Strigops habroptila (Kakapo): 115608805
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Entry
115608805 CDS
T08851
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115608805
Membrane trafficking [BR:
shab04131
]
Protein recycling
Others
Others
115608805
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
115608805
NCBI-ProteinID:
XP_030344013
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Position
5:complement(70855653..71144598)
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AA seq
1257 aa
AA seq
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MEKVAGWYPAWHVALLYWTWLFLFTFGFTGAEITCRSCHSQVKPQQQHPQQGLLMHLRTD
RGEKEQRRFPGKKGGERGQGAGMEAEDARLQANLSPAPPGTKFSGWETRRVTRDTEKVAG
ESRPRAAAAPAEDQPLRGRGSPAPGGRPGSVRRRRGRSPRGAAGREPGEAGAARFGLEEL
RLGSTTFALAGDSAHNQAMVHWSGHNSSVILILTKLYDYNLGSITESSLWRSTDYGTTYE
KLNDKVGLKTILSYLYVCPTNKRKIMLLTDPEVESSLLISSDEGATYQKYRLNFYINSLL
FHPKKEDWILAYSQDQKLFSSVEFGRRWLLLHEQVAPNRFYWSMMGSGREPDLVHLEAKT
VDGHAQYITCKMQNCSEATHGKPFPGYIDRNSLIVQDDYVFVQLTSGGRPHYYVSYRRNA
FTQMKLPKYSLPKDMHVISTDENQVFAAVQEWNQNDTYNLYISDTRGVYFTLALENVKSS
QGLEGNVMIDLYEVAGIKGMFLANKKIDNQVKTFITYNKGRDWSLLQAPNTDLRGNPIHC
LLPYCSLHLHLKVSENPYTSGNIASRDTAPSIIVASGNIGTELSDKDISMFVSSDAGNTW
RQIFEEEHSVLYLDQGGVLVAMKHTSLPIRHLWLSFDEGRSWSKYSFTSLPLFVDGVLGE
PGEETLIMTVFGHFSHRSEWQLVKVDYKSIFDRRCEEEDYRPWQLHSQGEACIMGAKRIY
RKRKSEKKCMQGKYAGAMTSEPCVCTEADFDCDYGYERHSNGQCLPAFWYNPSSLSKDCS
LGQSYLNSTGYRKVVSNNCTDGVRERYTAKPQQCPGKAPQGLHIITSDGKLTAEQGHNVT
FLVQLEEGDLQRSLIQVDFGDGIAVSYANLSSTEDGIKHIYQNVGIFRVTVMVENSLGSD
NAVLYLHVTCPLEHVHLSLPFVTTKNKEVNATAVLWPSQVGTLTYVWWFGNNTEPLITLE
GSITFTFSVEGMNTITVQVSAGNTILQDTKTIAVYEQFRSLRLSFSPNLDDYNPDIPEWR
RDISRVVKRALVEATGISSKHILVAVLPGLPTSAELFILPYREATAENKRTSADLEQISE
RLIQKLNQNLVHFELKPGVRILVHAAHLTTAPLVDLTPSHSGSAMLMLLSVVFVGLAVFV
IYKFKRKIPGLNIYAQMQNEKDQEMVSPVSQRESIPNIPQSELMSPEQLVDEKLEVQPIE
QPQATVQNPRKGNATKVVWTEDFQKACGSPRGFKPRPGAEVFPQLLSPRAQKKSLPM
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagttgctggctggtacccagcctggcacgttgctctcctatactggacatgg
cttttcctcttcacttttggctttaccggtgcagaaataacttgcagatcctgccattcc
caggtgaagccgcagcagcaacatccgcagcagggattactaatgcatttgaggaccgac
agaggagaaaaggagcagaggagattccccgggaagaagggaggtgagagagggcaaggg
gccgggatggaggcggaggatgccaggctgcaagcgaacctctctccagctcccccgggg
acgaaattcagcggctgggagacccggcgagtgaccagggacaccgagaaagtggctggg
gagagccgaccccgagcggcggcggctcctgccgaggaccaacctcttcgcggccggggc
tcccccgcgccgggcggccggccggggtcggtgcggcggcggcggggccgcagcccgcgg
ggcgcggcggggcgggagccgggggaggccggcgccgcccgcttcgggctggaggagctg
cggctgggcagcaccaccttcgcccttgccggcgactcggcgcacaaccaagccatggtg
cactggtccgggcacaacagcagcgtgattctaattctgacaaagctgtatgactacaac
ctgggaagcatcacagagagctctctttggaggtcaacagattatgggacaacgtatgag
aaattgaatgataaagtcggtctgaagactattttgagctacttgtatgtttgtccaaca
aacaaacgtaagattatgctgctgactgatccagaagttgagagcagcttattaatcagt
tctgatgaaggggctacctatcaaaaataccgtctgaacttctatatcaacagtctgctc
ttccaccccaagaaggaagattggatcttagcatacagccaagatcagaagttattcagt
tcagtggagtttggcagaagatggctgcttcttcacgagcaagttgcaccaaacagattc
tactggtctatgatggggtctggtagagagcctgatctcgtgcacctggaggcaaagaca
gtggatggtcatgcccagtacatcacctgcaagatgcagaactgcagtgaagccactcac
ggcaagccctttccaggctatattgaccgtaattccctgattgtccaggatgattatgtc
tttgttcagttgacatcaggagggagaccacattattacgtttcttataggaggaatgca
tttacacagatgaagctgccaaagtactccttgcccaaggacatgcatgttatcagcaca
gatgagaatcaggtgtttgcagctgtacaagagtggaaccagaacgacacatacaatctg
tatatctcagacacccgaggggtgtacttcaccctggccttggaaaatgtcaagagtagt
caaggtctggaggggaatgtgatgattgacctctatgaggtagcagggataaagggaatg
ttcttggctaacaagaagattgacaaccaagtgaaaactttcatcacctacaataaaggg
agagactggagtttgttgcaggctccaaacactgatctgagaggaaaccccattcactgt
ctcctgccctattgctcccttcatcttcacctgaaggtctcagagaatccctatacctca
ggaaacatcgccagccgagacactgcccctagtattattgtggcatcaggcaatataggc
actgaactatcagacaaggacatcagcatgtttgtttcttctgatgctgggaacacttgg
agacagatctttgaggaagagcacagtgttctgtacctggatcaaggtggagtactggtt
gccatgaaacacacatctctgcctatcagacatctctggttaagttttgatgaagggaga
tcttggagcaagtacagtttcacatccctcccactgtttgtagatggagttttaggggaa
cctggagaggaaactctcatcatgacagtgtttggacatttcagccaccgctcagagtgg
cagctggtgaaagtagactacaagtccatttttgatcggaggtgtgaagaagaggactac
aggccttggcaactccatagccagggagaagcttgcatcatgggagcaaaaaggatctac
aggaagcgcaagtcagagaagaaatgcatgcaaggaaaatatgctggggctatgacctcg
gagccatgtgtgtgcacagaggcagattttgactgtgattatggatatgaacgtcacagc
aatgggcagtgtttaccagcattttggtataatccatcttccttgtcgaaagactgtagc
cttggacagagttatctcaacagcactggataccggaaagttgtttctaataactgcacg
gatggcgtgagagaacggtacacagcaaaaccacagcaatgccctggcaaagccccccag
ggccttcacataattacgtctgatggcaaactgacagctgagcaagggcacaatgtcact
ttcctggtgcagctggaggagggagacctccagagatccctcattcaggtggattttgga
gatggcatcgctgtgtcatatgccaatctcagctcaacagaagatgggatcaagcacatc
taccagaatgtgggcatattccgagtgactgtgatggtggaaaacagcctgggttctgac
aatgctgtcctctacctgcatgtaacatgccccttggaacatgttcacttatctctacca
ttcgtcaccacaaagaacaaggaggtcaatgccacagcagtactgtggccgagccaagtg
ggaacgcttacttatgtctggtggtttgggaacaacacagagccactgatcacattggaa
gggagcatcacattcacgttttctgtggaagggatgaacaccatcactgttcaggtctca
gcagggaacacaattcttcaggacacaaagactattgctgtgtatgagcaatttcggtcc
ctgcggttatcattctctccgaatctggatgactacaacccagatatccctgagtggaga
agggacatcagtagagtagtcaagagagctctggtggaggcaacaggtatttcaagcaag
catattctggtcgcagtgctccctggtctacccacatctgctgaactcttcattttacca
tatcgagaggccacagcagaaaataaaagaacatcagcagacctagagcagatttcagaa
agactgatccagaaactgaaccaaaacctggtccattttgagttgaagccaggagttcga
atccttgtccatgctgcccatttaacaacagctcccctggtggacctcactcccagtcac
agtggttcagctatgctgatgctcctctctgttgtttttgtgggactagctgtctttgta
atctacaagttcaaaaggaagattcctggccttaatatatatgcacagatgcagaatgaa
aaagatcaagagatggtcagtccagtcagtcagagggaaagcatacctaatatccctcaa
agtgagctgatgagccctgagcaactagtagatgagaagttggaagtccagcccatagag
caacctcaggccacagtccagaacccaaggaaaggaaatgcaaccaaggtagtctggaca
gaggacttccaaaaggcttgtggatcaccaagaggtttcaagccaagacccggagcggaa
gtatttccacagctgctgagtcccagagcacaaaagaaatccctacctatgtaa
DBGET
integrated database retrieval system
