Strigops habroptila (Kakapo): 115608711
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Entry
115608711 CDS
T08851
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115608711 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shab03021
]
115608711 (TAF5)
03036 Chromosome and associated proteins [BR:
shab03036
]
115608711 (TAF5)
Transcription machinery [BR:
shab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115608711 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
115608711 (TAF5)
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
115608711 (TAF5)
STAGA complex
115608711 (TAF5)
TFTC complex
115608711 (TAF5)
SAGA complex
115608711 (TAF5)
SLIK complex
115608711 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_Nup120_160
PEP5_VPS11_N
CDK5RAP3
RAB3GAP2_N
eIF2A
VID27
Motif
Other DBs
NCBI-GeneID:
115608711
NCBI-ProteinID:
XP_030343801
UniProt:
A0A672TSG5
LinkDB
All DBs
Position
5:69081537..69094043
Genome browser
AA seq
786 aa
AA seq
DB search
MAALHEEPAEVTAVKPDPEAGTPPQPPSAPPAAAAAAPVAPPAAAAEGEAAGSGGEAAPP
KPAAPGPAASPAALDRQTLVAVLQFLRRSNLRESEEILRREARLLGDDLGSAALSPTGAG
LQGIPGGDADSIGGEALLSRVTAAAAIGGNVATVASSSPGVAAVAAVPPGKVGGSVVVED
QPDVSAVLSAYNQQGDPTLYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYN
QHESEAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSY
QLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVFF
GLLKEPEFDVPLDDEDEEGENEEGKPKKKKPKKDSVGSKSKKQDPNAPPQNRIPLPELKD
SDKLDKVMNMKEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITDDSSMIVGGFADSTV
RVWSVTPKKLRSVKTAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPD
RNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWAT
DHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTIRLWDVLNGNCVRIFTGHKGPIHS
LAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVYALRFSRDGEILASGSMDNT
VRLWDAVKAFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVVHLHFTRRNLLLAA
GAYSSQ
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggcggccctgcatgaggagccggcggaggtgacggcggtaaagccggatcctgaggcg
gggacgccgccacagccccccagtgctcctccagccgccgccgccgccgctcccgtcgct
cccccggctgcggcggcggagggagaggcggcggggagcggtggggaggcggcgccccct
aagcccgcggcaccgggcccggccgcctccccggcggcgctggaccggcagacgctcgta
gctgtgctgcagttcctgcggcgtagcaacctccgcgagtccgaggagatcctgcgccgc
gaagcacgcctgctcggcgatgacctcggttccgcagccctcagccccactggcgccggg
cttcagggaatcccgggtggcgatgcggattccatcggcggcgaggcgctgcttagccgg
gttaccgccgctgccgcgataggaggcaatgtcgccactgtcgcgtcttccagccccggg
gtggcagcggtcgcagccgtgccgccggggaaagttggaggaagcgttgttgtggaagat
cagccagatgtgagtgcagtactgtctgcctacaatcaacagggagacccgactctgtat
gaggaatactacagtggattaaaacacttcattgagtgttctctggactgtcatcgagcg
gaattgtctcagctattttatcctctctttgtgcacatgtacttggaattggtctacaat
caacatgagagtgaagctaagtctttttttgaaagatttcatggggatcaggagtgctat
taccaggatgacctgcgtgtgttatccagtttaaccaaaaaagaacatatgaaaggtaac
gagaccatgctggatttccgaacaagcaagtttgtgctgcgcatttcccgtgactcttac
cagctcttgaagaggcatcttcaggaaaagcagaacaatcagatctggaacattgttcag
gagcatctttacattgacatctttgatggaatgcctcgcagtaaacaacagatagatgct
atggttggaagcttggctggggaggcaaaacgagaggctaataaagcaaaggttttcttt
gggttattgaaagaaccggagtttgatgtgcctttggatgatgaagatgaagaaggagaa
aatgaggagggaaagccaaagaagaaaaaacctaaaaaagatagtgtagggtcaaaaagt
aaaaaacaggaccctaatgctcctccccaaaacagaattcctctgcctgaactgaaagac
tctgacaagctggataaagtcatgaatatgaaggaagctgcacggcgtgtgcgccttggc
ccagagtgcctgccctccatctgtttctacacatttcttaatgcttaccagggtctgact
gcagtggatattacagatgactctagcatgattgtgggaggctttgctgactctactgtc
agagtgtggtccgtgactccaaaaaagctgcgtagtgtgaaaacagcagcagacctaagt
ctcattgacaaagaatcagacgatgtcttggagaggatcatggatgagaaaacagcaagt
gagttgaagattttatatggtcacagtggacccgtctatggcaccagcttcagtcctgat
aggaactatctcttgtcctgttctgaggatggcactgtcagattgtggagtctccaaaca
ttcacgtgtttggtgggatataaaggacacaactacccagtatgggatacacagttctct
ccttacggttattactttgtgtcagggggacatgacagagtggctcgtttgtgggcaaca
gatcactaccagcctttacggatatttgctggtcatcttgctgacgtgacgtgtacccga
ttccatccaaactccaactatattgccacaggctcagcagacaggacaatacggctctgg
gatgttttgaatgggaattgtgtcagaatattcacgggacataagggaccaattcattca
ctagcattttctcctaatggacgattcctggccactggagcaacagatggaagagttctg
ttgtgggacattggacatggcttgatggttggagaattgaaagggcacaccgacaccgtc
tacgcgctgagattcagtagagatggagagattttagcatcaggctcaatggataacaca
gttcgcctgtgggatgctgtgaaagcatttgaagatttagaaaccgatgactttactaca
gccactggacatataaacttgcctgaaaactcacaggacttgttactaggtacatacatg
accaaatcaactccggttgtacacctgcattttacacgcagaaacttgctgctggctgca
ggagcctacagttcacagtga
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