Strigops habroptila (Kakapo): 115608080
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Entry
115608080 CDS
T08851
Symbol
HSPD1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115608080 (HSPD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115608080 (HSPD1)
03110 Chaperones and folding catalysts [BR:
shab03110
]
115608080 (HSPD1)
03029 Mitochondrial biogenesis [BR:
shab03029
]
115608080 (HSPD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shab04147
]
115608080 (HSPD1)
Enzymes [BR:
shab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
115608080 (HSPD1)
Messenger RNA biogenesis [BR:
shab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
115608080 (HSPD1)
Chaperones and folding catalysts [BR:
shab03110
]
Heat shock proteins
HSP60 / Chaperonin
115608080 (HSPD1)
Mitochondrial biogenesis [BR:
shab03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
115608080 (HSPD1)
Exosome [BR:
shab04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115608080 (HSPD1)
Exosomal proteins of other body fluids (saliva and urine)
115608080 (HSPD1)
Exosomal proteins of breast cancer cells
115608080 (HSPD1)
Exosomal proteins of colorectal cancer cells
115608080 (HSPD1)
Exosomal proteins of bladder cancer cells
115608080 (HSPD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
115608080
NCBI-ProteinID:
XP_030342119
UniProt:
A0A672V5N8
LinkDB
All DBs
Position
5:complement(11248090..11258691)
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AA seq
680 aa
AA seq
DB search
MTVPEGSGSGGPRNMGVSCGGPPRMRAAVLAPRARARSRVVAGRGPRGYAGSRARRCGAT
HGPAPGAGRGRGGESPARCCSCAQTCPLSSRSGRWRRPLLPAALPTDMLRLPTVLRQIRP
VSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGRTVIIEQSWGSPKV
TKDGVTVAKAIDLKDKYKNIGARLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISK
GANPVEIRRGVMLAVDAVIAELKKLSKPVTTPEEIAQVATISANGDQEVGNIISDAMKKV
GRKGVITVKDGKTLNDELEIIEGMKFDRGYISPYFINTTKGQKCEFQDAYVLISEKKISS
VQSIVPALEIANANRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAVKAPGFGDNRKNQL
KDMAIATGGAVFGEEGLTLNVEDIQPHDFGKVGEVIVTKDDTMLLKGKGEKAQIEKRIQE
IIEQLEVTTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAVE
EGIVPGGGCALLRCIPALDALVPANEDQKIGIEIIKRTLRIPAMTIAKNAGVEGSLIVEK
ILQSPSEVGYDAMLGDFVNMVEKGIIDPTKVVRTALMDAAGVASLLSTAEAVVTEMPKEE
KEPAMGGMGGMGGGMGGGMF
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttccagaaggttctggaagtggcgggccccggaacatgggtgtttcatgcggg
ggccccccgcgcatgcgcgcggcagtgctggcgccgcgggcccgggcgcggtcgcgggtg
gtggcggggcggggcccgcgcggttatgctggttcccgggcccggcggtgcggagccaca
catgggccggcgcctggcgcggggcggggcagaggcggtgagagcccggcgcggtgctgt
tcctgcgcgcagacctgcccgctcagctcccgctccggacggtggaggcgcccgctgctt
cccgccgcgctgcccacagacatgctccgtttaccgacagtactccgtcagataagacca
gtgtccagagcactcgccccccatctaacacgagcatatgcaaaagatgttaagttcgga
gcagatgctagagctcttatgcttcagggagtagatcttctagcagatgctgtagcagtc
accatggggccaaagggaagaacagttattattgaacagagctggggaagtcccaaagtg
acaaaagacggtgtgacagtagcaaaagcaattgacttaaaagacaagtacaaaaatatt
ggagccaggttagttcaagatgttgccaacaatacaaacgaagaagcgggagatggtacc
accactgcaacggtgcttgcacgtgccattgccaaggaaggctttgagaagatcagcaaa
ggcgctaatccagtagaaatcaggaggggggtgatgctggcagtcgatgctgtcatagct
gaactgaagaagctgtccaaacctgttacaactccagaagaaattgcacaggttgccaca
atatcagcaaatggagatcaggaagttgggaatataatctccgatgcaatgaagaaagtt
ggacgaaagggtgtgatcactgtcaaggatggaaaaactctaaacgatgaattggagatc
attgagggtatgaagtttgacagaggctacatctcgccatattttattaataccaccaaa
ggccagaaatgtgaattccaggatgcttatgttttaatcagtgaaaagaaaatctctagt
gtacagtccatagtccccgctcttgaaattgccaatgctaaccgcaaacctttggtcatt
attgctgaagatgttgatggagaagccctcagcactctagtcttaaacagactgaaggtt
ggtcttcaagttgttgctgtaaaagcaccaggttttggtgacaacaggaaaaaccagctt
aaggatatggcaattgctactggtggtgctgtatttggagaagagggtttgaccctaaat
gtggaagatattcagccgcatgactttggtaaagttggagaggtcattgtgacaaaagat
gataccatgctcctaaagggaaagggtgaaaaggctcaaattgaaaagcgcattcaggag
atcattgagcagctggaggtcaccacaagcgaatatgagaaagagaagctgaacgagcgg
ttggccaaactctctgatggagtagcagtattgaaggttggtggcaccagtgatgttgaa
gtgaatgagaagaaggacagagttactgacgccctgaacgcgacccgtgctgccgtggag
gagggcattgttccgggcggcggctgcgcgctgcttcgctgcattccagcattagatgct
ttagttccagctaatgaagatcagaaaattggcattgaaataatcaagaggacactgaga
atcccagcaatgacgatcgcaaagaacgcgggtgttgaaggatcactaatagttgagaaa
atcctgcagagtccctcagaagttggctacgatgcaatgctcggggacttcgtaaatatg
gtagaaaaaggaatcatagaccccacgaaggttgtgagaactgctctgatggatgctgcg
ggtgtcgcatctctcttatcgacagcagaagcagtggtcaccgagatgccaaaagaagaa
aaggagccggcgatgggaggaatgggtgggatggggggaggaatgggagggggcatgttc
taa
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