Strigops habroptila (Kakapo): 115608034
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Entry
115608034 CDS
T08851
Symbol
POLL
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03410
Base excision repair
shab03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
115608034 (POLL)
03450 Non-homologous end-joining
115608034 (POLL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shab03400
]
115608034 (POLL)
Enzymes [BR:
shab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
115608034 (POLL)
DNA repair and recombination proteins [BR:
shab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
115608034 (POLL)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
115608034 (POLL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
BRCT
BRCT_2
HHH_5
LIG3_BRCT
PTCB-BRCT
NTP_transf_2
HHH
zf-LYAR
Motif
Other DBs
NCBI-GeneID:
115608034
NCBI-ProteinID:
XP_030341985
UniProt:
A0A672TN44
LinkDB
All DBs
Position
5:68071727..68084336
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AA seq
580 aa
AA seq
DB search
MEPRGIVKAFPKRKKVRDDLGKSIPPKIPKEEGTEIPEAEWLNPVTAYVLQAGIGQARAE
IFHKQIVQNGGVVHNQLSSEVTHVIVAEDMDCDRAFRLLKLTKLPSGLQLVKASWLSACI
RDQKLLSTAGYHVFIPRRYLEEGELQKEEQQQVLGSEEVQPPAEGGAVKPNTEAQLEDSS
QRGLGTLGQQQLAEKDSGDEDSEGEDAGVTQGDLEALISGHYPVKSSEETSGSSSTVAQP
GSKWVCAQSSNSKKENHNQCITEKLEVLAKAYTVQGDKWRALGYSKAINALKSYHKPVTS
YQEACKIPGIGKRMAEKILEILESGHLRKLDHISESVPVLELFSNIWGAGAKTAQMWYQQ
GFRTLDDIRTKATLTHQQAVGLKHYTDFQERMPREEAAEIEHTVRQAALALKPGLVCVAC
GSYRRGKPTCGDVDVLVTHPDGKSHRGVFSKLLDSLHRSGFLTDDLVSQEDNGEQKKYLG
VCRLPGPARRHRRLDIIVVPYREFTCALLYFTGSAHFNRSMRALAKTKGMSLSEHALSSA
VVRGPGGVKVVSGHTLPTPTERDVFIQLGLPYREPSERDW
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggagccacgaggcattgtcaaagcctttcccaagaggaagaaagtgagggatgactta
gggaaaagcatccctccaaagatcccaaaagaggaaggaacagagatacccgaggcagag
tggctgaatccagttactgcctacgtgctgcaagctggcattggccaagccagggcggag
atcttccacaagcagattgtccagaatggaggtgttgtacacaaccagctctcctcggag
gtgacacatgtcattgtggctgaagacatggactgtgatcgggcttttcggctccttaaa
ttaaccaagctgccttcagggctgcagctagtgaaggcatcctggctgagtgcttgcatt
agagaccagaagctgctgagtactgctggctaccatgtctttatccctcgcaggtacctg
gaggagggagaactccaaaaagaggagcagcagcaggtcctgggcagtgaagaggttcag
cctccagcagaggggggagcagtgaagccaaatactgaagcacagttggaggattcctcg
cagcgaggcctgggcacccttggacagcagcagctggctgagaaagactctggtgatgaa
gacagtgaaggagaagatgctggtgtcacccagggagatctggaagcattgatttctggc
cattaccctgtgaaatcatccgaggagaccagtggcagctcttccacagtggcccagcct
ggcagcaagtgggtttgtgcccagtcctccaacagcaagaaggaaaatcacaaccagtgc
atcacagagaagctggaagtactggcaaaggcctacactgtccagggggacaagtggaga
gctctgggctactccaaagccatcaatgcactcaagagctaccacaaaccagtcacctcc
taccaggaagcctgtaaaatccctgggattgggaagcggatggcagagaagatcctggag
atcttggagagcgggcatctgcgcaagctggatcacatcagtgagagtgtgcccgtgctg
gagttgttttctaacatctggggagcaggggctaagacagctcagatgtggtaccagcag
ggtttccggacactggatgatatccgcaccaaggcgaccctcacccaccagcaggctgtg
gggctgaagcactacacagatttccaggagcgcatgcctcgggaggaggctgcagaaata
gaacacactgtcagacaagctgccctggccctgaaacctgggcttgtgtgtgtggcatgt
ggctcctaccgtcgggggaagcccacctgtggagatgtggatgtgctggtcactcaccca
gatgggaagtctcaccgtggggtgttcagcaagctgcttgacagcctccacaggagtggc
ttccttacggatgacctcgtgagtcaggaggacaacggtgagcagaagaagtacctggga
gtgtgccgcctgcccgggccagcccggcgtcaccgccggcttgacatcatcgtggtgccc
tacagggagtttacctgtgccctgctctacttcactggctcggctcacttcaaccgctcc
atgcgagccctggccaagaccaagggcatgagcctgtcagaacatgccctcagctcggcc
gtggtgcgaggccctggaggtgtcaaggtggtatctggtcatactttgcccactcccaca
gagagagatgtcttcattcagctggggctgccttaccgggagccctctgaacgggactgg
tga
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