Strigops habroptila (Kakapo): 115607894
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Entry
115607894 CDS
T08851
Symbol
TMC2
Name
(RefSeq) transmembrane channel-like protein 2
KO
K21988
transmembrane channel-like protein
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shab02000
]
115607894 (TMC2)
03037 Cilium and associated proteins [BR:
shab03037
]
115607894 (TMC2)
Transporters [BR:
shab02000
]
Other transporters
Pores ion channels [TC:
1
]
115607894 (TMC2)
Cilium and associated proteins [BR:
shab03037
]
Other cilia and associated proteins
Stereociliary proteins
115607894 (TMC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
TRAP_beta
Motif
Other DBs
NCBI-GeneID:
115607894
NCBI-ProteinID:
XP_030341595
LinkDB
All DBs
Position
1:142910971..142980589
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AA seq
973 aa
AA seq
DB search
MSSRGEMSGCPTLSTGVPVEAQPLIYDPTPWRTSRGQPAPQFNNGYQQPRSPQCGAFPED
TRAGIEIDGQVESDTESEEDEVKNKTPKKKPLRKTGRASRLERKKQEKDKEEDRSKEEDN
CSQENEAARTKNYQRKNSGGKKAGEERSQQRGKKAPTKDQKESENKEKKANKKGKEGENK
QKKDRKNSTSASSNSSDEESPSEEELAMLMEQVEQKKKLISTMRNKPWRMVKKLSVLREA
QAFVEKFEGALGKGKGKKLYAYKMMMAKKWVKFKRDFDNFKTQCIPWEMKIKEVESHFGS
SVASYFIFLRWMYGVNLVLFGLIFGLVIIPEVLMGMPYGSMPRKTVPRAEQATAMDFSVL
WDFEGYIKYSALFYGYYNNQRTIGWLKYRLPMAYFMVGVSVFGYSLMVVIRSMARNANES
TADGDDDNFIFSWKMFTSWDYLIGNPETADNKFASITTSFKESIVDEQESNKDENIHLRR
FLRVLANVLIICCLCGSGYLIYFVVKRSQTFSKMQNVGWYERNEVEIVMSLLGMFCPPLF
ETIAALENYHPRIGLKWQLGRIFALFLGNLYTFLLALMDDVNEKLAEEDVVKNITHWTLL
GHFNSSMGNGSSATPPPLDPADVPRGPCWETTVGIEFVRLTVSDILVTYITILVGDFIRA
CFVRFVNYCWCWDLEAGFPSYAEFDISGNVLGLVFNQGMIWMGSFYAPGLVGINVLRLLT
SMYFQCWAVMSSNVPHERVFKASKSNNFYMGLLLLILFLSLLPVAYTIMSLPPSFDCGPF
SGKKRMYEVIQETIELDFPLFVAKIFSYVANPGLIIPAILLMVLAIYYLNAVAEAYQRAN
AELKKKMQMQREEEKNKRNNKASTNPIMQDLEDLFTPSTKNESHPKQAEDKKRESPHGNS
TAGTQGKAAVLDGSPMPAGRGAAFIPPPHMLVTQPLALGVRTPYPGQHRPRGYPLGPFPG
RGRGQPRYPHAAR
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtagaggtgagatgtctggatgtcccaccctgtcgacaggagtgcctgtggag
gcccagccactgatctatgaccccacgccatggagaactagcagaggacagccagcaccc
cagttcaacaatgggtaccagcagccgcgctctccgcagtgtggggctttccctgaggat
actcgtgctggaatagagattgatggacaagtggaaagtgacacagagagtgaagaagat
gaagtaaagaacaagacacccaagaaaaaacccctcaggaaaactggcagagcaagcaga
cttgaaaggaaaaagcaagagaaagacaaagaagaagatagaagtaaagaggaagacaat
tgtagccaagaaaacgaagctgctaggacaaagaactaccaaaggaaaaacagtggtgga
aaaaaggcaggagaggaacgaagccagcagagaggcaaaaaggctcctaccaaagatcaa
aaggagtcagaaaacaaggaaaagaaagcaaacaagaaaggaaaagagggggagaacaaa
cagaagaaagacaggaaaaacagcacttctgcttcttccaactcatctgatgaggagtca
ccgtccgaggaagagcttgccatgctgatggagcaggtggagcaaaagaaaaagctgatc
tccaccatgaggaacaagccctggaggatggtgaagaagctctcagtgctcagggaggca
caagcttttgtagagaagtttgaaggagctctaggaaaagggaagggcaaaaagttgtac
gcgtataagatgatgatggcaaagaaatgggtgaagtttaagagagactttgacaatttc
aaaactcagtgcataccctgggagatgaagataaaagaagtggagagtcactttggctcc
tcagtcgcttcctacttcatatttctgcggtggatgtacggagtgaatcttgtccttttt
ggtttaatatttggactggttataattccagaggtcctgatgggaatgccatacgggagc
atgccaaggaaaactgtaccccgggctgaacaagcaacggctatggatttttcagttcta
tgggattttgagggctatatcaaatactcagcgctcttttacggctactacaacaaccag
aggacaattggctggttaaaatacaggctcccgatggcatatttcatggttggagtcagt
gtatttggctacagcctgatggttgttataagatcgatggcacgcaacgccaatgaaagt
acagcagatggggacgatgacaacttcattttcagctggaaaatgttcaccagctgggac
tacctcattggcaacccagagacagcggacaacaagtttgcatccatcaccaccagcttc
aaggagtctatcgtggacgagcaagaaagcaacaaggatgagaacatccacctgaggagg
ttcctgcgggttttggccaatgtcctcatcatatgctgcttgtgtggaagcggttacctc
atttatttcgtggtgaaacgctcccagacgttttctaaaatgcaaaatgttgggtggtat
gaaagaaatgaggttgaaatcgtgatgtccttgctgggcatgttttgccctccgctgttt
gaaaccatcgctgcactagaaaactaccatccccgcatcgggctgaagtggcagctgggg
cgcatcttcgcgctcttccttgggaacctctacacattcctgttggccttgatggatgat
gtcaatgaaaaactggctgaagaggacgtggtgaagaacatcacacactggacgctgctt
ggccactttaactcgtccatggggaatggcagcagtgccaccccacctccccttgatcct
gcagatgtgcccaggggaccctgctgggagacaacagtcggcattgagtttgtaaggctc
actgtgtccgacatcctggtgacctacataaccatcctggtgggagacttcatccgagct
tgctttgtcagatttgtgaactactgttggtgctgggacctagaggctggatttccatcc
tatgcagagtttgacataagcggcaatgttttgggtttggtcttcaaccagggaatgatt
tggatgggatccttttacgcaccagggctcgtgggtataaacgtgctgcgcttattaacc
tccatgtattttcagtgctgggctgttatgagtagcaatgtccctcatgaacgagtcttc
aaagcatccaaatctaacaatttttacatgggacttttgctgctgatcctgttcctcagc
ctcctgcccgtggcttacaccatcatgtccctgcctccctcctttgactgcggaccattc
agtggaaagaaaaggatgtatgaagtcattcaagagaccatcgagcttgatttcccactt
tttgttgccaagatcttcagctatgtggcaaatccaggactgatcatacctgcaattctg
ctcatggtccttgccatctattacctgaacgctgtggctgaagcatatcagcgcgccaat
gcagagctgaagaagaagatgcaaatgcaacgtgaagaggagaagaacaagagaaacaac
aaagccagcactaatcccataatgcaagatctggaggatctatttacaccaagtacaaag
aatgaaagtcaccccaagcaagcagaagacaagaaaagagagtctcctcatggaaacagc
actgctgggacacaaggcaaagcagcagtcctggatggcagccccatgcctgctgggaga
ggagcagcgttcatcccaccgccccacatgttggtgacacagccgctggcactgggggtc
cgcacaccttaccctggccagcacaggccaaggggatacccactggggccattccctggg
agggggagagggcagccacgctacccacatgctgctcgataa
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