Strigops habroptila (Kakapo): 115608139
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Entry
115608139 CDS
T08851
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
115608139 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shab03400
]
115608139 (XRCC5)
DNA repair and recombination proteins [BR:
shab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
115608139 (XRCC5)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
DUF6005
FeThRed_B
Motif
Other DBs
NCBI-GeneID:
115608139
NCBI-ProteinID:
XP_030342270
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Position
5:58042157..58107759
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AA seq
730 aa
AA seq
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MARSGKVAIVLCLDVGFTMSSSAPGEECSLEQAKKIMTKFVQRQVFAESKDEIAVVLFGT
DGTRNDLASRDQYQNITVHRSLMLPDFDLLEDIQDVIKPGSEQADFLDAIIVCMDLLQKQ
TIGKKYEKRHIELFTDLSSPVSEDQLEIIIANLKKTGISLQFFLPFPVDVDDGGGDPSAG
VHSHIHRNPFPRKGLTEQQKEGIDVVRKLMHTLDEEGGLEEIYTFRESLERLSMFKKIER
RPMAWPCQLTIGSNLSIRIVAYKSVTEEKVKKVWTTVDAKTLRKDDVQKETVYCLNDDVE
TEVQKDDTIQGFRYGSDIVPFSKEDEEQMKYKTEAKCFSVLGFSRSSQIQRHCYMGNQVL
KVFAAKDDENAAVAFSALVHALDELKVVAVVRYAYDRRCNPQIGSAFPYIKDAYECLIYV
QLPYMEDLRQYIFSSLKNNKKYIPTADQLSAVDSLIDSMNLVYEADDGETFEDLFKPSKI
PNPHFQRLYQCLQHKAFHPNEPLPPIEEHILEMLEMPSVVKERCQGPLEKIKALFPLKEV
GKKKEKMTAQDIFKDSSEDGPNPKKPKIEDEEGSFSIMKLAEGNVTSVGSVNPAEDFRIL
VRQKNADFKDVSQQLINRIDQFLENKGSQYYMKGINCIRVFREEAVKLSKVQCFNDFLQA
LKSKVEDKALADFWEIMIQDRISLITKDEAKESSVTSEEAEKFLAPKEKKNEILPPTDEG
GDVDDLLDMM
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcagcggcaaggtggccatagtcctgtgcctggatgtaggctttacaatgagc
agttctgcccctggtgaggagtgttcacttgaacaagccaagaagattatgacaaagttt
gtgcagcgacaggtttttgctgagagtaaagatgagatcgctgtagttttgtttggcact
gatggtactaggaatgaccttgccagtagggatcaataccaaaacattactgtacatagg
tcactaatgctgccagattttgatctgctcgaagacattcaagatgtgattaaaccaggc
tctgaacaagcagactttctggatgcaattattgtgtgcatggacttgcttcagaagcaa
acaataggaaagaagtatgagaagagacacattgaactgtttacagacctcagtagtcca
gtcagtgaggatcagctggaaattatcattgctaacttgaagaaaacaggaatttcactt
cagttttttctgccatttccagtggatgttgatgatggaggtggagatccaagtgccggt
gtacattctcatattcacagaaatccttttccaagaaagggtttaactgagcaacagaag
gaaggcatcgatgtggtgaggaaactgatgcatactttggacgaagaaggagggctggaa
gaaatttatactttcagagaaagcctggagcgtctttcaatgtttaagaaaatagaaaga
agacctatggcttggccctgccagctcactattggttctaatttgtctataaggattgtg
gcctacaaatcagtcacagaagagaaggtgaaaaaggtttggacaactgtggatgctaaa
accctcagaaaagatgatgtgcagaaagaaactgtttactgcttgaatgatgatgttgag
acagaggttcaaaaagatgatactattcaagggtttcgctatgggagtgatatagttcct
ttttccaaggaagacgaagagcaaatgaaatacaaaacagaagcaaaatgcttttctgtt
ttgggattcagcagatcctctcagatccagaggcattgctacatgggcaaccaggttttg
aaggtctttgcagcaaaagatgatgagaatgcagcagttgctttttctgcccttgttcat
gcattggatgagttgaaagtagtagctgtagtacgttatgcttatgatagaagatgcaac
ccacaaattggatcagcttttccatatattaaggatgcatatgagtgtctcatctatgtg
caactaccctacatggaagacttaagacagtatatattttcatccttgaaaaacaataaa
aaatacattcctacagcggatcagttatctgctgttgactctttgattgattctatgaat
ttggtttatgaagctgatgacggagaaacttttgaggacctgtttaagcccagcaaaatt
ccaaaccctcattttcagaggttgtatcagtgtttgcagcataaggcttttcaccccaat
gagccattgccaccaattgaagagcacattttagagatgctggagatgcccagtgtggta
aaagaaaggtgtcagggtcctcttgaaaaaataaaagcacttttccccctaaaggaggtt
ggcaagaaaaaagaaaagatgactgctcaagacatcttcaaagacagcagtgaagatgga
cccaaccctaagaaaccaaaaattgaagatgaggaaggtagctttagcatcatgaaactt
gctgaaggaaatgtcacctctgttggcagtgttaatccagcagaagatttccgaattctg
gtgaggcagaaaaatgctgacttcaaagacgtgagtcagcagttgataaaccgcattgat
cagttcctggaaaataaaggttcacagtactacatgaaagggatcaattgtatcagagtt
ttcagagaggaggccgtgaagctgtccaaggtccagtgctttaatgattttctgcaggcc
ctgaaatcaaaggtagaagacaaagctttagctgatttctgggagatcatgatacaagac
agaatttctttgatcactaaagatgaagcaaaggaaagttcagtgactagtgaagaggct
gaaaagttcttggctccaaaagaaaagaaaaatgaaattctgcctcccacagatgaaggt
ggtgatgttgatgatttgctggacatgatgtga
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