Strigops habroptila (Kakapo): 115608540
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Entry
115608540 CDS
T08851
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shab04040
]
115608540 (TRPA1)
Ion channels [BR:
shab04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115608540 (TRPA1)
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
DUF5685
Motif
Other DBs
NCBI-GeneID:
115608540
NCBI-ProteinID:
XP_030343353
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Position
1:33016143..33049278
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AA seq
1126 aa
AA seq
DB search
MKRSLLRLCQSREKGAVSSSYQGVVCEADAASVASQDVFKVISDGSACRLRSFIKKNRSG
LTKVDELNATPLHHAAEGGQIELMQLIIDDSSCEVLNVMDSSGNTPLHWATKKNQVESVS
LLLSRGANPNILNSNMMAPLHMAVQSLHNEIVKILVQHSSTDVNLEGEAGNTPMIVACYK
DNPEALTLLIENGGKICKRNKTGCMPVHAAAFSGAKTCMEILLKKGEELGHSAKTHINFT
NNAKCSPLHLAVQSGDLEMIKMCIEFGAQIELKQNEKCTALHFAATQGATEIVKLMMSSY
AGEESIIDAVDGNKETLLHRTALFDHYELAEYLISMGANIDSVDIEGRSPLLLATSCASW
KIVNLLLSKGANVSLKDHLGRNFLHLTVLQPGGLQHLNEKFLQMEHIKNLVVDEDNEGCT
PLHYACRQGVALSVNNLLSLNVSIYSKSRDKKSPLHFAASYGRINTCQRLIRDMKDTRLL
NEGDKKGMTPLHLAAQNGHEKVVQFLLKRGALFLCDYKGWTALHHAAFGGYTRTMQIILD
TNVKCTDRVDEEGNTALHLAAREGHAKAVRLLLDYGAKILFNKALASFFHEAIHNRRKDV
VSAVILHKRWEEAVVTFSHYSSANKCPLLEMVEYLPDSFKLVLDNCIIESSEEKTSRDFY
IEYNFRYLQCPLTLNKKLKDGEDIFYEPLTTLNAMVRHNRMELLSHPVCKEYLLMKWMAY
GFRAHLMNLGIYSLGLIPLTLLVTHIQPGRPLNGTEIYEARPLEYENSYFTRVCMCLVLI
MSLLGICKEIFQLIQQKLKYLLDYSNLLDWTIYTTSIIFVSSLFINTPAHLQWECGAIAV
YLSWMNFLLYLQRFENYGIYVVMFWEILRTLIRIAVVFFFLILAFGLSFFVLLGSQQTYS
TPLLSVMKTFAMMLGDINYHDAFLDPLLSSELPYPFLSYTVLIIFTLLIPILLMNLLIGL
AVGDIAEVQKYAALKRIAMQVNLHTNLEKKLPFWFLSRVDQESITVYPNRPRYCGFMSVF
QYCFGCEDSTTDAQSTDTTLELEVLKQKYRLKDISTLLEKQHDLIKLIIQKMEIVSEAED
EDSNDLFQHKFRKRQLEHRNSKWDTVLKAVKTNVPNPSTEKNNSFF
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctctctgctgcggctctgccagtcgcgggagaagggggccgtgtccagctcc
taccagggcgtcgtctgcgaggcggatgccgcctccgtcgcctcacaggatgtcttcaag
gttatttcagatggaagtgcctgtaggctacggagcttcattaagaagaatcgttctggg
cttaccaaagtggatgaattaaatgctaccccccttcatcatgctgcagaaggaggacaa
atagaattaatgcagttgatcatagacgattcttcctgtgaagtattaaatgtgatggat
tcatctggaaataccccactgcactgggccacaaagaaaaaccaggttgaaagtgtcagt
ttgcttctgagcagaggagccaatccaaatattctcaactccaatatgatggcacctctg
catatggctgtgcagtccctgcataatgaaatcgttaagattttagtccagcatagcagt
acagatgttaatttggaaggcgaagcagggaacacacctatgattgtagcatgttacaag
gataatcctgaagcattgacactcctgattgaaaacggaggaaaaatatgtaaacggaac
aaaacaggatgcatgcctgtccatgcagctgcattttcaggtgcaaaaacgtgtatggaa
attctcttaaaaaaaggtgaagaattgggtcactctgctaaaacccatatcaattttacc
aataatgcaaagtgcagtccacttcatttggcagttcaaagtggggaccttgaaatgatt
aaaatgtgcattgaatttggagcccaaatcgaactaaaacagaatgaaaaatgcacagca
cttcattttgctgccactcaaggagcaactgagattgtaaagttaatgatgtcatcctat
gctggtgaggaatccattattgatgctgtggatgggaataaggaaactctgcttcacagg
acagcattgtttgatcattacgaactggcagagtatttgatttcaatgggggctaatatt
gatagtgttgacatagaaggtcgatccccacttctgttggccacttcctgtgcatcatgg
aaaattgtgaatttactgctctcaaaaggagcaaatgtatcattaaaagatcatcttggt
cggaatttcttgcatttgaccgtattgcaacctggaggattacagcatctaaatgagaaa
tttttgcagatggaacacattaaaaatcttgtagtggatgaagataatgaaggatgcact
ccattgcattatgcatgcagacaaggtgtggccctctctgtaaataatttactcagcctc
aatgtttccatctactctaagagcagggacaagaagtcaccattacactttgctgccagc
tacgggcgcatcaatacatgtcagcgacttataagagatatgaaagacacaagacttttg
aatgaaggtgataagaaaggaatgactcctcttcatttggcagcccaaaatggtcatgag
aaagtagttcagtttcttctgaagagaggagccctttttctctgtgattataaaggctgg
acagccctgcatcatgctgccttcggaggatacactcgcacaatgcagatcattttggat
actaatgtgaagtgtactgacagagtggatgaagaagggaacacagctttgcacctggct
gcgagagaaggacacgcaaaagcagtaagattacttcttgactatggtgcaaaaattctg
ttcaacaaagcattagcttcttttttccatgaagcaatacacaataggagaaaagatgta
gtgtctgctgtaattttgcacaaaagatgggaagaagctgttgtgacattctctcactat
tctagtgccaataagtgtcctttgctagaaatggttgagtatcttcctgattcgtttaaa
ctggttttggacaactgcataattgagtcttcagaggaaaagacaagtcgagacttctat
attgaatataacttccgatatcttcagtgtcccttgacgcttaacaagaagctaaaggat
ggtgaagacattttctatgaaccacttaccactttaaacgccatggtacgccacaatcgc
atggagctgctcagtcatcctgtgtgtaaagaatatttgcttatgaaatggatggcctac
gggtttcgagcacatctaatgaatttaggcatatattctctcggtctcatcccactgact
cttctggtcactcacatacagccaggaagacctttgaatggaacagagatctatgaagca
aggccgttagaatatgagaactcgtacttcacaagggtgtgtatgtgtttagttttaatt
atgagtttactgggaatctgcaaagaaatatttcagctgattcagcagaaattgaaatat
ctgttggattactccaatctactggactggacaatttatacgacaagcataatttttgtg
tcttctttatttattaatacaccagctcatttgcagtgggaatgtggagcaattgctgta
tatttgtcttggatgaacttcttgctttaccttcaacgatttgaaaactatggcatctat
gttgtgatgttctgggaaattttgaggacattgatacggattgctgttgttttctttttc
ctgatattggcctttggactgagtttctttgtccttttgggttcacagcaaacatatagc
acacctctgctttctgtaatgaagacatttgcaatgatgctgggagacattaattaccat
gatgcattccttgatccattactaagcagtgaattgccatatccttttctgagttacaca
gttctcattatatttaccttgcttattccaatccttcttatgaacttgctaattggtttg
gctgttggggacatagctgaagtacagaaatatgctgcactcaaaaggattgcaatgcag
gttaatcttcacaccaacttagagaagaagctaccattttggttcttaagtcgagtggat
caggaatcaattactgtatatccaaacagaccaagatactgtggatttatgagcgtgttc
cagtattgctttgggtgtgaggactctaccacagatgcacagagcactgatacaacatta
gaactggaagttctgaagcagaaatacaggctcaaagatatatcaacactgttggaaaag
caacatgacctcattaaattgattatccaaaaaatggagatagtatcagaggcggaggat
gaagacagcaatgatttgtttcagcacaagtttaggaaaaggcagttagagcacaggaat
agtaaatgggatacagtgttaaaagctgttaaaacaaatgtgcccaacccaagcacagaa
aagaacaatagcttcttctag
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