatacttaacgaaacagaagctcagataaaagcagagctatggatg
aaagaaaatgcagattatctgaaggaacaaaaagaaaaggaagcaagaatagcaaaagag
aaagaacttgggatttataaggaacacaagccaaagaaatctgcaaagaagcgggagcca
attcaagccagcacagcaggagaggcaattgaaaagatgttagaacagaagaaaatctca
agtaaaattaattataatgtgctaagggacctgaacagcaaaggaagtaacacaccaaag
aaagaggatgacagcactgatgacagcaccaacaccaagaagctgtcaagaagaaaatct
attgccagtaggaatatagccaaccctgtaaacagtgtgggaaaaagattaagacccttg
atttcaacacagctcactaaaaaggctgccactgaagaggtgacttttccaaatgcacaa
gcagaaacccctgccttggaaaaagcagcagctgtgctagtggagagtggcccagtagct
tacaaccctgatgaagaggtggaagaggaagaaatagaagatgatgatgatcactgcatg
agcgccttgcagttaatgggaggaaacgattatggctgtgatgtggatgatgatgatggc
tattaa
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