Strigops habroptila (Kakapo): 115608066
Help
Entry
115608066 CDS
T08851
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115608066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115608066
04121 Ubiquitin system [BR:
shab04121
]
115608066
03036 Chromosome and associated proteins [BR:
shab03036
]
115608066
03400 DNA repair and recombination proteins [BR:
shab03400
]
115608066
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
115608066
Ubiquitin system [BR:
shab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
115608066
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
115608066
DNA repair and recombination proteins [BR:
shab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
115608066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_5
Ank_3
zf-RING_6
Ank_KRIT1
ANK_LRRK2
BRCT
zf-RING_5
RTT107_BRCT_5
PTCB-BRCT
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
115608066
NCBI-ProteinID:
XP_030342063
LinkDB
All DBs
Position
5:1535425..1580983
Genome browser
AA seq
810 aa
AA seq
DB search
MRAAGARSFPALRSGGKRGIRSGGGRRQRQQEEMREALARPLGQPARRGCRRSRHGAARP
AWARTAAALGRLERALSCSAAPASCGAVSLGQCEHVFCLSCVGDCVGIQCPVCHMPAWVQ
DAQINRQLDNMIQLCSKLRHLLGADTSDSTEGMSTPTDSDVGQKNKKEEIKMWFSPRSRK
IRCIVKKSHPKTKSDDLCQDTGSVYDFISSPPREKPSNLRKKPTQRQSKKMKKKRLADIN
KVWSLEKPEQKGRVEEETPKEKCVTICSQPVVLCTPESNSPGETVQQESVKEADSSKSTE
SVEILPQVKSSENKDNSEVACLPQVSKEKNCTTETSLSIENESVPLKRGREQSRLPVASQ
SKRPRRTERSIIEKSVGQAGCLEELPQGSPISPVAEHKTPVQVSSSVSKLTDTVIKTRSS
AVSQAINSPSESPSTLATSKTCNQVEIPHSPSVLKSPGGNTIGRRNYKGETLLHVASIKG
DLAAVEQLLKNGADPNVKDNAGWTPLHEACNHGHREVVELLLQYRALVNITGYQNDSPLH
DAARNGHVSIVELLLLHGASRDAVNIFGLRPVDYAESEKMKSVLMLPVKNESFPLNQPSE
VLSSSQPRGGPLGILGSNLSLEQQKLLNKLATVLKAQRCTDFNSRVTHLIIPDVPIPKTV
KCMMAVLTGCWVLKFKWVRACLRTTVREQEEKYEVQGGPRRGRLNREQLLPKLFDGCYFY
FLGSFGDLAAVEQLLKNGADPNVKDNAGWTPLHEACNHGHREVVELLLQYRALVNITGYQ
NDSPLHDAARNGHVSIVELLLLHGASRDAV
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgctgcgggggcgcgcagcttccccgcgctgcgcagcggtggcaagcggggaatt
cggagcggcggcgggcggcggcagcggcagcaggaggagatgcgggaggcgcttgcgcgg
ccgctcgggcaaccggcccgccgcgggtgccgccgatcccgccatggcgccgcccggccc
gcttgggcccgcaccgccgccgcgctggggcggctggagagagcgctgagctgctccgct
gcgccggcgtcctgcggggccgtgtccctggggcagtgcgagcacgtcttctgcctatct
tgtgtgggtgactgtgttggcatacaatgcccagtgtgccacatgccagcgtgggtgcaa
gatgcacagataaaccggcaacttgataacatgattcagctttgcagcaagctgcggcat
ctcctgggtgcagacacctcagattcaacagaaggtatgtccacaccaaccgactcagat
gttggacaaaagaataagaaggaagagataaaaatgtggttcagcccaagaagtaggaag
attcgatgcatcgtgaagaagagtcaccctaagactaaaagcgatgacctttgtcaagat
acgggctcagtttatgatttcatttcttcacctccccgtgaaaagccctccaacctgaga
aaaaagccaacacagagacagagtaagaagatgaagaagaaacgtctagcagacattaac
aaagtgtggagcttagagaagcctgagcagaaaggaagagttgaggaggagactcctaag
gagaagtgtgtgaccatctgcagtcaaccagtagtcctgtgcactccagaatcaaatagc
cctggagagacagtccagcaggagtctgtaaaggaagctgactccagcaaaagtacagaa
agtgtggaaatactgccacaggtaaaatcctcagagaacaaagacaacagcgaggttgca
tgccttccacaagtcagcaaggaaaaaaattgtactacagagacatcactgtcaatagaa
aatgaatctgtacctttaaaacgtggaagggagcaatccagacttccagttgcttctcag
tctaaaagaccaagaagaactgaaagaagcattattgagaagtcagtcggtcaggcaggt
tgcttagaggagttacctcagggtagccccatctccccagtggctgaacacaagacacca
gttcaggtttcttcctctgtatccaaactcactgacaccgtaataaagacaagaagctct
gcagtctctcaagcaataaatagtccttcagaatctccctctaccctagctacttctaag
acttgtaatcaagtagaaataccacacagtccttccgtgttgaagtcgcccggtggtaac
acaattggcagaagaaattacaaaggagagaccttactccatgttgcttccatcaagggt
gacttagcagctgttgaacagctgctgaaaaatggggcagatcccaatgtcaaagataac
gcgggctggacgccactgcacgaggcatgtaatcatgggcacagagaagtggtggagctg
ttgctacagtacagggcactggtgaatattacggggtatcagaacgactcgcctcttcat
gatgctgccaggaatgggcatgtgagcattgttgagctgctgcttttgcatggtgcctcg
cgtgatgcagttaatatatttggtctgcggcctgtggactatgcagaaagtgaaaagatg
aagtctgtgctaatgttaccagtgaagaatgaatcatttccacttaaccagccctctgag
gtactgagctccagccagccaagaggtggacctcttggtatattggggagcaatcttagt
ttggagcaacagaagttgctgaacaaactagcaacagttctgaaggctcaaagatgtact
gactttaacagcagagtaactcatctcattatccctgatgttccaatcccaaaaactgtc
aaatgtatgatggctgttctgactggatgttgggtcctcaagttcaaatgggtacgagcc
tgtttacggaccacagttcgagaacaagaagagaagtatgaagttcaaggtggcccacga
agaggccggctcaacagagaacaactgctgcctaaattgtttgatggatgctacttctat
tttttgggatctttcggtgacttagcagctgttgaacagctgctgaaaaatggggcagat
cccaatgtcaaagataacgcgggctggacgccactgcacgaggcatgtaatcatgggcac
agagaagtggtggagctgttgctacagtacagggcactggtgaatattacggggtatcag
aacgactcgcctcttcatgatgctgccaggaatgggcatgtgagcattgttgagctgctg
cttttgcatggtgcctcgcgtgatgcagtgtaa
DBGET
integrated database retrieval system
