Strigops habroptila (Kakapo): 115607816
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Entry
115607816 CDS
T08851
Symbol
CNOT9
Name
(RefSeq) CCR4-NOT transcription complex subunit 9 isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115607816 (CNOT9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115607816 (CNOT9)
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
115607816 (CNOT9)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
115607816
NCBI-ProteinID:
XP_030341340
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All DBs
Position
5:59251574..59265445
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AA seq
304 aa
AA seq
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MCLDCEYRSALLWPVPTALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPM
LWHSFGTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHI
PLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGS
ELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRC
YLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDPRGIP
LPPQ
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtgccttgactgtgaatacagatctgcccttctctggcctgtgccaacagcgctggct
caggttgaccgtgagaagatctaccagtggatcaatgagctctccagccctgagacacgg
gagaatgcgctgctggagctgagcaagaagcgcgagtctgtgcctgaccttgccccgatg
ctgtggcactcctttggcaccatcgcagcgctccttcaggaaattgtaaatatttatcca
tcaatcaaccctccgactctgacagctcatcagtccaacagagtctgcaatgctttagct
ctgctacagtgtgttgcatcgcatcctgaaacaaggtcagcttttctggcagctcatatc
cctctcttcctgtaccccttcttgcacacagtgagcaagacacgtccgtttgagtacctg
cggctcacgagcctcggagtgattggggccttggtaaaaactgatgaacaagaagtgata
aatttcttactgaccacagaaattatccccctgtgcttgcgcattatggaatctggcagt
gaactctccaaaacggttgctacgtttattcttcagaaaatcctcctggatgacacaggg
ctggcatatatctgtcagacttacgagcggttttcccatgttgccatgatactgggtaaa
atggtcctgcagctctccaaggagccgtcggcacggctactgaaacacgttgtgcgctgc
taccttcgcctttccgataaccccagggcacgtgaagctctcaggcagtgccttcctgac
caactgaaggacaccaccttcgcccaggtcctgaaggacgataccaccaccaaacgctgg
ctggctcagctcgtcaagaacctgcaggagggtcaagtcactgacccacggggcatcccg
cttcctccgcaatga
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