Strigops habroptila (Kakapo): 115608738
Help
Entry
115608738 CDS
T08851
Symbol
SORCS3
Name
(RefSeq) VPS10 domain-containing receptor SorCS3 isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115608738 (SORCS3)
Membrane trafficking [BR:
shab04131
]
Endocytosis
Others
Others
115608738 (SORCS3)
Endosome - Lysosome transport
115608738 (SORCS3)
Endosome - Golgi transport
115608738 (SORCS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
115608738
NCBI-ProteinID:
XP_030343890
UniProt:
A0A672TTQ8
LinkDB
All DBs
Position
5:70050725..70350183
Genome browser
AA seq
1201 aa
AA seq
DB search
MEKGTNCFPTCHTIFLAWTWLLLLSWCCTGAEITCRSCSSPSPSWPASSSRLRQEQRSPP
PPRGLRSWPGGRARGSAGAEPLPGGEPGGRAGPRGAPLRSAGAGGGAPGGRGPAAPRSRR
SSEGRSRGVPAAEGQRGGRAQARGPLEEGRAARLRGAEELRLSSTTFALTGDAAHNQAMV
HWSGHNSSVILILTKLFDFNLGSVTESSLWRSTDYGTTYEKLNDKVGLKTVLSYLYVSPT
NKRKIMLLSDPEIESSILISSDEGATYQKYRLNFYIQSLLFHPKQEEWILAYSLDQKLYS
SMDFGRKWQLMHERVTPNRFYWSVAGLDKEPDLVHMEARTADGHTHYLTCRIQECSETKR
SGPFSRSIDISSLVVQDEYIFIQVTAGGRANYYVSYRREPFAQIKLPKYSLPKDMHIIST
DEDQVFAAVQEWNQNDTYNLYISDTRGVYFTLALENVKSSRGLEGNIIIELYEVAGIKGI
FLANRKIDDQIKTFITYNKGRDWRLLQAPDTDLRGDPVVCHLPFCSLHLHLQLSENPYSS
GSISSKETIPGLLVATGNIGSELSYTDVGMFISSDGGNSWRQIFEEEYNVWFLDWGGALV
ALKHTSVPIRHMWVSFDEGRSWSKYSFTSTPLFVDGSLVDPGIETQIMTVFGHFSLRSEW
QLVKVDYKSIFNRRCNKDDYQTWHLHNQGEPCVMGERKIYKKRKPGAQCSLGRDYSQTVV
SEPCVCGQGDFECDYGYERHSNNQCVPAFWFSPSSLSKECSMGQSYLNSTGYRRIVSNNC
TDGLREKYMAKVEKCPGKAPRGLHILTTDGKLVTEQGHNATFIILMEEGDPQRTNIQLDF
GDGIAVSYANFSPVEDGIWHVYKSAGIFQVMAYAENSLGSDTAVLFLHVVCPVEHVQLSV
PFVAIRNKDVNITAVVWPSQAGTLTYFWWFGNSTKPLITLENSISYVFTVEGMNTVTVQV
AAGSTLTQDTKEIAVHEYFQSQLLSFSPNLDYHNPDIPEWRQDIGKVIKRALAQVTGIPD
EQILVAVFPGLPTSAELFILPHKNTTERRKSSEADLEQVVEILFNALNQNLVQFELKPGV
EVIVYVTQLTLAPLVDSSTGHSSSAMLMLLSVVFVGLAVFLIYKFKRKIPWINIYAQVQH
DKEQEMIGSVSQSENAPKITLSEFTDPEELMDKEVDTRVMGSISTIANSESTKEIPNCTS
V
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggggaccaactgctttccgacctgccacaccatttttctcgcctggacatgg
ctcttactcctgtcttggtgttgcaccggtgccgaaataacttgcagatcctgctcgtct
ccatcgccctcctggccggcatcctcgtctcgccttaggcaggagcagcgttcgccgccg
ccgccgcggggattacggagctggccgggcggccgggcgcggggctcggccggcgcggag
ccgctgccgggcggggagccggggggccgcgcggggccgcggggagcgccgctccgctcg
gcgggggcgggaggcggcgcgcccgggggccggggcccggcagcgccgcgaagccggcgg
agcagcgaggggcgctcccggggggtgcccgcggccgaggggcagcgcggcggccgggct
caagcccgcggaccgctggaggaggggagagcggcgcggctgcgaggggcagaggagctg
aggctgagcagcaccaccttcgcgctcaccggggatgcggcgcacaaccaagctatggtg
cactggtccggccacaacagcagcgtgattctcattctgacaaagctcttcgacttcaac
ttggggagtgttacagagagttcactgtggaggtcaacagactatggcactacctatgaa
aagctaaatgacaaagtaggcctgaagactgtgctgagctacctttatgtcagtcccact
aacaagaggaagatcatgcttcttagtgatccagagattgagagcagcatcctcatcagt
tctgatgaaggggctacctaccagaagtaccgtctgaacttctatatccagagcttgctt
ttccatcccaagcaggaggagtggatcttagcctacagtctggatcaaaagctgtacagc
tccatggactttggaagaaaatggcagctcatgcatgagcgggtcactccaaacaggttt
tactggtcggtggctggtttggataaagaacctgaccttgtgcacatggaagcccggact
gctgatggacacacacactatttgacctgtcggatccaagagtgttcagagaccaaaagg
agtgggccattctcacgctccattgacatcagctctcttgttgttcaggatgaatatatc
ttcatccaggtgacagctggtggaagagcaaattactacgtgtcttacagacgggagcct
tttgcacagattaaattgcccaaatactctcttcctaaggacatgcatattatcagcaca
gatgaagatcaggtgtttgcagctgttcaagagtggaaccagaacgacacatacaatctg
tatatctcagacacccgaggggtgtacttcaccctggccttggaaaatgtgaaaagcagt
cgaggactggaggggaatatcattattgaactttatgaggtagcagggatcaaaggcata
ttcctggctaacaggaagatagatgaccaaatcaagactttcattacctacaataagggc
agagactggcgtttgctgcaggcaccggacaccgatctaagaggggatcctgtagtttgc
cacctgcccttttgctcattgcacttacatctgcaactctcagagaatccatattcttca
ggaagcatttccagcaaagagacaattcctgggctgctggtggcaacaggcaatattggc
tctgaactgtcctacactgatgttggcatgttcatctcttctgatggtggaaattcctgg
agacagatcttcgaggaggaatacaacgtgtggtttctggactggggaggggcactagtg
gccttgaaacacacgtcagtgcccatccggcacatgtgggtgagttttgatgagggaaga
tcttggagtaaatacagtttcacatcaacaccactttttgtggatggatcccttgtagac
cctggcatagagacccagataatgacagtttttgggcacttcagtctccgttctgaatgg
cagctggtcaaggtggactataagtcgatcttcaaccgaaggtgtaacaaagatgactac
caaacctggcatttgcacaatcagggagagccttgtgtcatgggagagaggaagatctac
aaaaaacgcaagcctggagcccagtgttccctaggtcgggactactcccaaactgttgtg
tctgaaccatgtgtctgcggtcagggggactttgagtgtgactatgggtacgagagacac
agcaacaatcagtgtgtcccagccttctggttcagcccgtcctccctgtccaaggagtgc
agcatgggtcagagctacttgaatagcacggggtaccgaaggattgtgtctaacaactgc
acagatggcttgcgggagaagtacatggccaaggtggagaaatgccctggaaaagcacct
cgtggactgcacatcctcactactgatggaaagctggtcacagagcagggacataatgcc
accttcatcatccttatggaagagggcgatccccaaaggacaaacattcagcttgatttt
ggagatggcattgcagtatcctatgctaatttcagccctgttgaggatggcatctggcat
gtctataagagcgctggaatctttcaggtgatggcatatgcagagaacagcctgggatcc
gacactgctgtcctcttcctgcatgtagtctgtccagtggagcatgtccaactgagtgtt
ccttttgtcgccatcagaaataaggacgtcaacattactgcagtagtttggcccagccag
gcaggcacacttacctacttctggtggtttggtaacagcaccaagcccctcatcaccttg
gagaacagcatctcatacgtcttcactgtggaggggatgaacactgttactgtgcaagtt
gctgcaggcagtaccctcacccaagacaccaaggagatcgcagtgcatgagtatttccaa
tctcagctcctgtcattttctcccaacttggactaccataaccctgacatccctgaatgg
agacaagacattggcaaagtcatcaagagagctctagcacaggtcactggtatccctgat
gaacagatcttggtagctgtgtttcccgggctacctacttctgctgaactcttcatactg
ccccataaaaacacaacagagaggaggaaaagcagcgaggctgatctggagcaagtggta
gaaatcctttttaatgctctcaaccagaacctggtccaatttgaactgaagcctggtgtt
gaagtcattgtgtatgttactcagttaacattagcaccccttgttgattccagcacgggt
cacagcagttcggcgatgctgatgttgctgtctgtggtgttcgtaggcttggctgttttt
ttaatctacaaattcaagaggaaaatcccttggattaacatctatgcccaagttcagcat
gacaaggagcaggaaatgattggctctgttagccaaagcgaaaatgcccccaaaatcact
ctgagtgagttcacagaccccgaggagctgatggacaaagaggtggacactcgagtgatg
ggaagcatctcaacaattgccaacagtgaaagcacaaaggaaatccccaactgcactagt
gtttaa
DBGET
integrated database retrieval system
