KEGG   Strigops habroptila (Kakapo): 115608678
Entry
115608678         CDS       T08851                                 
Symbol
RIF1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
  KO
K11138  telomere-associated protein RIF1
Organism
shab  Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:shab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shab03032]
    115608678 (RIF1)
DNA replication proteins [BR:shab03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    115608678 (RIF1)
SSDB
Motif
Pfam: Rif1_N HtaA
Other DBs
NCBI-GeneID: 115608678
NCBI-ProteinID: XP_030343714
LinkDB
Position
5:complement(43650099..43685622)
AA seq 2313 aa
MSAPAAGSSLQPLLETLEDPAAPPGELTDAHLTIVNRLTGEEGKGFTADVRKHFPQLCKV
FKVHISSQNVELSNAALQALGFCVFNSSITSELPATEIRDLLSIVNSVAVKTSDKNTRTR
ALWVISKQTFPSEIVKKEVSGIISTLETILTKGDVQSMVVEYEALNVVIRLMEQTPAQMG
EEAVRWAKLIIPLVVHSAHKVQLRGATALEMGMPLLLQKQQEVAAVTEHLMTTKLISELH
KLFSTKNETYVLKLWPLFVKLLGKTLHRSGSFINSLLQLEELGFRSGSPVVKKIAFIAWK
SLIDNFALNPDILCSAKRLKLLMQPLSSIHVRTEALALTKLEVWWYLLMRLGPQLPANFE
QVCVPLIQSTLSLDSSPALQGTPSRVPGNQSLVCATPVQKSGPYPFASPATPRMNLNSST
AGLVVIPSIQLLGIEMLLHFLMGPEVLDFAKQNKLVLSLEPLQYPLIGSPSFFCKHASTL
ISAVQDGFIAIGKEVPDCMLNVIWKDINGYVKTAIESGNKKEKQGSEILTMLLQALKNIV
KSNSLPVQKILSLIDITVKELPPKVLGSPAYQVADMDLLNGTPALFLIQLPFHNSLLKCC
VTDERFFVILETLVGYVLSGPTSPLAFSESVICIINQSAKQVENKEHLWRMWRIVVNPLT
DWINRTNEVNQGDALEHNFSAVYSALLLPVSQIFPAQGFPQPTMKSLLRTWSDLYRAFAR
CAALVATAEENLCCEELCAKIISGLEGETPVMISMMDGLTHIVSVMVDCINFAPYGTKYQ
PKHRSPQTPTDWSKKKKEPLGKLASLFKLLVMLLNSFHVFSSKEICSETLVSVGPSIIAI
LHNIISRVSLPSVIGTMFAIFSKPLAVFYERTKLADVSKVYSNLNNKLEKLLAEVIQCLQ
SHCTGSYDSKLLEQISPLLCVAFQHKSKQIHNQCSHFWNATFSKTTSLKYPEELKSVLSQ
AKKKIPLLLPGFESIEGAEEYSGPFSDAMENSQLDAKISGMEVKLGQNRGSILAQMSEQK
DEVKDKSSNVQVTSAKLKLEFSSSKAKSEILLEEEKSIDFVYIPPETKARVLTERQKEVL
RSKRVDIPAMYNNLDASQDSTLFSQYTQSQEDSLEKSSLIENAKEDTKTKPQEENAKSEG
CTNKSDNPLKNAAYVNKSPLTHLEESSTLNSEGESRRETTGMILEEPSAGEGLEGSTVET
ASKELLAGNENTSNVSNSSTSSDIISGTPQPASRRQSFITLEKFGSSENRPFSLSALNGI
SEMSGGASMTGKQEKTSAKSEKSGEENKKPTKSEQIFTAIRRLTRRQSKMEHQGNKQSKS
LIRSEQEKSVQESCASKNIKNNLSSAVEDVERSLLAQSQVLHSTELEIKRAEDLIAETEK
TQALDTDSKENTPPETTVSSDQVTSDDSQAPHASPSQKALRRSSRRRSETVESTAASQDK
EDGHQKRDRCKDNEKSGQKKVPQAKDDVSQKQKAVSGKATENTNKESNLHERTAEDRNSE
ESPASAGPDEEVNKSARRSEENLKADTEGQDCSSSTAGQKMERPRYHTRRASQGLLSSIE
NSEADGSEGKEESMRKKRSAKAKNRSDFLEGKLKDLQPGSHSHEVSSQRNETKDLLEARK
GELSCEVSTDAALTSEPCGPKTQVIPTDASKAMGSASSKGSSGVQNGSVEQNKRHTLVES
VTNPCVADPDLKAAEKDEDIVKRTVVEDCHATVLPESVPAANASGGDLSFSQIPECQHKR
SKRLKKPKSCDCCNKKSKQEVMSLTELKNGNTHELSEPQITPVQTPGNTSEMSSNSDFDK
RLSMAPCAMSTPLHPPKEPSALNLEREGSSEDNLEGKSSVLEEDLENPVCVAGEITDSVL
EIKEPADEDGQTEQCLSKCVPEEPGGSDLIAGNQDEEPGATEEEISLNEQLEEIPEALVD
VSKPEEKQMNELESSWDDKEVAENAVGEMCVNQDKEIKEELEETEITVPQNMALDKGDAV
ENNIVDSPQKPEDDASLVVVNESPNGMQARCMWSPSASPSTSILKRGVKRNQDDDSLSPT
NKIRRVSFANPIYQEGLADDIDRRSPVIRSHSSPSSRSLKILSNIQAKHITTPTKGFLSP
GSRNPKFKSSKKCLITEMTKESLPGPMECMYPALVGCKAPVDVILPQITSNICARGLGQL
IRAKNIKTVGDLSTLTASEIKTLPIRSPKISNVKRALKGYHEQQVKSRGFEEMVVLEDTE
KPISNVEDKSLSVEEEKLATDLIEPIVVNTNDQPPADLMSQIDALVAQLSAEDLHSYSGS
QLFEMQEKLVGMTNCIMKNLQARWKSPPHENSD
NT seq 6942 nt   +upstreamnt  +downstreamnt
atgagcgctcccgccgccggctccagcctgcagcccctgctggagaccctggaggacccc
gccgccccgccgggggagctcaccgacgcgcacctcacgatcgtcaatcgcttgactggt
gaggaaggcaaaggattcactgcagatgtcagaaaacactttcctcaactctgcaaagtg
tttaaggtacacatttctagtcaaaatgtagagctaagtaatgcagcattgcaggcatta
ggattctgcgtttttaattcaagtattacatctgaattacctgcaactgaaatacgagac
ttgctatcaatagtgaacagtgttgctgtaaaaacttcagacaaaaacactcgcactcgg
gcgctttgggtgatctccaagcagacatttccttctgaaattgttaaaaaagaggtgtcc
ggtattatttctaccctggaaacaatacttactaagggagatgtacagtctatggtggtt
gaatacgaagcgcttaatgttgttatacgcttaatggagcaaactccagcccagatggga
gaagaggctgtgaggtgggcaaaactgatcattcctctggttgtccattcagcgcataag
gtgcagttacgaggtgctactgccctggagatgggcatgccactgctcctccagaaacag
caggaggtagcagccgtcactgaacacctcatgaccacaaaattaatttcagaacttcat
aaactgttttctacaaaaaatgagacatacgtgttaaaattatggccactgtttgtcaaa
ttacttggaaagactctgcatcgtagtggcagttttatcaactcattgctgcaattggag
gaacttggatttcgtagtggctcaccagtggtaaagaaaatagccttcattgcatggaag
agtctaatagataattttgctctaaatccagatatattgtgcagtgctaaaaggctgaag
ttgctaatgcagccactgagctcaatccatgtgagaacagaggctttggccctgacaaag
ctggaggtctggtggtatttactcatgaggctgggacctcagctgcctgccaactttgaa
caggtttgtgtaccattaatccaaagtactttaagtctggattcttctcctgcattgcaa
ggaactccctcacgtgtaccaggcaaccagagtttagtctgtgcaacccctgtacagaaa
tcaggtccgtacccattcgcaagtccggccacaccaaggatgaacttgaattccagcaca
gcaggactggtggtgattccttccattcagcttttgggaattgaaatgctgcttcacttc
ctgatgggaccagaagttttagattttgctaagcaaaacaaacttgtgcttagtttagag
cctctccagtacccgctgattggtagcccttcttttttttgtaagcatgccagcacactt
atcagcgcagttcaggatggctttattgcaattggaaaagaagttcctgattgtatgctg
aatgttatatggaaggacataaatggatacgtgaaaacagccattgaatcaggaaataag
aaagaaaagcaagggtcagaaatactgactatgttgctccaggccttaaaaaatattgtt
aaatcaaattctcttcctgtgcagaaaatactgtccctcattgatattactgttaaggag
ttgcctccaaaagtgttgggttcaccagcttatcaggttgccgatatggatcttttaaat
ggaacaccagctttgttcttaattcagctgcctttccataacagcctcttgaaatgctgc
gtaacagacgagagattctttgtaattctagaaacgcttgtgggttatgttttgtctggg
cctacgtctcccctggctttcagtgaatctgtgatctgcattattaatcagagtgcaaag
caggtggaaaataaggagcatctttggagaatgtggaggattgttgttaatccgctgacc
gactggattaaccggactaatgaagtaaatcagggggatgcactggagcacaacttcagt
gctgtttacagtgcattgttgctaccagtgtcacagatcttccctgctcagggatttcca
cagccaactatgaaatccttgttgcgcacttggtcagacctgtatagagcatttgctcgc
tgtgctgctttagttgcaacagcagaagaaaacctatgctgtgaagaactttgtgccaaa
ataatatctgggctagaaggtgaaactccagtaatgatttcaatgatggatggtctcacc
catattgtatcagtcatggttgactgcatcaactttgcaccatacggtactaaatatcag
ccaaaacatagatctccacagacacctacagattggtctaagaagaaaaaggagcccctt
ggaaagcttgcctctctgtttaaactcctggtgatgttactaaactctttccatgtgttc
agttccaaagaaatctgttcagaaacattggtctctgttggtccttcaattattgctatt
cttcacaacatcatcagccgcgtttcattgccttcagtgattgggactatgtttgcaatt
ttttcaaaacccctggcagtgttttatgaaagaacaaagcttgctgatgtatctaaagta
tacagtaatcttaacaacaagctggaaaaactcctggccgaggttatccagtgtttacag
tctcactgcactggctcttacgatagcaaactgctggagcagatttcaccgttgctctgt
gtagcatttcagcataagagcaaacagatccacaaccagtgttcccacttctggaatgca
acgttctcaaagactacatcattgaagtatcctgaagagttgaaatctgtgttaagccaa
gccaaaaagaaaattccactcctcctgcctggttttgaaagcattgagggggccgaagaa
tacagtggtccattttctgacgcgatggaaaattcacagctggatgcaaagataagtgga
atggaagtaaagttgggtcagaaccgaggctctatattggcacagatgagtgaacaaaaa
gacgaagtaaaagacaagtctagtaatgtgcaagtgacatctgcaaagttgaaactagaa
ttttcatcttcaaaggctaaaagtgagatacttttggaagaagagaaatccattgatttt
gtgtatattcctccagaaacaaaagcaagagtactgactgaacgtcaaaaagaagtgctt
aggtcaaagagagttgatattcctgctatgtacaacaatttggatgcatcacaagatagt
accttgttttctcagtacactcaaagccaggaagattctttggaaaaatcatctttaata
gaaaatgcaaaagaagatactaaaaccaagcctcaggaagaaaatgcaaagagtgaagga
tgcaccaacaaatcagataatcctcttaagaatgctgcctatgtgaacaaatcacctctt
actcacctagaagagagctcaactttaaacagtgagggagaatcaagaagggagacaact
gggatgattctggaggagccatcagctggagagggattagaaggaagtactgtggaaacg
gcttcaaaggagctcttagcagggaacgaaaacacttcaaatgttagcaacagttcaact
tcaagtgacataatttctggaacaccacagcctgcaagtcgacggcagtcttttattact
ttggagaaatttggtagttcagagaacagacccttcagcctttcagcattgaatggtata
tcagagatgtccggaggtgcttctatgacaggtaaacaggaaaagactagtgctaaatca
gaaaaatctggagaagaaaataaaaagcctacaaaatctgaacaaatatttactgcaata
cgaaggctgactcgcaggcagagtaaaatggagcaccaagggaataagcagtccaagtca
ttaatcaggtcagaacaagagaaaagcgtacaagagtcttgtgcttcgaaaaatataaaa
aataatctgtcttctgcagtagaagacgtggaacgaagtctccttgctcagtcccaagtt
ctccattctacagaactagaaattaaaagagctgaagatctgatagcagaaacagaaaag
acccaggcattagataccgattctaaagaaaatacacccccagagacgaccgtgtcatcc
gaccaggtcacaagcgatgacagtcaggctccacatgcgtctcctagtcagaaagcacta
agacgttcttcaagacggcggtcagaaactgtagaaagtacagcagctagtcaagataag
gaagatggccaccaaaagagagacagatgcaaagacaacgaaaaatctgggcagaagaag
gtgccacaggctaaagatgatgtatcccaaaagcagaaagcagtttctgggaaagctacg
gaaaatacgaataaagaaagcaacctacacgagagaactgcagaggaccgtaactcagag
gagtctcctgcttcagcaggccctgatgaggaagtgaacaagagtgctaggaggtcagaa
gagaacttgaaggctgacacagaaggtcaagactgtagttcaagtacagcaggtcagaag
atggaacgcccacgataccacacaagaagagcttcacaaggattgctttccagcatagaa
aattcagaggctgatggctctgagggcaaggaagaaagcatgaggaagaaaaggtctgcc
aaagcgaaaaataggagtgattttcttgaaggtaaattaaaagatctacagccgggaagc
catagccatgaggtgtcttcccaaagaaacgaaacaaaggatctgttggaagcaagaaaa
ggtgagctgagctgtgaagtcagcacagatgctgcactgacatctgaaccgtgtggcccg
aagacccaagtgattcccacagatgctagcaaagccatgggatctgccagctcgaagggt
tcatctggtgtgcagaacggcagcgtggaacagaacaagaggcacacactggtggaatcg
gtcaccaacccatgtgtagctgatccagatttgaaagcagcagagaaagatgaagacatt
gtgaagcgaacagttgtagaggactgtcatgcaactgttctgcctgaatctgtacctgca
gcaaatgcttcaggtggtgatctttccttttcacaaatacctgagtgtcagcacaaaaga
agcaaaaggctgaaaaaaccaaagagctgtgactgctgtaacaaaaagtcaaagcaagaa
gtaatgtcgttgactgaattaaaaaatgggaacactcatgaactgagtgagccccaaatc
accccagttcagactcctggaaatacatcagagatgtccagtaattcagattttgacaag
agattgtccatggcaccttgtgcaatgagcactccactgcatcctcctaaggagcctagt
gcccttaacttggaaagagagggatcatctgaggataacctggaaggaaagagctctgta
ctggaggaggatctagaaaatccagtatgtgtagcaggtgaaatcactgactctgtattg
gaaataaaagaacctgctgatgaggatggccaaactgaacagtgtctgtccaagtgtgtg
ccagaggagcctggtggcagcgatctgattgcagggaatcaagatgaagaaccaggagct
acagaggaagaaatcagtctgaatgaacaactggaggagatacctgaggcactggttgat
gttagcaagcctgaggaaaaacagatgaatgagctagaaagcagttgggatgataaagaa
gtagctgagaatgctgtgggagaaatgtgtgttaatcaagataaagagataaaggaggaa
ttagaggaaactgaaattacagtccctcaaaatatggccttggacaaaggagatgcagta
gaaaataacattgtagattcacctcaaaagccggaagatgatgcttctttagtggtagtt
aatgaaagccctaatggtatgcaggcacgctgcatgtggtctccttcagcttctccatct
acaagtattttaaagagaggtgtaaaaagaaatcaagatgatgattccctgtcgcccact
aataagattcgtcgagtctcttttgcaaatccaatttatcaagaaggactggcagatgac
atagatagaagaagccctgtcattagatcccactcttcaccatcttcccgaagtcttaaa
attttatctaatattcaggccaagcatattaccactccaaccaaaggatttctgtcccca
ggatctcgtaaccctaaatttaagagctcaaagaagtgtttaatcacagaaatgactaag
gagtcactgcctggccccatggaatgcatgtatcctgcgttagttggctgcaaagcgcca
gtcgatgtaattttacctcagattacatcaaacatatgcgccagaggcttggggcagctt
attcgagcaaagaacattaagacagtgggtgatctgagtactttgacagcatcagaaatc
aaaactcttcccatccgctctccgaaaatttccaatgttaaaagagctctgaaaggctat
catgagcaacaggtaaaatctcgaggatttgaggaaatggtagtgcttgaagacacagag
aagcctataagtaatgtagaagataaatctctttctgtagaggaagaaaaacttgcaaca
gatttgattgaacccattgtcgtgaacacaaatgaccagccccctgcagatctgatgagc
cagattgatgcgcttgttgctcagctgagcgctgaagaccttcacagctattcaggcagc
cagctttttgagatgcaagaaaaacttgttggcatgacaaactgtatcatgaaaaatctg
caggctcgctggaagtcgccaccccatgaaaattcagattag

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